https://github.com/geodynamics/citcoms

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Revision Author Date Message Commit Date
7350e59 Disable pid output for processors of rank>0 02 February 2007, 20:10:45 UTC
fdbac82 Removed spaces around the equal sign when writing pid file, which confused parser.py 31 January 2007, 20:46:02 UTC
c009c18 Moved Python egg stuff into our Autoconf macro library. 30 January 2007, 21:16:23 UTC
ec54f98 added spaces after = in sec b.2; redid table in c.4.9 prev updated by eh; regen pdf 30 January 2007, 19:29:30 UTC
1f34cc0 Compute the 2nd invariant of strain rate tensor in spherical coordinate 30 January 2007, 19:04:35 UTC
c27c716 The functionality of this routine is now expanded so that for evey time step the element materials are read in. The code for determining the material file names and opening the file name and then reading in the element files is placed in the same code that the age grids and velocity files are processed. Obviously, reading in materials currently only works for Full; fill be working on Regional next. 29 January 2007, 20:51:24 UTC
a60c042 Changed the seequence placement in the time step when the age grids are assimilated into the temperature field. Previously, going back to the original code contributed by CC, the assimilation occurred avery time the temperature BCs were set (meaning multiple times in a PC loop). Now assimilation happens only once at the end of the time step. This is placed at the end of the routine PG_time_step_solve. Once we have worked with this some more, we will want to expose this code at a higher level so that assimulation will work properly from either plain C code or the Pyre version. Currently only tested with Full. 29 January 2007, 20:46:28 UTC
d9e66bf A minor change so that restart now works properly when lith_age=1. Now restart from old temperature fields appear to work without any obvious corruption of the Temp field. Only tested with Full. 29 January 2007, 20:37:00 UTC
55cca22 Small change for rheol=5 to use harmonic mean when element materials are read in. Also, this involved a minor conflict resolution with Eh s recent change to this file 29 January 2007, 20:32:27 UTC
fe3fb9f Write controller inventory to pid file. This is a heck! 26 January 2007, 21:32:04 UTC
38bdaf9 Compute the velocity in Cartesian coord on the fly. The previous code computed and stored the Cartesian velocity in E->temp in v_from_vector() and accessed E->temp in velo_from_element. This is bug prone. E->temp is a temporary array and should be used for storage. Also, in previous code, if E->sphere.cap[m].V is modified, one has to recompute E->temp. Otherwise, the Cartesian velocity will be incorrect. 25 January 2007, 23:30:49 UTC
8734680 Get rid of static variables 25 January 2007, 01:38:10 UTC
3cf8bd1 Refactoring various functions to simplify their pyre counterpart 25 January 2007, 00:57:21 UTC
f727da9 Fixed a bug in locating elements right above tracers 17 January 2007, 20:02:37 UTC
495961c Replaced 'exit(0)' with correct MPI exit, related to issue69 17 January 2007, 01:54:39 UTC
ccfc46d Fixed issue77 - velocity b.c not scaled correctly when age becomes negative 16 January 2007, 20:37:14 UTC
2ca42ed Read input parameter 'half_space_age' when tic_method=1 16 January 2007, 19:49:51 UTC
efe5b97 Fixed incorrect prototype 16 January 2007, 18:50:16 UTC
cada3c8 When "tic_method=1", the temperature is isothermal (== bottom b.c.) with a uniformly cold plate (thickness specified by 'half_space_age') 16 January 2007, 18:43:28 UTC
02def5d Tracer-defined rheology -- low viscosity channel/wedge 16 January 2007, 17:41:55 UTC
3aef1cf Added regional (passive) tracers 15 January 2007, 21:42:04 UTC
e7950e5 Fix for time-invariant velocity boundary conditions, issue75 09 January 2007, 21:11:58 UTC
1be8307 Another document fix for issue75, related to "how to specify time-invariant velocity boundary conditions?" 08 January 2007, 23:09:47 UTC
0bfa938 1. Fixed a reference error, "Section 1.6" should be "Equation 1.6" 2. Velocity BC input and geoid output are dimensional. The units were undocumented in previous release. This fix the issue75. 3. More information about geoid output: the meaning of each column and how to compute the geoid field. 08 January 2007, 22:19:35 UTC
8fb120b Truncate the temperature grd file at specified min/max Sometimes the temperature field has overshoot/undershoot, which would be leave a blank area in the contour plot. This is a simple workaround. 08 January 2007, 22:19:14 UTC
bf5e730 Fix for issue73 "problems with autocombine.py in single workstation mode" $HOSTNAME is not defined in the non-interactive shell in Ubuntu 6.10. Need to put a quote around it. 05 January 2007, 22:33:03 UTC
7d3ef92 Fix for issue72: "'make install' broken for non-pyred CitcomS". 05 January 2007, 00:06:11 UTC
9b67fc5 added note about updating to 2.10.3 20 December 2006, 22:13:44 UTC
0b9c4d2 Regenerated ChangeLog upto r5565 09 December 2006, 00:26:38 UTC
545c4df gurnis final changes; image resize; ready for release 09 December 2006, 00:22:28 UTC
47bdc2d small text changes; image resize 08 December 2006, 23:50:10 UTC
7da60aa Added "created by OpenDX" on several figure captions 08 December 2006, 23:45:26 UTC
03df21a Updated MayaVi2 section 08 December 2006, 23:36:57 UTC
8f5c823 Renamed the MayaVi launching script and move it to visual/ 08 December 2006, 23:30:39 UTC
dd70690 Added executable bit to file permission 08 December 2006, 23:26:02 UTC
742ed51 Add plugins for MayaVi2 to installation 08 December 2006, 22:44:00 UTC
92235c0 Added README files 08 December 2006, 22:27:26 UTC
c60971f fixed image size, text size and other small text changes 08 December 2006, 22:00:21 UTC
8c92de8 Removing reduce filter from comments, as it is currently obsolete. 08 December 2006, 21:16:47 UTC
4511a3d Added MayaVi screenshot to manual, along with a couple of other fixes. 08 December 2006, 21:15:17 UTC
13061f6 Last set of patches to citcoms_plugins * Display filename in mayavi pipeline * Changed glob pattern so that only HDF5 timestep files can be selected 08 December 2006, 20:03:11 UTC
af17846 Forgot to rename data filters. 08 December 2006, 19:47:43 UTC
de6f70d Added MayaVi2 screenshot for the manual. 08 December 2006, 17:53:20 UTC
75bb12b Various patches. 08 December 2006, 17:44:47 UTC
b3423fa Forking original plugins 08 December 2006, 17:40:08 UTC
9c83a26 Archiving original plugins. 08 December 2006, 17:32:25 UTC
42b3b3e Modify plugins directory 08 December 2006, 17:31:25 UTC
3c488f3 Explain contents of each directory. 08 December 2006, 17:29:46 UTC
849cea5 Made 'install_deps' actually do what 'configure' says it's doing (*missing* deps, not *all*). 08 December 2006, 02:29:09 UTC
8465d3f reinstated a few lost changes; changed caption position on fig 5.3 on request; enlarged fig 5.4; regen pdf 07 December 2006, 23:26:14 UTC
79a8733 chapter 5 * Added MayaVi2 in the introduction * Added links to MayaVi2 installation 07 December 2006, 22:34:26 UTC
6e256a7 fixed image size; regen pdf 07 December 2006, 22:19:37 UTC
e7c2ea3 text fixes to recent additions 07 December 2006, 22:09:17 UTC
b7662aa * Put back the HDFView sections * Added a screenshot of HDFView * Added a warning on "-O3" compiler flag 07 December 2006, 21:30:53 UTC
7bf8a4b text edits to appendices and bib 07 December 2006, 05:03:23 UTC
cf68821 small changes to chapt 6; standardized cross refference style; sstandardized code spacing 07 December 2006, 00:12:17 UTC
8910ace enumerating several sections of the instructions in chap 5 for clarity, and a few minor text fixes 06 December 2006, 23:31:57 UTC
cd4ffb9 a few text fixes in chapter 3 06 December 2006, 20:59:49 UTC
bb3c41c a few text fixes, preface to end of chapt 2 06 December 2006, 20:33:12 UTC
6f35a8c gurnis corrections and some other fixes 06 December 2006, 18:59:56 UTC
8cee12e Temporarily removing Mayavi2 files from Makefile.am 06 December 2006, 08:52:50 UTC
3c51bb9 Archive files created during Martin Weier's internship 06 December 2006, 08:23:54 UTC
bb9bfc7 Reorganized structure of the Mayavi2 plugin modules 06 December 2006, 08:16:37 UTC
0dce83c Simplified the file that will be be copied to user's ~/.mayavi2 directory. 06 December 2006, 08:13:00 UTC
845881d Group all CitcomS options under a single menu group. 06 December 2006, 06:55:03 UTC
d7337ee Quick fixes to manual. 06 December 2006, 05:58:52 UTC
1797b61 Adding missing files to tarball ("make dist"), including the 'Mayavi2' directory, which is now installed under share/CitcomS. Also deleted 'Regionalmodule.c', which is no longer used. 06 December 2006, 01:08:58 UTC
57aeaf3 small changes in one image caption and in citation 06 December 2006, 00:49:49 UTC
f0944ca Fix for eggs not being installed by "make install" when builddir == srcdir. This change also re-fixes the setup.py infinite regress in a cleaner way. 06 December 2006, 00:42:34 UTC
ab08284 Added actions for ReduceFilter and ShowCapsFilter 06 December 2006, 00:18:47 UTC
59f42cb Require final release version of Pythia. Include egg-related files in release tarball ("make dist"). 05 December 2006, 23:13:27 UTC
f17e43c edited text and images placement in 5.8 05 December 2006, 20:46:57 UTC
770fe7c slghtly widened l. col in appendix a tables as using typewriter widened lines; fixed other formatting issues in appendices 05 December 2006, 20:34:19 UTC
9e69630 changing font style to typewriter small in appendix a tablesi and a few typos 05 December 2006, 20:11:44 UTC
8b31f43 small fixes to chap 4, text and table placement 05 December 2006, 19:19:02 UTC
e8ab235 making use of typewriter font and quotes consistent in appendix a 05 December 2006, 18:04:11 UTC
8ea8984 Updated Chapter 4 05 December 2006, 07:09:01 UTC
ea21745 Example h5 files including all optional output 05 December 2006, 06:17:15 UTC
66962d1 Forgot to update the makefile 05 December 2006, 06:14:50 UTC
35521dd Removed sections about HDFView. HDFView by default displays the dataset in a 2D table, which can be very confusing when working on multidimensional dataset. "h5ls -r" is a better tool for discovering the group structure and dataset dimension. 05 December 2006, 05:04:14 UTC
e8a02da * Renamed estimate.py to estimate_size.py * Added license text * Update for new HDF5 layout 05 December 2006, 04:19:42 UTC
318477c Changed code in A.1.1 and A.1.2 to use small font with typewriter style. 05 December 2006, 00:46:40 UTC
ee84bec Mentioned change of naming scheme for capfiles in NEWS 05 December 2006, 00:40:12 UTC
ad9f299 fixed quotes; added degree symbols as requested 05 December 2006, 00:31:25 UTC
0c3e62b Finished the GMT script section 05 December 2006, 00:14:58 UTC
c4f1afa Renamed "center" to "starting point" 04 December 2006, 23:47:57 UTC
90487f5 minor sentence/word form changes in 5.1 and 5.2 04 December 2006, 22:42:59 UTC
b3365ac reformatted column names in c.4.9 04 December 2006, 22:33:47 UTC
f4f3bca Revised Chapter 5 and Appendix A * Minor revision of post-processing * Update OpenDX section for new HDF5 layout * Briefly mentioned GMT scripts (unfinished) * Described new viscosity laws * Using Greek letter eta in the viscosity equations 04 December 2006, 22:19:15 UTC
2457cf3 fixed more quotes, fixed table breaks, lines in table missing, other minor format problems 04 December 2006, 20:33:20 UTC
1daa462 Added OpenHDF5 and OpenVTK actions for mayavi2 04 December 2006, 19:48:19 UTC
a7c9af3 Fixes to manual 04 December 2006, 17:24:39 UTC
d0d65c0 Fixed typos 04 December 2006, 17:24:24 UTC
192f787 Added vim modeline 04 December 2006, 16:54:12 UTC
02556dd Mayavi2 UI customizations 04 December 2006, 14:21:20 UTC
7fcb642 Added python module namespace for the citcoms mayavi2 plugins 04 December 2006, 14:11:12 UTC
586ea34 Removed executable permissions 04 December 2006, 13:43:01 UTC
33b38bf Update for new HDF5 layout 02 December 2006, 07:41:50 UTC
a822c42 * Removed obsolete parameters * Added new parameters * Only one "parameter=value" per line 02 December 2006, 07:14:16 UTC
59540cb Updated for new HDF5 layout 02 December 2006, 06:04:50 UTC
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