https://github.com/davidliwei/RNASeqReadSimulator

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Revision Author Date Message Commit Date
120d861 Merge pull request #2 from yfu/patch-1 Using a list instead of an iterator in seqref.keys(), proposed by yfu 16 October 2014, 15:12:05 UTC
5872f83 Merge pull request #1 from roryk/master Update getSegs.py to roryk's modification about the empty status of startrange. 16 October 2014, 15:03:35 UTC
457747d Using a list instead of an iterator Convert the iterator seqref.keys() into a list and put that into refkeys. Otherwise, "if not bedfield[0] in refkeys:" will always complain the chromosome is not in refkeys. This is probably due to recent changes in Biopython. 08 September 2014, 05:25:45 UTC
2505726 Update getSegs.py 10 February 2014, 18:39:30 UTC
4ce1b70 Fix a bug of not generating sequencing errors; update demo examples. 01 February 2013, 18:42:23 UTC
d2bf1dd Fix a bug in handling empty BED lines 09 May 2012, 19:13:24 UTC
9eed18a Fix a bug in in dealing with empty BED lines. 09 May 2012, 19:11:54 UTC
5d34664 allow strand-specific reads; fix a demo bug 04 May 2012, 00:43:58 UTC
5f97584 Fix a few bugs in the demo 26 March 2012, 01:40:28 UTC
74447bf xxx 16 February 2012, 22:46:32 UTC
b6ba2f1 fffk 16 February 2012, 22:42:02 UTC
1d15604 fkk 16 February 2012, 22:39:03 UTC
2d83e30 rm 16 February 2012, 22:07:46 UTC
edd0616 Major updates 16 February 2012, 22:05:32 UTC
02ff798 Remove python3 requirement; re-arrange the data structure. 16 February 2012, 21:55:26 UTC
c0f7cbf ModifiedREADME 09 February 2012, 00:34:13 UTC
34e1e52 Update 1 09 February 2012, 00:06:34 UTC
933fcb3 first commit 08 February 2012, 23:17:42 UTC
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