| f59f05d | Andrew Sundstrom | 13 March 2017, 21:53:28 UTC | Updated README. | 13 March 2017, 21:53:28 UTC |
| 75ddb12 | Andrew Sundstrom | 07 October 2016, 05:40:03 UTC | Fixed typo in output. | 07 October 2016, 05:40:03 UTC |
| 5404878 | Andrew Sundstrom | 07 October 2016, 05:12:41 UTC | Changed the path in the analysis programs to use the simulation data I just added into this repo. | 07 October 2016, 05:12:41 UTC |
| 4536a15 | Andrew Sundstrom | 07 October 2016, 05:09:30 UTC | Added data from my 10 test simulations for each of the 4 scenarios in the paper. | 07 October 2016, 05:09:30 UTC |
| de699a0 | Andrew Sundstrom | 07 October 2016, 04:24:46 UTC | Added result and summary statistics output to two of the analysis programs; tweaks. | 07 October 2016, 04:24:46 UTC |
| 7e1206c | Andrew Sundstrom | 07 October 2016, 02:46:08 UTC | Added programs to analyze the results of test simulations. | 07 October 2016, 02:46:08 UTC |
| 6076fd3 | Andrew Sundstrom | 06 October 2016, 13:47:27 UTC | To speed up simulation run time, I set the simulation parameters to not generate 3D plots in the console and not output local fitness in 2D or 3D; I added output of population and occupation arrays to perform population and spatial-structural analysis for quantitatively assessing similarity of simulation evolutions and final outcomes. | 06 October 2016, 13:47:27 UTC |
| f80946c | Andrew Sundstrom | 03 October 2016, 21:24:13 UTC | Fixed filecopy bug, a residue from the prior implementation. | 03 October 2016, 21:24:13 UTC |
| af0e73f | Andrew Sundstrom | 21 April 2016, 16:27:05 UTC | Cosmetic changes to initialize_occupation_pattern.m files. | 21 April 2016, 16:27:05 UTC |
| f7161dd | Andrew Sundstrom | 21 April 2016, 15:42:47 UTC | Corrected misspellings in initialize_operating_parameters.m files. | 21 April 2016, 15:42:47 UTC |
| 2e9d804 | Andrew Sundstrom | 20 April 2016, 03:44:24 UTC | Numbered the bullets in README. | 20 April 2016, 03:44:24 UTC |
| 5a47473 | Andrew Sundstrom | 19 April 2016, 22:07:10 UTC | Updated README. | 19 April 2016, 22:07:10 UTC |
| 354670b | Andrew Sundstrom | 19 April 2016, 20:37:26 UTC | Removed the four simulate_* legacy files. | 19 April 2016, 20:37:26 UTC |
| 29ad063 | Andrew Sundstrom | 19 April 2016, 20:21:56 UTC | Cosmetic changes to util/* files. | 19 April 2016, 20:21:56 UTC |
| ac64dc3 | Andrew Sundstrom | 18 April 2016, 20:07:58 UTC | Removed unnecessary functional framework from remaining initialize_occupation_pattern.m files. | 18 April 2016, 20:07:58 UTC |
| 86d9453 | Andrew Sundstrom | 15 April 2016, 22:51:13 UTC | Added global declarations to the remaining operating parameter files (for the remaining simulations), and renamed them from load_* to initialize_*. | 15 April 2016, 22:51:13 UTC |
| 8ff3495 | Andrew Sundstrom | 15 April 2016, 22:38:48 UTC | Fixed display bug (tick was not globally declared); improved simulator driver logic (added a failsafe post-simulation path reset that will execute upon clean exit, any error, or a ctrl-C interrupt); renamed metabolic_symbiosis_2d/load_operating_parameters.m to metabolic_symbiosis_2d/initialize_operating_parameters.m. | 15 April 2016, 22:38:48 UTC |
| c103df8 | Andrew Sundstrom | 13 April 2016, 20:13:36 UTC | external/freezeColors.m: Modified three instances of nargchk (which is being deprecated) to use narginchk. | 13 April 2016, 20:13:36 UTC |
| 790a151 | Andrew Sundstrom | 12 April 2016, 22:20:46 UTC | Scrapped package namespaces (wrong approach); using addpath wrapper around simulator instead; debugging metabolic_symbiosis_2d simulation: plot_statistics produces empty line graphs. | 12 April 2016, 22:20:46 UTC |
| af1060a | Andrew Sundstrom | 08 April 2016, 22:04:10 UTC | Beginning first attempt to make the simulation code more modular, by using package namespaces. | 08 April 2016, 22:04:10 UTC |
| 9bc6c87 | Andrew Sundstrom | 26 February 2016, 21:45:44 UTC | Fixed a filename bug in the four core functions; added all function dependencies to the core path for convenience. | 26 February 2016, 21:45:44 UTC |
| 409c3cc | Andrew Sundstrom | 14 July 2015, 22:11:32 UTC | Added simulation code. | 14 July 2015, 22:11:32 UTC |
| 1320664 | Andrew Sundstrom | 05 January 2015, 20:23:57 UTC | Initial commit | 05 January 2015, 20:23:57 UTC |
