e014210 | Alfonso Muñoz-Pomer | 20 March 2018, 16:14:15 UTC | 4.0.0 | 20 March 2018, 16:14:15 UTC |
4b9f574 | Alfonso Muñoz-Pomer | 20 March 2018, 16:13:22 UTC | Update after latest bump of ReactHighcharts and Highcharts | 20 March 2018, 16:13:22 UTC |
ba92f75 | Alfonso Muñoz-Pomer | 20 March 2018, 16:12:22 UTC | Reindent | 20 March 2018, 16:12:22 UTC |
528f70c | Alfonso Muñoz-Pomer | 20 March 2018, 16:11:56 UTC | Use SUFFIX strategy properly | 20 March 2018, 16:11:56 UTC |
57f9c87 | Alfonso Muñoz-Pomer | 20 March 2018, 16:11:14 UTC | Highcharts 5 breaks when plotting boxplots with logartihmic axes [#155903247] | 20 March 2018, 16:11:14 UTC |
3826825 | Alfonso Muñoz-Pomer | 19 March 2018, 17:21:14 UTC | Show leading and trailing rows in dominant transcripts heatmap, even if there is no data [#156100802] | 19 March 2018, 17:21:14 UTC |
872e34e | Alfonso Muñoz-Pomer | 16 March 2018, 19:35:18 UTC | 3.16.0 | 16 March 2018, 19:35:18 UTC |
62096aa | Alfonso Muñoz-Pomer | 16 March 2018, 19:35:04 UTC | Fix multiexperiments test page | 16 March 2018, 19:35:04 UTC |
c11a686 | Alfonso Muñoz-Pomer | 16 March 2018, 19:32:38 UTC | Change background of the heatmap depending on the type (experiment or multiexperiment) [#156049411] | 16 March 2018, 19:32:38 UTC |
76c53d2 | Alfonso Muñoz-Pomer | 16 March 2018, 19:31:33 UTC | Add parameter to data series legend to change the text for the missing values [#156054565] | 16 March 2018, 19:31:33 UTC |
d873f92 | Alfonso Muñoz-Pomer | 15 March 2018, 20:15:37 UTC | 3.15.0 | 15 March 2018, 20:15:37 UTC |
0e77c38 | Alfonso Muñoz-Pomer | 15 March 2018, 20:05:24 UTC | Display boxplots even if there are only “loose points” (it becomes a regular scatter plot); remove should display hack, it’s not giving us much and it only complicates reasoning about the component | 15 March 2018, 20:15:07 UTC |
10dd410 | Alfonso Muñoz-Pomer | 14 March 2018, 12:23:58 UTC | 3.14.0 | 14 March 2018, 12:23:58 UTC |
26eaa88 | Alfonso Muñoz-Pomer | 14 March 2018, 12:23:43 UTC | Make transcripts boxplot table be able to draw 0s on log axis [#155736631] | 14 March 2018, 12:23:43 UTC |
dfbca6b | Alfonso Muñoz-Pomer | 14 March 2018, 10:53:59 UTC | 3.13.0 | 14 March 2018, 10:53:59 UTC |
6cc5f64 | Alfonso Muñoz-Pomer | 14 March 2018, 10:52:46 UTC | The dominant transcripts table now displays assays instead of replicate [#155818609] | 14 March 2018, 10:52:46 UTC |
cdf1206 | Alfonso Muñoz-Pomer | 14 March 2018, 10:51:49 UTC | Move away from Yarn and go back, like the prodigal son, to NPM | 14 March 2018, 10:51:49 UTC |
23905a9 | Alfonso Muñoz-Pomer | 05 March 2018, 16:58:34 UTC | 3.12.0 | 05 March 2018, 16:58:34 UTC |
e2582b2 | Alfonso Muñoz-Pomer | 05 March 2018, 16:58:05 UTC | Make webpack-dev-server serve the bundles from /gxa/resources/js-bundles to see the Anatomogram in the demo pages | 05 March 2018, 16:58:05 UTC |
f0ca30b | Alfonso Muñoz-Pomer | 05 March 2018, 16:55:08 UTC | Pass atlasUrl to the Anatomogram component so we can see it in the HTML demo pages | 05 March 2018, 16:55:08 UTC |
3acceb8 | Alfonso Muñoz-Pomer | 02 March 2018, 16:55:03 UTC | 3.11.0 | 02 March 2018, 16:55:03 UTC |
3db8704 | Monica Jianu | 02 March 2018, 16:53:05 UTC | Task 154798620 (#8) * Changed default gene query and experiment accession IDs in the experiment picker page. [#154798620] * Inverted axes for boxplots and heatmap charts. [#154798620] * Changed legend item label from Present to Non-dominant in the heatmap chart. Added line breaks in the tooltip. [#154798620] | 02 March 2018, 16:53:05 UTC |
3d1ee04 | Alfonso Muñoz-Pomer | 29 January 2018, 18:29:08 UTC | v3.10.1 | 29 January 2018, 18:29:08 UTC |
8b640ca | Alfonso Muñoz-Pomer | 29 January 2018, 17:57:16 UTC | Add gene name (or ID if name isn’t available) as part of the transcripts charts titles [Finishes #153596122] | 29 January 2018, 17:57:16 UTC |
155717d | Alfonso Muñoz-Pomer | 26 January 2018, 00:03:49 UTC | v3.10.0 | 26 January 2018, 00:03:49 UTC |
6542371 | Alfonso Muñoz-Pomer | 26 January 2018, 00:03:36 UTC | Update to latest dependencies | 26 January 2018, 00:03:36 UTC |
052003b | Alfonso Muñoz-Pomer | 25 January 2018, 23:51:29 UTC | Remove superfluous div | 25 January 2018, 23:51:29 UTC |
58da55b | Alfonso Muñoz-Pomer | 24 January 2018, 15:36:46 UTC | 3.9.0 | 24 January 2018, 15:36:46 UTC |
5c32540 | Alfonso Muñoz-Pomer | 24 January 2018, 14:52:19 UTC | v3.8.0 | 24 January 2018, 14:52:19 UTC |
325bd42 | Alfonso Muñoz-Pomer | 24 January 2018, 14:52:09 UTC | Update dependencies | 24 January 2018, 14:52:09 UTC |
8a0c7c3 | Alfonso Muñoz-Pomer | 24 January 2018, 14:51:37 UTC | Missing, non-expressed values are plotted in grey; add custom data series legend [Finishes #153595923] | 24 January 2018, 14:51:37 UTC |
a1d4b8d | Alfonso Muñoz-Pomer | 24 January 2018, 14:50:49 UTC | Parameterize DataSeriesHeatmapLegend to reuse it in the dominant transcripts heatmap [#153595923] | 24 January 2018, 14:50:49 UTC |
f248879 | Alfonso Muñoz-Pomer | 23 January 2018, 17:24:42 UTC | Make code more ES6-idiomatic and change colour scheme in dominant transcripts heatmap [Finishex #153595923] | 23 January 2018, 17:24:42 UTC |
5573cf8 | Alfonso Muñoz-Pomer | 23 January 2018, 16:28:06 UTC | Reformat code | 23 January 2018, 16:28:06 UTC |
4fe4e5b | Alfonso Muñoz-Pomer | 23 January 2018, 13:55:16 UTC | Change text to switch between single gene heatmap and boxplots [Finishes #153596379] | 23 January 2018, 13:55:16 UTC |
66442b7 | barrera | 13 December 2017, 14:11:23 UTC | 3.7.9 | 13 December 2017, 14:11:23 UTC |
90a354a | barrera | 13 December 2017, 12:22:18 UTC | Merge remote-tracking branch 'origin/master' | 13 December 2017, 12:22:18 UTC |
99559c4 | barrera | 13 December 2017, 12:22:01 UTC | Change naming on heatmap orderings | 13 December 2017, 12:22:01 UTC |
0549718 | wbazant | 12 December 2017, 12:12:06 UTC | 3.7.8 | 12 December 2017, 12:12:06 UTC |
33ed8a4 | wbazant | 12 December 2017, 12:11:44 UTC | Dominant transcripts, also with a sweet table | 12 December 2017, 12:11:44 UTC |
e89642f | wbazant | 11 December 2017, 17:28:09 UTC | Colors and legend | 11 December 2017, 17:50:41 UTC |
27d5326 | wbazant | 11 December 2017, 15:12:56 UTC | Dominant transcripts now work | 11 December 2017, 15:12:56 UTC |
5aae9d6 | wbazant | 11 December 2017, 12:54:40 UTC | Partial result | 11 December 2017, 12:54:40 UTC |
03190f6 | wbazant | 11 December 2017, 12:05:37 UTC | Realize I am showing the wrong data LOL (there should be at most one dominant transcript per assay group, I did a wrong calculation - current number is essentially 1 / how many assays each thing has) | 11 December 2017, 12:05:37 UTC |
823fd44 | barrera | 11 December 2017, 11:29:29 UTC | Merge branch 'master' into task_152038824 | 11 December 2017, 11:29:29 UTC |
8ba7738 | wbazant | 07 December 2017, 16:25:02 UTC | Execute a todo | 07 December 2017, 16:25:02 UTC |
9f110d0 | wbazant | 07 December 2017, 16:13:55 UTC | Have a title with the gene name, and 'Gene expression' over the gene expression | 07 December 2017, 16:13:55 UTC |
4713cb6 | wbazant | 07 December 2017, 15:57:47 UTC | Fix - correspond to payload as produced by JsonBaselineGeneInExperimentController (zeroday mistake I think, i.e. never worked) | 07 December 2017, 15:57:47 UTC |
de782ac | wbazant | 07 December 2017, 15:42:51 UTC | Do not draw boxplot if no data (instead of failing everything) | 07 December 2017, 15:42:51 UTC |
19e34a8 | barrera | 04 December 2017, 10:52:32 UTC | minor changes | 04 December 2017, 10:52:32 UTC |
7de807d | barrera | 27 November 2017, 15:11:55 UTC | Pass the currentTab as props to the checkboxes to know when all o none of the checkboxes must be selected | 27 November 2017, 15:11:55 UTC |
30a88a2 | barrera | 27 November 2017, 11:57:39 UTC | When open modal, pick correct selected checkboxes from current values. Fixed behaviour | 27 November 2017, 11:57:39 UTC |
ea94c9e | barrera | 24 November 2017, 17:25:18 UTC | Fixed error managing already selected and selectedCheckboxes set when selecting different options | 24 November 2017, 17:25:18 UTC |
797daec | Gene Expression Atlas | 23 November 2017, 11:54:29 UTC | Update README.md Update licence notes and add mailing list information. | 23 November 2017, 11:54:29 UTC |
e55cd4b | barrera | 22 November 2017, 17:21:44 UTC | Fixed bug in : handle the current checkboxes selected given the currentValues when modal window is open | 22 November 2017, 17:21:44 UTC |
024d1b2 | barrera | 22 November 2017, 17:11:09 UTC | handle the current checkboxes selected given the currentValues when modal window is open | 22 November 2017, 17:11:09 UTC |
f739936 | barrera | 16 November 2017, 17:25:08 UTC | Keep the state of the current checkbox selection | 16 November 2017, 17:25:08 UTC |
94024ee | barrera | 15 November 2017, 17:18:52 UTC | Change Filters tabs to checkboxes. Move All, None tabs to the right of the page. Created new component to handle the checkboxes. Still need to fix behaviour between selection with checkboxes and the tabs and also style it a bit more | 15 November 2017, 17:18:52 UTC |
bf1e7fc | wbazant | 14 November 2017, 13:56:55 UTC | 3.7.7 | 14 November 2017, 13:56:55 UTC |
2b30417 | wbazant | 14 November 2017, 13:56:38 UTC | Add a UI feature: cutoff drawn with a dashed line | 14 November 2017, 13:56:38 UTC |
f6eef37 | wbazant | 14 November 2017, 13:30:06 UTC | Adapt code to the API as in https://github.com/gxa/atlas/pull/42/commits/7487658c826bd3b9181dbf0725f2e5c4fd41dcad | 14 November 2017, 13:30:06 UTC |
a93b4c9 | wbazant | 14 November 2017, 11:39:43 UTC | Decomission prop types accessKey and relUrl - see https://github.com/gxa/atlas/commit/7ae4ebb299e8b322d73e5d01c114e89f3e7631d8 | 14 November 2017, 12:22:52 UTC |
265f7e6 | wbazant | 08 November 2017, 16:37:18 UTC | 3.7.6 | 08 November 2017, 16:37:18 UTC |
72229c5 | wbazant | 08 November 2017, 14:45:06 UTC | Switch to the other way of providing boxplot points - fixes a bug in Highcharts: https://github.com/highcharts/highcharts/issues/7380 | 08 November 2017, 14:45:06 UTC |
5c2c535 | wbazant | 08 November 2017, 14:16:56 UTC | No margin right , don't have tilted axes | 08 November 2017, 14:16:56 UTC |
80cc6d2 | wbazant | 03 November 2017, 14:55:48 UTC | 3.7.5 | 03 November 2017, 14:55:48 UTC |
d0c4311 | wbazant | 03 November 2017, 14:53:01 UTC | The legend is interactive again | 03 November 2017, 14:53:01 UTC |
33560c2 | wbazant | 03 November 2017, 12:58:20 UTC | Come up with a really wholesome hack for #152514757 | 03 November 2017, 12:58:20 UTC |
ec81727 | wbazant | 03 November 2017, 12:52:22 UTC | Delete dead code | 03 November 2017, 12:52:22 UTC |
7bdc891 | wbazant | 03 November 2017, 12:45:35 UTC | Same x axis for the two plots | 03 November 2017, 12:45:35 UTC |
1e618c8 | wbazant | 03 November 2017, 12:43:45 UTC | Colors are now: one transcript - the same to gene expression boxplots many transcripts - all different to gene expression boxplots | 03 November 2017, 12:43:45 UTC |
d081536 | wbazant | 03 November 2017, 12:29:12 UTC | Add data points for where there are no boxplots, to the boxplots. I hoped for this to be a harbringer of a paradigm shift but the requirement to have both boxplots and the data points overlaid on each other has not made it through Axis starts from 0 | 03 November 2017, 12:32:20 UTC |
a85d95e | wbazant | 01 November 2017, 17:22:31 UTC | 3.7.4 | 01 November 2017, 17:22:31 UTC |
3a0dbba | wbazant | 01 November 2017, 17:22:11 UTC | Make the boxplots contain the same data as the heatmap | 01 November 2017, 17:22:11 UTC |
da6322d | wbazant | 01 November 2017, 14:36:30 UTC | 3.7.3 | 01 November 2017, 14:36:30 UTC |
ff375a6 | wbazant | 01 November 2017, 14:36:23 UTC | Remove dead code. Fix. | 01 November 2017, 14:36:23 UTC |
903cb67 | wbazant | 01 November 2017, 12:55:44 UTC | 3.7.2 | 01 November 2017, 12:55:44 UTC |
a7e39d1 | wbazant | 01 November 2017, 12:54:44 UTC | Integrate transcripts under boxplot | 01 November 2017, 12:54:44 UTC |
6dfc92e | wbazant | 01 November 2017, 12:07:33 UTC | Add demo page | 01 November 2017, 12:07:33 UTC |
19bcc0a | Alfonso Muñoz-Pomer | 18 October 2017, 10:34:39 UTC | v3.7.1 | 18 October 2017, 10:34:39 UTC |
e87b3a2 | Alfonso Muñoz-Pomer | 18 October 2017, 10:34:24 UTC | Trim and ellipsify tooltip text if it exceeds 30 characters [Fixes #150630397] | 18 October 2017, 10:34:24 UTC |
d121cf7 | Alfonso Muñoz-Pomer | 17 October 2017, 15:57:02 UTC | v3.7.0 | 17 October 2017, 15:57:02 UTC |
ba83ead | Alfonso Muñoz-Pomer | 17 October 2017, 15:56:42 UTC | Make boxplot Y axis logarithmic | 17 October 2017, 15:56:42 UTC |
ef5a3e5 | Alfonso Muñoz-Pomer | 17 October 2017, 15:56:24 UTC | Use component in a more declarative fashion | 17 October 2017, 15:56:24 UTC |
1062051 | Alfonso Muñoz-Pomer | 17 October 2017, 15:56:08 UTC | Remove payload parameter | 17 October 2017, 15:56:08 UTC |
a73b10c | Alfonso Muñoz-Pomer | 17 October 2017, 15:53:58 UTC | Remove trailing commas | 17 October 2017, 15:53:58 UTC |
308e1a6 | Alfonso Muñoz-Pomer | 17 October 2017, 15:53:45 UTC | Add script to run local webpack-dev-server | 17 October 2017, 15:53:45 UTC |
7b5a164 | Alfonso Muñoz-Pomer | 17 October 2017, 15:53:33 UTC | Make request over HTTPS to suppress CORS header error | 17 October 2017, 15:53:33 UTC |
7007475 | Alfonso Muñoz-Pomer | 19 September 2017, 18:19:48 UTC | v3.6.2 | 19 September 2017, 18:19:48 UTC |
2c2fe25 | Alfonso Muñoz-Pomer | 18 September 2017, 13:18:54 UTC | Be more conservative about when labels are rotated and when they’re not | 19 September 2017, 18:19:21 UTC |
19c5839 | Alfonso Muñoz-Pomer | 13 September 2017, 21:27:10 UTC | v3.6.1 | 13 September 2017, 21:27:10 UTC |
f55e6bd | Alfonso Muñoz-Pomer | 13 September 2017, 21:25:21 UTC | Remove accidental bottom padding | 13 September 2017, 21:25:21 UTC |
3e8ba4d | Alfonso Muñoz-Pomer | 13 September 2017, 21:23:09 UTC | v3.6.0 | 13 September 2017, 21:23:09 UTC |
2bbfa57 | Alfonso Muñoz-Pomer | 13 September 2017, 17:53:39 UTC | Compute margins dynamically, as filters can change the number of columns, labels, etc. | 13 September 2017, 17:55:05 UTC |
1180d1a | Alfonso Muñoz-Pomer | 13 September 2017, 15:50:53 UTC | Remove not very useful less file; add padding below legend (for real) | 13 September 2017, 15:50:53 UTC |
382d013 | Alfonso Muñoz-Pomer | 13 September 2017, 15:36:19 UTC | Add some padding between the legend and the heatmap | 13 September 2017, 15:36:19 UTC |
db511fa | Alfonso Muñoz-Pomer | 13 September 2017, 15:36:02 UTC | Increase minimum right margin; name stuff | 13 September 2017, 15:36:02 UTC |
07b6122 | Alfonso Muñoz-Pomer | 13 September 2017, 14:47:43 UTC | Calculate accurately X axis label width/height to set margins accordingly All this wouldn’t be necessary if Highcharts had the option to set the heatmap cell width/height :( (cherry picked from commit e1f82a7) | 13 September 2017, 14:56:24 UTC |
aa6bd49 | Alfonso Muñoz-Pomer | 12 September 2017, 10:41:44 UTC | Add some extra right margin (cherry picked from commit 7b70d71) (cherry picked from commit a637d2c) | 13 September 2017, 14:56:21 UTC |
2e38397 | Alfonso Muñoz-Pomer | 12 September 2017, 10:43:40 UTC | v3.5.8 | 12 September 2017, 10:43:40 UTC |