| 1cde932 | Jiqiang Guo | 06 March 2013, 21:02:05 UTC | upgrade rstan verion to 1.2.0 | 06 March 2013, 21:02:05 UTC |
| 4c8cf41 | Eric Brown | 06 March 2013, 02:44:48 UTC | Fix Typos in Stan Reference Manual Signed-off-by: Bob Carpenter <carp@alias-i.com> | 06 March 2013, 20:35:43 UTC |
| 7dbf52f | Bob Carpenter | 06 March 2013, 20:28:30 UTC | Merge branch 'master' of https://github.com/stan-dev/stan | 06 March 2013, 20:28:30 UTC |
| f651cf7 | Bob Carpenter | 06 March 2013, 20:28:23 UTC | new acks in doc and new date for 1.2.0 release in web | 06 March 2013, 20:28:23 UTC |
| af1c9a9 | Daniel Lee | 06 March 2013, 20:21:38 UTC | adding treedepth__ to print output | 06 March 2013, 20:21:38 UTC |
| 1f37fbe | Daniel Lee | 06 March 2013, 20:13:00 UTC | Merge branch 'master' of https://github.com/stan-dev/stan | 06 March 2013, 20:13:00 UTC |
| d198b95 | Daniel Lee | 06 March 2013, 20:12:53 UTC | updating chains | 06 March 2013, 20:12:53 UTC |
| bd866ac | Bob Carpenter | 06 March 2013, 19:59:24 UTC | revised boost version in manual | 06 March 2013, 19:59:24 UTC |
| fbf80ba | Bob Carpenter | 06 March 2013, 19:25:41 UTC | fixed matrix tests for lhs vs. rhs calls to getbase1 | 06 March 2013, 19:25:41 UTC |
| 0c41b3e | Bob Carpenter | 06 March 2013, 19:15:30 UTC | removed tabs from code files | 06 March 2013, 19:15:30 UTC |
| 7c589bb | Bob Carpenter | 06 March 2013, 19:14:07 UTC | fixed row assignments for matrices in lhs and rhs, with compiled model tests | 06 March 2013, 19:14:07 UTC |
| 96c273f | Daniel Lee | 06 March 2013, 17:23:00 UTC | updated stan_csv_reader to read nondiag_mass option | 06 March 2013, 17:23:00 UTC |
| 040f8d5 | Daniel Lee | 06 March 2013, 17:18:53 UTC | updating model test fixture to report the corect number of parameters | 06 March 2013, 17:18:53 UTC |
| b958ed0 | Daniel Lee | 06 March 2013, 17:08:59 UTC | updating models/command_test to accept nondiag_mass output | 06 March 2013, 17:08:59 UTC |
| 28d7d69 | Daniel Lee | 06 March 2013, 16:59:25 UTC | Merge branch 'print' | 06 March 2013, 16:59:25 UTC |
| d4a91f4 | Daniel Lee | 06 March 2013, 16:59:09 UTC | changed implementation of chains mean method to use boost's accumulators | 06 March 2013, 16:59:09 UTC |
| 4513c43 | Daniel Lee | 06 March 2013, 16:48:19 UTC | printing in scientific notation | 06 March 2013, 16:48:19 UTC |
| 87db5d1 | maverickg | 06 March 2013, 16:19:35 UTC | rstan: doc for nondiag_mass argument | 06 March 2013, 16:19:35 UTC |
| f3efd51 | Daniel Lee | 06 March 2013, 15:50:53 UTC | added row for lp__ | 06 March 2013, 15:50:53 UTC |
| f45e695 | Bob Carpenter | 06 March 2013, 05:03:23 UTC | Merge branch 'master' of https://github.com/stan-dev/stan | 06 March 2013, 05:03:23 UTC |
| 01254f4 | Bob Carpenter | 06 March 2013, 05:03:16 UTC | reformatted contributed modules section, added author and license for emacs stan-mode | 06 March 2013, 05:03:16 UTC |
| 868551b | Jiqiang Guo | 06 March 2013, 03:29:07 UTC | Merge branch 'master' of https://github.com/stan-dev/stan | 06 March 2013, 03:29:07 UTC |
| ec0a751 | Jiqiang Guo | 06 March 2013, 03:16:29 UTC | rstan: add sampler nuts_nondiag | 06 March 2013, 03:28:36 UTC |
| 6f54faf | Daniel Lee | 06 March 2013, 02:26:01 UTC | quits properly without specifying any files | 06 March 2013, 02:26:01 UTC |
| a022164 | Daniel Lee | 06 March 2013, 00:34:45 UTC | Merge pull request #22 from jrnold/fix/doc fix name for cauchy_cdf function | 06 March 2013, 00:34:45 UTC |
| a949cf0 | Jeff Arnold | 06 March 2013, 00:16:36 UTC | fix name for cauchy_cdf function | 06 March 2013, 00:16:36 UTC |
| 2062d55 | maverickg | 05 March 2013, 22:46:10 UTC | Merge branch 'master' of https://github.com/stan-dev/stan | 05 March 2013, 22:46:10 UTC |
| a93fbc9 | maverickg | 05 March 2013, 22:46:00 UTC | print out nondiag_mass's value into the csv file | 05 March 2013, 22:46:00 UTC |
| 55a2443 | Bob Carpenter | 05 March 2013, 22:11:05 UTC | added more doc for the print command | 05 March 2013, 22:11:05 UTC |
| 6a4ee2d | Bob Carpenter | 05 March 2013, 22:10:51 UTC | added getter methods for mass matrices to nuts diag and nondiag | 05 March 2013, 22:10:51 UTC |
| 6bc9164 | Bob Carpenter | 05 March 2013, 22:09:36 UTC | added --help option to bin/print | 05 March 2013, 22:09:36 UTC |
| 8dd142f | Bob Carpenter | 05 March 2013, 22:08:50 UTC | updated to-do and release notes in prep for 1.2.0 | 05 March 2013, 22:08:50 UTC |
| cd38d12 | Bob Carpenter | 05 March 2013, 22:08:31 UTC | added priors to neg binomial example so it converges | 05 March 2013, 22:08:31 UTC |
| 1d9e7ff | Bob Carpenter | 05 March 2013, 20:41:13 UTC | moved error checking to doubles for simplex in categorical, still not maximally efficient because of alloc of new vector | 05 March 2013, 20:41:13 UTC |
| 9f99331 | Daniel Lee | 05 March 2013, 16:57:56 UTC | Merge branch 'master' of https://github.com/stan-dev/stan | 05 March 2013, 16:57:56 UTC |
| 0969b16 | Daniel Lee | 05 March 2013, 16:57:52 UTC | updating introduction with a subsection on print | 05 March 2013, 16:57:52 UTC |
| a2c0a14 | Daniel Lee | 05 March 2013, 16:56:22 UTC | updating print | 05 March 2013, 16:56:22 UTC |
| f70245f | Bob Carpenter | 05 March 2013, 09:20:30 UTC | added release notes for 1.2.0 and updated to-do | 05 March 2013, 09:20:30 UTC |
| ea9d214 | Bob Carpenter | 05 March 2013, 09:00:45 UTC | added nuts_nondiag to doc and cleaned up code and command print to match | 05 March 2013, 09:00:45 UTC |
| 9b177a5 | Daniel Lee | 05 March 2013, 06:36:24 UTC | adding whitespace to bin/print | 05 March 2013, 06:36:24 UTC |
| 730b8ed | Daniel Lee | 05 March 2013, 06:28:42 UTC | removed references to specialized make targets in windows for the introduction | 05 March 2013, 06:28:42 UTC |
| 8af7024 | Daniel Lee | 05 March 2013, 06:02:08 UTC | allowing windows make targets to be identical to linux and mac | 05 March 2013, 06:02:08 UTC |
| ab28df2 | Daniel Lee | 05 March 2013, 05:51:46 UTC | updating stan_csv_reader | 05 March 2013, 05:51:46 UTC |
| 6d8ecd3 | Bob Carpenter | 05 March 2013, 00:32:54 UTC | updating doc for 1.2 | 05 March 2013, 00:32:54 UTC |
| 65287c4 | Daniel Lee | 04 March 2013, 23:31:06 UTC | updating nuts_massgiven and nuts_nondiag to use commas in the adaptation output | 04 March 2013, 23:31:06 UTC |
| 328a798 | Daniel Lee | 04 March 2013, 23:25:02 UTC | Merge branch 'master' of https://github.com/stan-dev/stan | 04 March 2013, 23:25:02 UTC |
| 9fec10c | Daniel Lee | 04 March 2013, 23:21:41 UTC | updating stan_csv_reader to ignore errors in adaptation | 04 March 2013, 23:21:41 UTC |
| a4ad494 | Bob Carpenter | 04 March 2013, 23:04:03 UTC | updated version numbers to 1.2.0 in docs, stan/version and web sources | 04 March 2013, 23:04:03 UTC |
| 360dcc3 | Michael Betancourt | 04 March 2013, 22:38:23 UTC | Merge branch 'master' of github.com:stan-dev/stan | 04 March 2013, 22:38:23 UTC |
| b5b7bd3 | Michael Betancourt | 04 March 2013, 22:38:06 UTC | Fixed empty vector return value and removed tabs | 04 March 2013, 22:38:06 UTC |
| 508d7e5 | maverickg | 04 March 2013, 22:36:06 UTC | rstan: add BOOST flags to makefiles | 04 March 2013, 22:36:06 UTC |
| c9c544a | Michael Betancourt | 04 March 2013, 22:32:48 UTC | Fixed empty vector return value and removed tabs | 04 March 2013, 22:32:48 UTC |
| 49eef94 | Michael Betancourt | 04 March 2013, 21:53:36 UTC | Merge branch 'master' of github.com:stan-dev/stan | 04 March 2013, 21:53:36 UTC |
| 3722775 | Daniel Lee | 04 March 2013, 21:29:53 UTC | Merge branch 'boost_disable_asserts' | 04 March 2013, 21:29:53 UTC |
| 34775e8 | Daniel Lee | 04 March 2013, 21:29:40 UTC | adding -DBOOST_DISABLE_ASSERTS to build | 04 March 2013, 21:29:40 UTC |
| 4377aaa | Daniel Lee | 04 March 2013, 20:39:33 UTC | moving stan-mode to its own repository | 04 March 2013, 20:39:33 UTC |
| bc97770 | Michael Betancourt | 04 March 2013, 18:47:44 UTC | Typo and formatting fixes | 04 March 2013, 18:47:44 UTC |
| b7d8a27 | Daniel Lee | 04 March 2013, 16:19:13 UTC | Merge branch 'derivatives': partially evaluating univariate derivatives for probability distributions. | 04 March 2013, 16:19:13 UTC |
| 6ef8cc5 | Daniel Lee | 04 March 2013, 16:18:58 UTC | evaluated derivatives for beta_binomial | 04 March 2013, 16:18:58 UTC |
| 13db9df | Peter Li | 04 March 2013, 14:39:13 UTC | added approx chi square goodness of fit test to rng for trunc normal | 04 March 2013, 14:39:13 UTC |
| 61f1094 | Jiqiang Guo | 04 March 2013, 04:17:31 UTC | Merge branch 'master' of https://github.com/stan-dev/stan | 04 March 2013, 04:17:31 UTC |
| 9229add | Jiqiang Guo | 04 March 2013, 04:17:22 UTC | rstan: add "add = TRUE" to on.exit in stan_model | 04 March 2013, 04:17:22 UTC |
| 792fa31 | Peter Li | 04 March 2013, 04:01:06 UTC | added rng to trunc_normal with basic test | 04 March 2013, 04:01:06 UTC |
| 05761b6 | Peter Li | 04 March 2013, 03:14:25 UTC | fixed chi square goodness of fit test for rng in logistic | 04 March 2013, 03:14:25 UTC |
| 3f73625 | Peter Li | 04 March 2013, 03:03:36 UTC | added chi square goodness of fit test to rng for poisson | 04 March 2013, 03:03:36 UTC |
| 4665d6a | Peter Li | 04 March 2013, 01:10:19 UTC | added extra test for rng in neg binom | 04 March 2013, 01:10:19 UTC |
| 1c558ac | Peter Li | 04 March 2013, 01:08:44 UTC | fixed rng for neg binom | 04 March 2013, 01:08:44 UTC |
| a4aeea7 | Peter Li | 04 March 2013, 01:04:35 UTC | added rng to neg binom with chi squared test | 04 March 2013, 01:04:35 UTC |
| fda9dfc | maverickg | 03 March 2013, 23:03:54 UTC | Merge branch 'master' of https://github.com/stan-dev/stan | 03 March 2013, 23:03:54 UTC |
| 75ee207 | maverickg | 03 March 2013, 23:03:37 UTC | rstan: support print generated quantities | 03 March 2013, 23:03:37 UTC |
| a779f8a | Ben Goodrich | 03 March 2013, 22:48:30 UTC | forgot to document one argument in pairs.stanfit() | 03 March 2013, 22:48:30 UTC |
| d851515 | Bob Carpenter | 03 March 2013, 22:20:55 UTC | more TO-DO items from mailing lists | 03 March 2013, 22:20:55 UTC |
| 1067301 | Bob Carpenter | 03 March 2013, 22:00:13 UTC | removed assert in matrix | 03 March 2013, 22:00:13 UTC |
| 2e86f25 | Bob Carpenter | 03 March 2013, 21:59:57 UTC | more acknowledgments for doc patches | 03 March 2013, 21:59:57 UTC |
| b7e6d36 | Peter Li | 03 March 2013, 16:39:59 UTC | added chi square test for rng to binomial | 03 March 2013, 16:39:59 UTC |
| e76f585 | Peter Li | 03 March 2013, 15:51:49 UTC | added chi square test for rng to binomial | 03 March 2013, 15:51:49 UTC |
| 0c92450 | Peter Li | 03 March 2013, 15:47:32 UTC | added chi square test to rng for bernoulli | 03 March 2013, 15:47:32 UTC |
| 7b7bbb8 | Daniel Lee | 03 March 2013, 14:32:22 UTC | evaluated derivatives for poisson | 03 March 2013, 14:32:22 UTC |
| 280c5bc | Ben Goodrich | 03 March 2013, 04:39:27 UTC | Merge branch 'master' of https://github.com/stan-dev/stan | 03 March 2013, 04:39:27 UTC |
| 97f5c2e | Ben Goodrich | 03 March 2013, 04:39:14 UTC | forgot a couple things in 4d85a5435bf0a6f5604df3191bb540e754e091fe | 03 March 2013, 04:39:14 UTC |
| 658cbe5 | Peter Li | 03 March 2013, 01:52:05 UTC | added rng to scaled_inv_chi_square distribution with test | 03 March 2013, 01:52:05 UTC |
| b934de8 | Peter Li | 03 March 2013, 01:39:02 UTC | added rng test for student_t | 03 March 2013, 01:39:02 UTC |
| ea2589f | Peter Li | 03 March 2013, 01:28:54 UTC | modified rng test for univariate continuous except for scaled_inv_chi_square, logistic, and student_t | 03 March 2013, 01:28:54 UTC |
| f44b29b | maverickg | 02 March 2013, 21:23:40 UTC | rstan: add pairs to NAMESPACE | 02 March 2013, 21:23:40 UTC |
| 3046242 | maverickg | 02 March 2013, 21:23:07 UTC | rstan: update boost version | 02 March 2013, 21:23:07 UTC |
| aee4095 | maverickg | 02 March 2013, 20:40:02 UTC | Merge branch 'master' of https://github.com/stan-dev/stan | 02 March 2013, 20:40:02 UTC |
| 4d85a54 | Ben Goodrich | 02 March 2013, 19:25:37 UTC | introduce pairs.stanfit method and document it | 02 March 2013, 19:25:37 UTC |
| cf47db4 | maverickg | 02 March 2013, 17:41:09 UTC | Merge branch 'master' of https://github.com/stan-dev/stan | 02 March 2013, 17:41:09 UTC |
| b216c32 | maverickg | 02 March 2013, 17:41:05 UTC | rstan: test log_prob example | 02 March 2013, 17:41:05 UTC |
| da43b38 | Peter Li | 02 March 2013, 04:22:48 UTC | updated rng for univariate continuous distributions except trunc_normal | 02 March 2013, 04:22:48 UTC |
| 87ba0fa | Bob Carpenter | 02 March 2013, 01:54:12 UTC | upgrade to boost 1.53 from boost 1.52 | 02 March 2013, 01:54:12 UTC |
| f206423 | Daniel Lee | 02 March 2013, 01:49:44 UTC | evaluated derivatives for weibull | 02 March 2013, 01:49:44 UTC |
| d10a91b | Peter Li | 02 March 2013, 01:38:10 UTC | added chi square goodness of fit test to normal | 02 March 2013, 01:38:10 UTC |
| b19035a | Peter Li | 02 March 2013, 01:38:03 UTC | added chi square goodness of fit test to exponential | 02 March 2013, 01:38:03 UTC |
| cb54312 | Peter Li | 02 March 2013, 01:37:55 UTC | added chi square goodness of fit test to chi square | 02 March 2013, 01:37:55 UTC |
| eb1992e | Peter Li | 02 March 2013, 01:36:50 UTC | added rng to logistic with basic test | 02 March 2013, 01:36:50 UTC |
| 01de12c | Daniel Lee | 02 March 2013, 01:14:45 UTC | evaluated derivatives for uniform | 02 March 2013, 01:14:45 UTC |
| 94ecef4 | Daniel Lee | 01 March 2013, 23:34:49 UTC | evaluated derivatives for student_t | 01 March 2013, 23:34:49 UTC |
| 509b69e | Peter Li | 01 March 2013, 22:52:25 UTC | added rng to inv gamma with basic test | 01 March 2013, 22:52:25 UTC |
| a7a66c9 | Daniel Lee | 01 March 2013, 19:52:52 UTC | evaluated derivatives for student_t | 01 March 2013, 19:52:52 UTC |
