| 172a03c | Latrille | 22 March 2022, 13:42:16 UTC | Update README.md | 22 March 2022, 13:42:16 UTC |
| 71d7d93 | ThibaultLatrille | 24 May 2017, 15:52:13 UTC | The self-consistent equation is not monontonous | 24 May 2017, 15:52:13 UTC |
| 99af069 | ThibaultLatrille | 24 May 2017, 15:16:33 UTC | Title for figure 9 and S1 were switched | 24 May 2017, 15:16:33 UTC |
| bf44cc9 | ThibaultLatrille | 24 May 2017, 15:11:55 UTC | Changed 'small gap' to 'weak erosion' in figures | 24 May 2017, 15:11:55 UTC |
| b1f62bd | ThibaultLatrille | 24 May 2017, 14:32:45 UTC | Fixed typos in manuscript | 24 May 2017, 14:32:45 UTC |
| e0a8ba5 | ThibaultLatrille | 24 May 2017, 13:47:35 UTC | Mispelled 'population size' | 24 May 2017, 13:47:35 UTC |
| 4a08382 | ThibaultLatrille | 24 May 2017, 13:45:20 UTC | Added presentation folder which contains all artworks and presentation | 24 May 2017, 13:45:20 UTC |
| 3b3244f | ThibaultLatrille | 24 May 2017, 13:33:40 UTC | Removed mathematica notebook | 24 May 2017, 13:33:40 UTC |
| 9e16ea6 | ThibaultLatrille | 24 May 2017, 13:32:44 UTC | Removed the figures.tex files that is now splited into fig1a.tex, fig1b.tex and fig6.tex in Figures folder | 24 May 2017, 13:32:44 UTC |
| 520200d | ThibaultLatrille | 24 May 2017, 13:31:24 UTC | Removed mathematica notebooks | 24 May 2017, 13:31:24 UTC |
| 12275e5 | ThibaultLatrille | 24 May 2017, 13:27:11 UTC | Removed the .png and .svg figures unecessary | 24 May 2017, 13:27:11 UTC |
| f9d906e | ThibaultLatrille | 24 May 2017, 13:24:12 UTC | Added /Figures folder containing all the figures of the manuscript, and updated the .tex | 24 May 2017, 13:24:12 UTC |
| 6ef1354 | Nicolas Lartillot | 23 May 2017, 08:24:56 UTC | merge-conflict resolved | 23 May 2017, 08:24:56 UTC |
| 5190178 | Nicolas Lartillot | 23 May 2017, 08:19:58 UTC | last version before 1st submission | 23 May 2017, 08:19:58 UTC |
| b05a6d5 | ThibaultLatrille | 11 May 2017, 12:32:48 UTC | Default options of redQueen.py in the README | 11 May 2017, 12:32:48 UTC |
| 421c62a | ThibaultLatrille | 13 April 2017, 09:18:52 UTC | Removed old presentation | 13 April 2017, 09:18:52 UTC |
| 350e38d | Thibault Latrille | 13 April 2017, 09:10:05 UTC | ANR Dasire presentation in Montpellier | 13 April 2017, 09:10:05 UTC |
| 8d54b51 | Thibault Latrille | 06 March 2017, 10:07:32 UTC | Removed unused print | 06 March 2017, 10:07:32 UTC |
| c3e397c | Thibault Latrille | 06 March 2017, 10:06:01 UTC | Print % of simulations computed at the end of computation (stopped due to wall-time) | 06 March 2017, 10:06:01 UTC |
| 3be546c | Thibault Latrille | 03 March 2017, 16:14:17 UTC | Minor fixes (cf email) and added figures.tex | 03 March 2017, 16:14:17 UTC |
| 4410dc2 | Nicolas Lartillot | 02 March 2017, 14:34:37 UTC | Merge branch 'master' of https://github.com/ThibaultLatrille/RedQueen | 02 March 2017, 14:34:37 UTC |
| 3df2cd0 | Nicolas Lartillot | 02 March 2017, 14:33:03 UTC | last version of manuscript | 02 March 2017, 14:33:03 UTC |
| f043272 | Thibault Latrille | 02 March 2017, 10:23:49 UTC | Changed "v*r_0" to "vg" in figures | 02 March 2017, 10:23:49 UTC |
| b2271ba | Thibault Latrille | 02 March 2017, 10:00:23 UTC | Merge branch 'master' of github.com:ThibaultLatrille/RedQueen | 02 March 2017, 10:00:23 UTC |
| 069f46d | Thibault Latrille | 02 March 2017, 10:00:02 UTC | Changed r_0 to g in figures | 02 March 2017, 10:00:02 UTC |
| 6416643 | Nicolas Lartillot | 28 February 2017, 21:21:45 UTC | Merge branch 'master' of https://github.com/ThibaultLatrille/RedQueen | 28 February 2017, 21:21:45 UTC |
| af8881f | Nicolas Lartillot | 28 February 2017, 21:20:33 UTC | version march 31 | 28 February 2017, 21:20:33 UTC |
| 0dfb9c7 | Thibault Latrille | 28 February 2017, 19:44:36 UTC | Deleted unused figures and added the new relevant versions | 28 February 2017, 19:44:36 UTC |
| 3cfc793 | Thibault Latrille | 28 February 2017, 19:43:05 UTC | Better display for figures | 28 February 2017, 19:43:05 UTC |
| 1d80034 | Thibault Latrille | 28 February 2017, 13:55:53 UTC | generate table in .tex format | 28 February 2017, 13:55:53 UTC |
| 6379b1c | Thibault Latrille | 27 February 2017, 17:08:14 UTC | Different name for different wall time | 27 February 2017, 17:08:14 UTC |
| aa406eb | Thibault Latrille | 27 February 2017, 16:50:13 UTC | Can restart a computation if not finished | 27 February 2017, 16:50:13 UTC |
| 2ca5f34 | Thibault Latrille | 27 February 2017, 16:07:21 UTC | Added wall time | 27 February 2017, 16:07:21 UTC |
| 3ae573f | Thibault Latrille | 27 February 2017, 08:32:06 UTC | Ignore /data folder | 27 February 2017, 08:32:06 UTC |
| 82e11a0 | Thibault Latrille | 24 February 2017, 17:31:23 UTC | Merge conflict | 24 February 2017, 17:31:23 UTC |
| e885e0f | Thibault Latrille | 24 February 2017, 17:17:18 UTC | Friday night code | 24 February 2017, 17:17:18 UTC |
| 53b7b8e | Nicolas Lartillot | 24 February 2017, 17:00:18 UTC | friday nightgit status | 24 February 2017, 17:00:18 UTC |
| 53f5469 | Nicolas Lartillot | 24 February 2017, 13:40:04 UTC | Merge branch 'master' of https://github.com/ThibaultLatrille/RedQueen | 24 February 2017, 13:40:04 UTC |
| 62d94e9 | Nicolas Lartillot | 24 February 2017, 13:39:52 UTC | new text version | 24 February 2017, 13:39:52 UTC |
| 97faff2 | Thibault Latrille | 24 February 2017, 11:22:44 UTC | Added figures (poisson and power law fitness) | 24 February 2017, 11:22:44 UTC |
| af8c749 | Thibault Latrille | 24 February 2017, 11:21:00 UTC | Ignore file .p (python pickle) | 24 February 2017, 11:21:00 UTC |
| 90f1309 | Thibault Latrille | 24 February 2017, 11:17:45 UTC | Save figures in batches, changed back diversity estimation (not taking into account mutation) | 24 February 2017, 11:17:45 UTC |
| cda06a9 | Thibault Latrille | 23 February 2017, 17:21:57 UTC | command 'redqueen.py' accepts parameters inline | 23 February 2017, 17:21:57 UTC |
| f0f0698 | Thibault Latrille | 23 February 2017, 15:57:20 UTC | Use 'Agg' as backend for matplotlib | 23 February 2017, 15:57:20 UTC |
| 06a47ca | Nicolas Lartillot | 23 February 2017, 09:55:37 UTC | Merge branch 'master' of https://github.com/ThibaultLatrille/RedQueen | 23 February 2017, 09:55:37 UTC |
| 9f28602 | Nicolas Lartillot | 23 February 2017, 09:55:33 UTC | last version of manuscript.. | 23 February 2017, 09:55:33 UTC |
| 45d1abf | Thibault Latrille | 23 February 2017, 08:44:49 UTC | Better visualisation of graphs | 23 February 2017, 08:44:49 UTC |
| 5690e4a | Thibault Latrille | 22 February 2017, 10:18:08 UTC | Fixed small load and refactored plot of series | 22 February 2017, 10:18:08 UTC |
| dbf1312 | Thibault Latrille | 21 February 2017, 14:49:06 UTC | Print more relevant in console, also fixed small load developement | 21 February 2017, 14:49:06 UTC |
| f4d5ccf | Thibault Latrille | 20 February 2017, 17:38:12 UTC | Fixed issue for 'float division by 0' | 20 February 2017, 17:38:12 UTC |
| c7d0c7b | Nicolas Lartillot | 19 February 2017, 12:51:30 UTC | Merge branch 'master' of https://github.com/ThibaultLatrille/RedQueen | 19 February 2017, 12:51:30 UTC |
| d90adf8 | Nicolas Lartillot | 19 February 2017, 12:51:26 UTC | working on article | 19 February 2017, 12:51:26 UTC |
| 296d651 | Thibault Latrille | 16 February 2017, 16:57:29 UTC | RedQueen.py is compatible for both python 2 and 3, removed redQueen3.py | 16 February 2017, 16:57:29 UTC |
| c4f6904 | Thibault Latrille | 16 February 2017, 16:55:33 UTC | Added variation of recombinaison rate across hotspots and poisson fitness function | 16 February 2017, 16:55:33 UTC |
| 5328ec7 | Thibault Latrille | 16 February 2017, 14:31:00 UTC | General estimation of summary statistic (mean-field not linearized) | 16 February 2017, 14:31:00 UTC |
| 9cb1712 | Thibault Latrille | 15 February 2017, 14:44:45 UTC | Merged fixes from redQueen.py2 to RedQueen.py3 | 15 February 2017, 14:44:45 UTC |
| 972771d | Nicolas Lartillot | 15 February 2017, 12:20:30 UTC | minor corrections to tex manuscript | 15 February 2017, 12:20:30 UTC |
| 05cdf69 | Nicolas Lartillot | 15 February 2017, 12:20:16 UTC | minor changes to figure legends and captions | 15 February 2017, 12:20:16 UTC |
| c6df2dc | Nicolas Lartillot | 15 February 2017, 10:36:33 UTC | Merge branch 'master' of https://github.com/ThibaultLatrille/RedQueen | 15 February 2017, 10:36:33 UTC |
| 543d7ac | Nicolas Lartillot | 15 February 2017, 10:36:28 UTC | last version of manuscript | 15 February 2017, 10:36:28 UTC |
| cf69116 | Thibault Latrille | 14 February 2017, 16:44:16 UTC | Plot selective strength as a summary statistic | 14 February 2017, 16:44:16 UTC |
| cc8e836 | Thibault Latrille | 14 February 2017, 14:38:26 UTC | Porting to python 3 completed | 14 February 2017, 14:38:26 UTC |
| 6568a0a | Thibault Latrille | 14 February 2017, 13:30:04 UTC | Porting python code from version 2 to 3 | 14 February 2017, 13:30:04 UTC |
| 384f1f8 | Thibault Latrille | 14 February 2017, 13:23:43 UTC | Fixed some typos in the manuscript | 14 February 2017, 13:23:43 UTC |
| 42f9209 | Thibault Latrille | 14 February 2017, 13:22:28 UTC | Commented all functions and classes | 14 February 2017, 13:22:28 UTC |
| 1797b8c | Nicolas Lartillot | 29 July 2016, 13:35:41 UTC | Merge branch 'master' of https://github.com/ThibaultLatrille/RedQueen | 29 July 2016, 13:35:41 UTC |
| e99c144 | Nicolas Lartillot | 29 July 2016, 13:35:36 UTC | minor modifs to manuscript | 29 July 2016, 13:35:36 UTC |
| 6e71845 | Thibault Latrille | 26 July 2016, 13:02:12 UTC | Use of new conventions for \epsilon = \sqrt( v r0 / \alpha u) and \mu = 4 N_e in python script | 26 July 2016, 13:02:12 UTC |
| 4379480 | Thibault Latrille | 26 July 2016, 11:40:45 UTC | Save also figures for self-consistent equation and for phase plan trajectory (x versus \theta) | 26 July 2016, 11:40:45 UTC |
| 34d1a1c | Thibault Latrille | 26 July 2016, 11:39:51 UTC | Fix typos in equations | 26 July 2016, 11:39:51 UTC |
| 274d44f | Thibault Latrille | 26 July 2016, 10:51:04 UTC | Use of new definition of \epsilon = \sqrt( v r0 / \alpha u) and \mu = 4 N_e u | 26 July 2016, 10:51:04 UTC |
| bf0dba3 | Nicolas Lartillot | 18 July 2016, 13:02:34 UTC | new version of the article: redqueen.tex ; python script modified to draw both approximations (mean field and small load) on same graph, together with simulation summaries | 18 July 2016, 13:02:34 UTC |
| dbae3b8 | Thibault Latrille | 08 July 2016, 06:34:09 UTC | Add Indesign presentation and exported pdf of the presentation | 08 July 2016, 06:34:09 UTC |
| 2f4ee9e | Latrille | 08 July 2016, 06:30:59 UTC | Update README.md | 08 July 2016, 06:30:59 UTC |
| 8ed5d58 | Thibault Latrille | 08 July 2016, 06:19:32 UTC | Merge branch 'master' of github.com:ThibaultLatrille/RedQueen | 08 July 2016, 06:19:32 UTC |
| bcda5ff | Thibault Latrille | 08 July 2016, 06:19:21 UTC | Update the tex presentation | 08 July 2016, 06:19:21 UTC |
| 7cbad75 | Thibault Latrille | 08 July 2016, 06:18:57 UTC | Manuscript is convention and parameters are now synced with the python script | 08 July 2016, 06:18:57 UTC |
| 39e793a | Thibault Latrille | 08 July 2016, 06:18:03 UTC | Remove old files not necessary (bib, tex and txt) | 08 July 2016, 06:18:03 UTC |
| 0632ceb | Thibault Latrille | 08 July 2016, 06:16:45 UTC | Python script is clean and ready for release | 08 July 2016, 06:16:45 UTC |
| 077cfbc | Thibault Latrille | 08 July 2016, 06:16:08 UTC | Cleaning of the mathematica notebooks | 08 July 2016, 06:16:08 UTC |
| ff05308 | Thibault Latrille | 08 July 2016, 06:15:14 UTC | Add the figures in .pdf format | 08 July 2016, 06:15:14 UTC |
| 70456a8 | Thibault Latrille | 08 July 2016, 06:14:55 UTC | Gitignore don't ignore pdf in the subfolders (such as Images or Figures) | 08 July 2016, 06:14:55 UTC |
| 944d0cb | Thibault Latrille | 08 July 2016, 06:11:54 UTC | Removed all png images (not necessary), and update illustrator file | 08 July 2016, 06:11:54 UTC |
| 32c1ede | Nicolas Lartillot | 07 July 2016, 12:47:17 UTC | pas coucou | 07 July 2016, 12:47:17 UTC |
| e6be04f | Nicolas Lartillot | 07 July 2016, 12:46:42 UTC | coucou | 07 July 2016, 12:46:42 UTC |
| e55639e | Thibault Latrille | 06 July 2016, 15:44:50 UTC | Refactor of the Classes and renaming of methods and attributes to fit with the manuscript | 06 July 2016, 15:44:50 UTC |
| 12bb32e | Thibault Latrille | 05 July 2016, 15:21:26 UTC | Removed colors from simulations | 05 July 2016, 15:21:26 UTC |
| 0ffb86d | Thibault Latrille | 05 July 2016, 14:31:37 UTC | Remove save_figure from simulation, not necessary anymore | 05 July 2016, 14:31:37 UTC |
| 9ac377a | Thibault Latrille | 05 July 2016, 14:17:17 UTC | Remove save_figure from batches, not necessary anymore | 05 July 2016, 14:17:17 UTC |
| 7507f1c | Thibault Latrille | 05 July 2016, 14:11:02 UTC | removed Phase diagram | 05 July 2016, 14:11:02 UTC |
| 4a1eba5 | Thibault Latrille | 26 June 2016, 11:23:05 UTC | All the equations are in the manuscript | 26 June 2016, 11:23:05 UTC |
| c99a98e | Thibault Latrille | 26 June 2016, 11:21:46 UTC | Illustrator A0 Poster for JOBIM | 26 June 2016, 11:21:46 UTC |
| d67fb90 | Thibault Latrille | 15 June 2016, 16:30:33 UTC | Compute series approximation of measures (K_e, V and \tau) for simulations | 15 June 2016, 16:30:33 UTC |
| a86a743 | Thibault Latrille | 15 June 2016, 16:29:13 UTC | Provide series approximation of measures (K_e, V and \tau), annotate and split the notebooks | 15 June 2016, 16:29:13 UTC |
| ed198ac | Thibault Latrille | 13 June 2016, 13:20:13 UTC | Included functions to draw the landscape of hotspots (\sum l_i x_i^2) and get rid of functions never used | 13 June 2016, 13:20:13 UTC |
| 01f76ea | Thibault Latrille | 13 June 2016, 13:16:58 UTC | Bibtex file added, but it is a copy from last internship not yet the correct references | 13 June 2016, 13:16:58 UTC |
| 5fce40e | Thibault Latrille | 13 June 2016, 13:13:32 UTC | The slide on estimated mean activity was not clear | 13 June 2016, 13:13:32 UTC |
| 6eaaa96 | Thibault Latrille | 13 June 2016, 13:12:03 UTC | Illustator files in accordance with the new presentation | 13 June 2016, 13:12:03 UTC |
| 9f100cf | Thibault Latrille | 13 June 2016, 13:03:05 UTC | Bibtex temp files aren't necessary | 13 June 2016, 13:03:05 UTC |
| 26499b3 | Thibault Latrille | 01 June 2016, 14:04:01 UTC | Created file red-queen.tex and remove equation.tex | 01 June 2016, 14:04:01 UTC |
