| f68b945 | Antoine Limasset | 04 April 2017, 11:42:06 UTC | Update README.md | 04 April 2017, 11:42:06 UTC |
| 0ace978 | Antoine Limasset | 04 April 2017, 11:41:15 UTC | Update README.md | 04 April 2017, 11:41:15 UTC |
| 590d873 | Malfoy | 21 June 2016, 13:01:01 UTC | forgot a debug | 21 June 2016, 13:01:01 UTC |
| d48f531 | Malfoy | 21 June 2016, 09:55:46 UTC | bug with correction mode | 21 June 2016, 09:55:46 UTC |
| b30d796 | Malfoy | 13 June 2016, 09:47:03 UTC | minor cleaning | 13 June 2016, 09:47:03 UTC |
| acd4876 | Malfoy | 13 June 2016, 09:43:07 UTC | add correction to the correction mode | 13 June 2016, 09:43:07 UTC |
| 6cd3ec4 | Malfoy | 10 June 2016, 15:03:39 UTC | bgreat dogMode work on perfect reads and perfect ref | 10 June 2016, 15:03:39 UTC |
| 6940368 | Malfoy | 07 June 2016, 14:17:44 UTC | dog mode work, ie don't segfault to test | 07 June 2016, 14:17:44 UTC |
| dd70c4e | Malfoy | 07 June 2016, 09:53:53 UTC | code here, debug is left | 07 June 2016, 09:53:53 UTC |
| 420f41e | Malfoy | 21 March 2016, 10:39:45 UTC | o command removed | 21 March 2016, 10:39:45 UTC |
| f762966 | Malfoy | 16 March 2016, 22:50:00 UTC | More mapping and faster | 16 March 2016, 22:50:00 UTC |
| caf925d | Malfoy | 11 March 2016, 13:29:13 UTC | memory optimization | 11 March 2016, 13:29:13 UTC |
| 97cd8ed | malfoy | 10 March 2016, 14:02:22 UTC | bug in small example | 10 March 2016, 14:02:22 UTC |
| 9a5fb71 | malfoy | 10 March 2016, 10:43:08 UTC | Debug end of mapping | 10 March 2016, 10:43:08 UTC |
| 48a3794 | malfoy | 08 March 2016, 13:56:49 UTC | deassalocation of memory | 08 March 2016, 13:56:49 UTC |
| 146ba99 | malfoy | 08 March 2016, 13:38:54 UTC | fix for segfault | 08 March 2016, 13:38:54 UTC |
| 1d25c85 | Malfoy | 08 March 2016, 08:58:29 UTC | Merge pull request #3 from stage-comprection/master Small changes to output and makefile | 08 March 2016, 08:58:29 UTC |
| e555904 | romain | 08 March 2016, 08:55:09 UTC | Changes to output Small correction on final output (cout) + added headers to output file in correction mode | 08 March 2016, 08:55:09 UTC |
| 247c1f2 | malfoy | 05 March 2016, 07:17:15 UTC | multithread lookup mphf | 05 March 2016, 07:17:15 UTC |
| 0a17db8 | malfoy | 04 March 2016, 15:57:53 UTC | MPHF in BGREAT | 04 March 2016, 15:57:53 UTC |
| 79080f7 | malfoy | 25 February 2016, 12:06:47 UTC | fwrite for faster IO | 25 February 2016, 12:06:47 UTC |
| c7389e3 | malfoy | 01 February 2016, 18:35:13 UTC | Merge branch 'master' of https://github.com/Malfoy/BGREAT | 01 February 2016, 18:35:13 UTC |
| 6bf0217 | malfoy | 01 February 2016, 18:34:28 UTC | not worth | 01 February 2016, 18:34:28 UTC |
| 7bf7667 | malfoy | 01 February 2016, 18:28:57 UTC | is speedup worth ? | 01 February 2016, 18:28:57 UTC |
| 83ba2e1 | Malfoy | 25 January 2016, 15:14:57 UTC | Update README.md | 25 January 2016, 15:14:57 UTC |
| 7c60623 | malfoy | 25 January 2016, 15:04:36 UTC | forgot a file | 25 January 2016, 15:04:36 UTC |
| cf4e162 | malfoy | 25 January 2016, 15:02:12 UTC | added coorection mode | 25 January 2016, 15:02:12 UTC |
| 159982d | malfoy | 25 January 2016, 14:00:19 UTC | fixed bug of terrible performance with 128bit and k<31 | 25 January 2016, 14:00:19 UTC |
| 1c6d9d1 | malfoy | 15 January 2016, 15:40:06 UTC | unitig file is now fasta | 15 January 2016, 15:40:06 UTC |
| 4d5abfd | Malfoy | 15 January 2016, 15:39:14 UTC | Update unitig.fa | 15 January 2016, 15:39:14 UTC |
| 88c46c9 | Malfoy | 15 January 2016, 15:36:36 UTC | Update and rename unitig.dot to unitig.fa | 15 January 2016, 15:36:36 UTC |
| f783233 | Malfoy | 15 January 2016, 15:35:28 UTC | Update README.md | 15 January 2016, 15:35:28 UTC |
| 7fad251 | malfoy | 15 January 2016, 15:09:33 UTC | allowed N in reads | 15 January 2016, 15:09:33 UTC |
| e5169f9 | malfoy | 08 January 2016, 13:57:53 UTC | bug when a read length was < k thanks helene | 08 January 2016, 13:57:53 UTC |
| 127c122 | malfoy | 07 January 2016, 14:54:35 UTC | add header in path file | 07 January 2016, 14:54:35 UTC |
| 3dd8018 | malfoy | 07 January 2016, 14:54:09 UTC | add header in path file | 07 January 2016, 14:54:09 UTC |
| b64b2fd | malfoy | 06 January 2016, 09:16:12 UTC | add unitig counter for impatient people | 06 January 2016, 09:16:12 UTC |
| 1c0737e | malfoy | 04 January 2016, 16:47:57 UTC | huge modification in the code organisation (to be improved) optimized memory access and resolved bug on rc transmission | 04 January 2016, 16:47:57 UTC |
| 0d33b4c | malfoy | 16 December 2015, 11:11:46 UTC | k-1 error | 16 December 2015, 11:11:46 UTC |
| ea310b9 | malfoy | 16 December 2015, 10:45:07 UTC | micro optimization getliestoverlap | 16 December 2015, 10:45:07 UTC |
| 522468b | malfoy | 07 December 2015, 10:36:37 UTC | better script | 07 December 2015, 10:36:37 UTC |
| 217426c | Malfoy | 25 November 2015, 15:48:41 UTC | corrected mutex file problem | 25 November 2015, 15:48:41 UTC |
| 9919160 | Malfoy | 20 November 2015, 15:42:39 UTC | Merge branch 'master' of https://github.com/Malfoy/BGREAT vlij Les lignes commençant par '#' seront ignorées, et un message vide | 20 November 2015, 15:42:39 UTC |
| c6159cd | Malfoy | 20 November 2015, 15:42:05 UTC | remove header from bruteforce | 20 November 2015, 15:42:05 UTC |
| e10f6f7 | Malfoy | 19 November 2015, 16:14:48 UTC | added pathexaustive | 19 November 2015, 16:14:48 UTC |
| e996583 | Malfoy | 19 November 2015, 14:24:41 UTC | huge bug in overlap detection ...corrected | 19 November 2015, 14:24:41 UTC |
| 45ef22a | Malfoy | 18 November 2015, 17:32:48 UTC | removed header | 18 November 2015, 17:32:48 UTC |
| 5b22b35 | Malfoy | 16 November 2015, 16:44:57 UTC | Path improvment | 16 November 2015, 16:44:57 UTC |
| 7cf4ba7 | Malfoy | 16 November 2015, 16:23:23 UTC | better main | 16 November 2015, 16:23:23 UTC |
| 8dc5ec6 | Malfoy | 13 November 2015, 15:05:22 UTC | better code for paths | 13 November 2015, 15:05:22 UTC |
| f502fd8 | Malfoy | 13 November 2015, 15:05:08 UTC | better code for paths | 13 November 2015, 15:05:08 UTC |
| 899bd46 | Malfoy | 13 November 2015, 14:33:20 UTC | Add code for paths | 13 November 2015, 14:33:20 UTC |
| 0e106a8 | kammiille | 12 October 2015, 09:22:07 UTC | added kmer type for 128 or 64 bit coding of overlap | 12 October 2015, 09:22:07 UTC |
| 84f8063 | Malfoy | 28 September 2015, 13:48:06 UTC | Update README.md | 28 September 2015, 13:48:06 UTC |
| 17ad78e | Malfoy | 18 September 2015, 14:44:24 UTC | bug with fastq | 18 September 2015, 14:44:24 UTC |
| a748582 | Malfoy | 18 September 2015, 13:41:49 UTC | added -q option for unsplited fastq files | 18 September 2015, 13:41:49 UTC |
| bfd915d | Malfoy | 15 September 2015, 14:50:14 UTC | Allowing the user to put multiple fasta file as input (User Request) | 15 September 2015, 14:50:14 UTC |
| e33448a | Antoine Limasset | 23 July 2015, 14:44:59 UTC | no option=instructions | 23 July 2015, 14:44:59 UTC |
| 723267b | Antoine Limasset | 17 July 2015, 13:02:09 UTC | Update README.md | 17 July 2015, 13:02:09 UTC |
| f17363a | Malfoy | 17 July 2015, 12:54:16 UTC | Added incomplete mapping and improved the parsing of option | 17 July 2015, 12:54:16 UTC |
| 58fee13 | Antoine Limasset | 30 June 2015, 08:59:38 UTC | Update README.md | 30 June 2015, 08:59:38 UTC |
| 315e5fb | Malfoy | 15 June 2015, 05:13:44 UTC | Renamed and updated python file, optimization of checkpair for allowing some indels | 15 June 2015, 05:13:44 UTC |
| f0a9c9e | malfoy | 13 June 2015, 12:05:09 UTC | add the number of nuc used in the last unitig for the alignment, updated README | 13 June 2015, 12:05:09 UTC |
| 9b4dfe2 | Malfoy | 12 June 2015, 06:54:14 UTC | removed cout | 12 June 2015, 06:54:14 UTC |
| 343fb08 | Malfoy | 11 June 2015, 15:05:39 UTC | added the headers in the output file noOverlap and notAligned and removed a redundancy in those files | 11 June 2015, 15:05:39 UTC |
| 829a7d4 | Antoine Limasset | 10 June 2015, 15:47:07 UTC | Update README.md | 10 June 2015, 15:47:07 UTC |
| 723d954 | Malfoy | 10 June 2015, 15:44:17 UTC | added option to rename the output files and imrpoved the display of the exhaustive mode | 10 June 2015, 15:44:17 UTC |
| 6d40680 | Malfoy | 10 June 2015, 15:39:39 UTC | added option to rename the output files and imrpoved the display of the exhaustive mode | 10 June 2015, 15:39:39 UTC |
| dd98cfc | Malfoy | 04 June 2015, 10:19:58 UTC | Cleaning, few improvments, add license | 04 June 2015, 10:19:58 UTC |
| 18db468 | Antoine Limasset | 20 May 2015, 07:18:30 UTC | Update README.md | 20 May 2015, 07:18:30 UTC |
| 1d0d532 | Antoine Limasset | 20 May 2015, 07:17:45 UTC | Update README.md | 20 May 2015, 07:17:45 UTC |
| 9ba104e | Malfoy | 20 May 2015, 07:12:39 UTC | correction for gcc | 20 May 2015, 07:12:39 UTC |
| 1f5527f | Malfoy | 19 May 2015, 15:01:26 UTC | debug for gcc | 19 May 2015, 15:01:26 UTC |
| c9e91dc | Antoine Limasset | 19 May 2015, 14:23:01 UTC | Update makefile | 19 May 2015, 14:23:01 UTC |
| 1191aca | Antoine Limasset | 19 May 2015, 14:22:22 UTC | Update bgreat.cpp | 19 May 2015, 14:22:22 UTC |
| 9cb4407 | Antoine Limasset | 19 May 2015, 14:21:55 UTC | Update aligner.cpp | 19 May 2015, 14:21:55 UTC |
| 9386fb8 | Antoine Limasset | 19 May 2015, 14:21:16 UTC | Update makefile | 19 May 2015, 14:21:16 UTC |
| 1a88062 | Antoine Limasset | 19 May 2015, 14:12:19 UTC | Update makefile | 19 May 2015, 14:12:19 UTC |
| 988e4b7 | Antoine Limasset | 19 May 2015, 14:08:02 UTC | Update README.md | 19 May 2015, 14:08:02 UTC |
| daec8fc | Antoine Limasset | 19 May 2015, 14:05:55 UTC | Update README.md | 19 May 2015, 14:05:55 UTC |
| bc018c6 | Malfoy | 19 May 2015, 13:54:58 UTC | add example | 19 May 2015, 13:54:58 UTC |
| 183fac4 | Malfoy | 19 May 2015, 13:51:27 UTC | improved readme and code removing | 19 May 2015, 13:51:27 UTC |
| 26aa7d6 | Antoine Limasset | 19 May 2015, 09:49:19 UTC | Update Map.py | 19 May 2015, 09:49:19 UTC |
| 2e8407c | Antoine Limasset | 19 May 2015, 09:46:29 UTC | Update README.md | 19 May 2015, 09:46:29 UTC |
| 9868870 | Antoine Limasset | 19 May 2015, 09:45:54 UTC | Update README.md | 19 May 2015, 09:45:54 UTC |
| c93a0c1 | Antoine Limasset | 19 May 2015, 09:42:53 UTC | Create README.md | 19 May 2015, 09:42:53 UTC |
| 78bd459 | Malfoy | 19 May 2015, 09:30:57 UTC | Python | 19 May 2015, 09:30:57 UTC |
| 0a57ec0 | Malfoy | 19 May 2015, 09:29:17 UTC | cleaning github | 19 May 2015, 09:29:17 UTC |
