38a8d73 | Anders Goncalves da Silva | 16 October 2015, 23:53:39 UTC | Added functionality to allow calculating other distances from sequence data, and output plots without min/max points. Still need to update script documentation. | 16 October 2015, 23:53:39 UTC |
f725fbd | Anders Goncalves da Silva | 14 October 2015, 05:48:16 UTC | Commented out tests. | 14 October 2015, 05:48:16 UTC |
9eadbc0 | Anders Goncalves da Silva | 14 October 2015, 05:47:42 UTC | Added functionality to output raw long tables and output figures of a single group comparison. | 14 October 2015, 05:47:42 UTC |
ecc6d85 | Anders Goncalves da Silva | 10 September 2015, 00:24:57 UTC | Ignore CSV files | 10 September 2015, 00:24:57 UTC |
6102800 | Anders Goncalves da Silva | 10 September 2015, 00:23:55 UTC | Added functionality to calculate median and interquartile range, plus output separate plots for inter and intra comparisons. | 10 September 2015, 00:24:22 UTC |
cdaf417 | Anders Goncalves da Silva | 04 September 2015, 02:21:37 UTC | Updated information on how to run, and obtain the script. | 04 September 2015, 02:21:37 UTC |
eec7367 | Anders Goncalves da Silva | 04 September 2015, 02:09:04 UTC | Updated to include a test | 04 September 2015, 02:09:04 UTC |
50f449f | Anders Goncalves da Silva | 02 September 2015, 05:03:26 UTC | Added additional info to the README.md file | 02 September 2015, 05:03:26 UTC |
5541d20 | Anders Goncalves da Silva | 02 September 2015, 04:58:59 UTC | Added a README.md file for the MDU github | 02 September 2015, 04:58:59 UTC |
feef803 | Anders Goncalves da Silva | 28 August 2015, 05:47:50 UTC | Final 0.1 working version. | 28 August 2015, 05:47:50 UTC |
d971ac4 | Anders Goncalves da Silva | 28 August 2015, 05:47:34 UTC | Tutorial updated with the latest functions | 28 August 2015, 05:47:34 UTC |
7068679 | Anders Goncalves da Silva | 28 August 2015, 05:47:07 UTC | Update .gitignore to ignore the Ngono folder | 28 August 2015, 05:47:07 UTC |
1266003 | Anders Goncalves da Silva | 28 August 2015, 01:16:00 UTC | Adding exclusion file. Found bug with arguments parser. | 28 August 2015, 01:16:00 UTC |
914d603 | Anders Goncalves da Silva | 27 August 2015, 06:57:37 UTC | Small update to preamble. | 27 August 2015, 06:57:37 UTC |
c7f49df | Anders Goncalves da Silva | 27 August 2015, 06:56:21 UTC | Added additional test files to .gitignore | 27 August 2015, 06:56:21 UTC |
5b5436b | Anders Goncalves da Silva | 27 August 2015, 06:55:51 UTC | Seems to be a functioning script. | 27 August 2015, 06:55:51 UTC |
50edfb1 | Anders Goncalves da Silva | 27 August 2015, 06:24:41 UTC | Added a main function, and the facility to add a basename. I still need a categories file reader, with the ability to parse all categories. | 27 August 2015, 06:24:41 UTC |
985307a | Anders Goncalves da Silva | 27 August 2015, 02:07:26 UTC | Added an auxiliary function to output pretty tables. | 27 August 2015, 02:07:26 UTC |
0e46f41 | Anders Goncalves da Silva | 27 August 2015, 02:07:05 UTC | Updated .gitignore to ignore table example outputs | 27 August 2015, 02:07:05 UTC |
51096e0 | Anders Goncalves da Silva | 27 August 2015, 01:33:38 UTC | Added auxiliary function to produce a figure. | 27 August 2015, 01:33:38 UTC |
ad63c75 | Anders Goncalves da Silva | 27 August 2015, 01:33:20 UTC | Updated tutorial figure. | 27 August 2015, 01:33:20 UTC |
83e459c | Anders Goncalves da Silva | 27 August 2015, 01:33:06 UTC | Updated .gitignore to exclude test figure files. | 27 August 2015, 01:33:06 UTC |
27fd48e | Anders Goncalves da Silva | 27 August 2015, 01:18:02 UTC | Added auxiliary functions to read a FASTA file and calculate raw distance, and to read a CSV/TSV file, and output a matrix ready for analysis. | 27 August 2015, 01:18:02 UTC |
668eb55 | Anders Goncalves da Silva | 27 August 2015, 01:17:18 UTC | Updated .gitignore to include distances.tab | 27 August 2015, 01:17:18 UTC |
cf3b40e | Anders Goncalves da Silva | 27 August 2015, 00:37:33 UTC | Building the script by adding the main summary function. | 27 August 2015, 00:37:33 UTC |
8fa0f81 | Anders Goncalves da Silva | 27 August 2015, 00:07:41 UTC | First commit | 27 August 2015, 00:07:41 UTC |
39ead57 | Anders Goncalves da Silva | 26 August 2015, 23:52:56 UTC | Fixed some typos. | 26 August 2015, 23:52:56 UTC |
043271b | Anders Goncalves da Silva | 26 August 2015, 22:53:07 UTC | First commit. Things are working. | 26 August 2015, 22:53:07 UTC |