| d1cf3dd | Cyrille Rossant | 27 March 2017, 13:00:49 UTC | Minor fixes | 27 March 2017, 13:00:49 UTC |
| ce441ea | Cyrille Rossant | 10 February 2017, 18:37:33 UTC | Bump version | 10 February 2017, 18:37:33 UTC |
| 702c01f | Cyrille Rossant | 10 February 2017, 18:37:23 UTC | Fix .kwik extension in open file dialog | 10 February 2017, 18:37:23 UTC |
| e5df10d | Cyrille Rossant | 27 January 2017, 18:29:26 UTC | Update README.md | 27 January 2017, 18:29:26 UTC |
| ee61334 | Cyrille Rossant | 02 January 2017, 14:41:31 UTC | Update README.md | 02 January 2017, 14:41:31 UTC |
| 1af427c | Cyrille Rossant | 02 January 2017, 14:29:15 UTC | Update environment-osx.yml | 02 January 2017, 14:29:15 UTC |
| f2fcd7d | Cyrille Rossant | 29 September 2016, 12:20:50 UTC | Remove broken recluster action | 29 September 2016, 12:20:50 UTC |
| 0aaa814 | Cyrille Rossant | 09 September 2016, 09:37:08 UTC | Bump version | 09 September 2016, 09:37:08 UTC |
| ac78b82 | Cyrille Rossant | 09 September 2016, 09:36:58 UTC | Fix | 09 September 2016, 09:36:58 UTC |
| 147c1f2 | Cyrille Rossant | 09 September 2016, 09:15:42 UTC | Bump version | 09 September 2016, 09:15:42 UTC |
| 2e3de12 | Cyrille Rossant | 09 September 2016, 09:10:06 UTC | WIP: update install instructions | 09 September 2016, 09:10:06 UTC |
| 9641735 | Cyrille Rossant | 29 July 2016, 11:14:29 UTC | Fix bug with 1-channel data | 29 July 2016, 11:14:29 UTC |
| 81657af | Cyrille Rossant | 29 June 2016, 19:08:26 UTC | Add shank option when opening a dataset in KlustaViewa | 29 June 2016, 19:08:26 UTC |
| 57f1da3 | Cyrille Rossant | 27 June 2016, 07:24:05 UTC | Bump version | 27 June 2016, 07:24:05 UTC |
| ba8fa73 | Cyrille Rossant | 26 June 2016, 20:29:49 UTC | Fix | 26 June 2016, 20:29:49 UTC |
| 36e9ce6 | Cyrille Rossant | 26 June 2016, 20:23:22 UTC | Fix color-related bug introduced by previous PR on new kwik format | 26 June 2016, 20:23:22 UTC |
| 9be63cc | Cyrille Rossant | 23 June 2016, 12:37:11 UTC | Merge pull request #62 from svenvanderburg/fix-color-change Fix ability to change cluster colors | 23 June 2016, 12:37:11 UTC |
| 7c25bcb | svenvanderburg | 15 June 2016, 11:08:52 UTC | removed some unnecessary old code | 15 June 2016, 11:08:52 UTC |
| c1728a2 | svenvanderburg | 15 June 2016, 11:06:01 UTC | fix ability to change cluster colors | 15 June 2016, 11:06:01 UTC |
| b8b7012 | Cyrille Rossant | 30 March 2016, 12:04:15 UTC | Bump version | 30 March 2016, 12:04:15 UTC |
| 777d848 | Cyrille Rossant | 30 March 2016, 11:28:45 UTC | Sort spiketimes before computing CCGs | 30 March 2016, 11:28:45 UTC |
| 21f0b50 | Cyrille Rossant | 30 March 2016, 09:53:21 UTC | Fix dialog messages | 30 March 2016, 09:53:21 UTC |
| e921372 | Cyrille Rossant | 30 March 2016, 09:21:24 UTC | Remove Add trace view action | 30 March 2016, 09:21:24 UTC |
| 1ac080b | Cyrille Rossant | 25 March 2016, 10:47:34 UTC | Bump version | 25 March 2016, 10:47:34 UTC |
| e828a9a | Cyrille Rossant | 25 March 2016, 10:28:30 UTC | Fix CCG cache bug | 25 March 2016, 10:28:30 UTC |
| b9c43d2 | Cyrille Rossant | 24 March 2016, 13:52:29 UTC | Specify version in a single place | 24 March 2016, 13:52:29 UTC |
| fb3452a | Cyrille Rossant | 22 March 2016, 15:15:14 UTC | Bump version | 22 March 2016, 15:15:14 UTC |
| eeb83b1 | Cyrille Rossant | 22 March 2016, 13:13:49 UTC | Update README | 22 March 2016, 13:13:49 UTC |
| 6722dc8 | Cyrille Rossant | 22 March 2016, 13:12:13 UTC | Update README | 22 March 2016, 13:12:13 UTC |
| ee8ca51 | Cyrille Rossant | 21 March 2016, 15:44:14 UTC | Update setup.py | 21 March 2016, 15:44:14 UTC |
| 2197908 | Cyrille Rossant | 21 March 2016, 15:40:21 UTC | Ensure ncorrbins is odd | 21 March 2016, 15:40:21 UTC |
| 2ef38b8 | Cyrille Rossant | 21 March 2016, 15:35:42 UTC | Fixes | 21 March 2016, 15:35:42 UTC |
| d882e89 | Cyrille Rossant | 21 March 2016, 15:26:54 UTC | WIP: use pure Python CCG computation | 21 March 2016, 15:26:54 UTC |
| ac82a59 | Cyrille Rossant | 19 March 2016, 22:41:47 UTC | WIP: update to new klusta/phy kwik format | 19 March 2016, 22:41:47 UTC |
| ff7d1e4 | nippoo | 22 May 2015, 17:25:45 UTC | Merge pull request #51 from c-wilson/fix_issue_50 Fix issue 50 | 22 May 2015, 17:25:45 UTC |
| d841ff7 | Chris Wilson | 24 April 2015, 19:20:33 UTC | remove unneeded self.subsel reference | 24 April 2015, 19:20:33 UTC |
| ae0b3fb | Chris Wilson | 21 April 2015, 22:48:51 UTC | Stop using subselection for selection mask now that it is the right size. This was creating artifacts in the view. | 21 April 2015, 22:48:51 UTC |
| d8e40c4 | Chris Wilson | 21 April 2015, 21:55:48 UTC | Change FeatureView selection manager's selection mask to be the length of the displayed features. This prevents artifacts and crashes when using polygon to select spikes in FeatureView. | 21 April 2015, 21:55:48 UTC |
| d0c543a | Chris Wilson | 21 April 2015, 21:24:16 UTC | Takes a subset of the selection mask when updating FeatureView data. Now the arrays for data, masks, colors, and selections are all of the same length when drawn to GPU. This seems to fix intermittent segmentation fault issue. | 21 April 2015, 21:24:16 UTC |
| e1c02e8 | Max Hunter | 11 April 2015, 00:26:06 UTC | Bumped version to 0.3.0 | 11 April 2015, 00:26:06 UTC |
| 518c557 | nippoo | 10 April 2015, 17:17:53 UTC | Merge pull request #47 from klusta-team/optimization-similarity-matrix Optimizing and refactoring the computation of the similarity matrix | 10 April 2015, 17:17:53 UTC |
| dab2972 | Cyrille Rossant | 20 January 2015, 16:44:13 UTC | WIP: More robust handling of bad clusters. | 20 January 2015, 16:44:13 UTC |
| 0b3ae46 | Cyrille Rossant | 20 January 2015, 13:41:36 UTC | Added other half of the matrix. | 20 January 2015, 13:41:36 UTC |
| 1cac130 | Cyrille Rossant | 18 December 2014, 22:13:30 UTC | Implemented in the GUI. | 18 December 2014, 22:13:30 UTC |
| 0cc8f17 | Cyrille Rossant | 18 December 2014, 21:48:56 UTC | Some bug fixes. | 18 December 2014, 21:48:56 UTC |
| c57317e | Cyrille Rossant | 18 December 2014, 21:35:08 UTC | WIP: all tests pass. | 18 December 2014, 21:35:08 UTC |
| b8e701f | Cyrille Rossant | 18 December 2014, 21:27:48 UTC | WIP: Tests pass. | 18 December 2014, 21:27:48 UTC |
| 42c69d6 | Cyrille Rossant | 18 December 2014, 20:55:33 UTC | WIP. | 18 December 2014, 20:55:33 UTC |
| 33f6292 | Cyrille Rossant | 18 December 2014, 18:38:08 UTC | WIP: optimizing and refactoring the computation of the similarity matrix. | 18 December 2014, 18:38:08 UTC |
| 74c9d0e | Cyrille Rossant | 17 December 2014, 11:40:01 UTC | Fix in feature view: use the right 'nchannels'. | 17 December 2014, 11:40:01 UTC |
| b80aa5f | Cyrille Rossant | 17 December 2014, 11:17:46 UTC | Fix in similarity matrix. | 17 December 2014, 11:17:46 UTC |
| 3aa9e94 | Cyrille Rossant | 12 December 2014, 21:11:59 UTC | Merge pull request #46 from klusta-team/bump-version Bump version to 0.3.0.RC1 | 12 December 2014, 21:11:59 UTC |
| 3d54906 | Cyrille Rossant | 12 December 2014, 18:36:42 UTC | Merge pull request #40 from klusta-team/kwikskope_spikes KwikSkope spike display | 12 December 2014, 18:36:42 UTC |
| abb6b59 | Max Hunter | 12 December 2014, 18:28:31 UTC | TraceView doesn't return an error when no .raw.kwd | 12 December 2014, 18:28:31 UTC |
| 1aaaacd | Cyrille Rossant | 12 December 2014, 18:09:23 UTC | Bump version to 0.3.0.RC1. | 12 December 2014, 18:09:23 UTC |
| a6dfd54 | nippoo | 12 December 2014, 17:11:13 UTC | Merge pull request #41 from klusta-team/improve-similarity-matrix WIP: skipping similarity matrix computation when clusters are not similar enough | 12 December 2014, 17:11:13 UTC |
| f5feccc | Max Hunter | 12 December 2014, 16:18:52 UTC | No longer reopen saved TraceView on restart This is a workaround for a couple of bugs - one where TraceView windows can be hidden and somehow not show (but still consume RAM and CPU), and also another where files must be opened before TraceView, partly as another workaround for some Galry issues. | 12 December 2014, 16:18:52 UTC |
| 50c2b54 | nippoo | 12 December 2014, 16:17:52 UTC | Merge pull request #45 from klusta-team/less-spikes-feature-view Display less spikes in the feature view | 12 December 2014, 16:17:52 UTC |
| 3901b59 | Cyrille Rossant | 11 December 2014, 19:01:02 UTC | Added features_nspikes_per_cluster_max parameter. | 11 December 2014, 19:01:02 UTC |
| a0957b5 | Cyrille Rossant | 11 December 2014, 18:29:42 UTC | WIP: fixing bugs in feature view. | 11 December 2014, 18:29:42 UTC |
| 92c4791 | Cyrille Rossant | 11 December 2014, 17:41:08 UTC | WIP: displaying less spikes in the feature view. | 11 December 2014, 17:41:08 UTC |
| d3b437b | Cyrille Rossant | 08 December 2014, 14:01:04 UTC | WIP: skipping similarity matrix computation when clusters are not similar enough. | 08 December 2014, 14:01:04 UTC |
| 52000c3 | Max Hunter | 24 November 2014, 20:20:55 UTC | Merge branch 'kwik' | 24 November 2014, 20:20:55 UTC |
| 746081e | Max Hunter | 24 November 2014, 19:45:21 UTC | Faster TraceView spike cluster colouring | 24 November 2014, 19:45:21 UTC |
| 37045f4 | Max Hunter | 11 November 2014, 13:43:56 UTC | Always generate spike highlighted trace in TraceView for much faster toggling | 11 November 2014, 13:43:56 UTC |
| da05b14 | Max Hunter | 10 November 2014, 23:52:52 UTC | 1000-10000x speedup of spike highlighting by using bisect rather than np.searchsorted() | 10 November 2014, 23:52:52 UTC |
| 97aef31 | Max Hunter | 10 November 2014, 23:10:34 UTC | 5x speedup when generating spike highlight colourmap in TraceView due to use of np.searchsorted() | 10 November 2014, 23:10:34 UTC |
| a30e2f2 | Max Hunter | 07 November 2014, 15:12:14 UTC | TraceView now sets unlighlighted colour in traceview.py rather than kwiklib | 07 November 2014, 15:12:14 UTC |
| d3220c4 | Max Hunter | 06 November 2014, 23:44:58 UTC | TraceView spike-highlighting trace colour is now less bright for better contrast | 06 November 2014, 23:44:58 UTC |
| 123a3cc | Max Hunter | 06 November 2014, 22:57:06 UTC | TraceView now highlights spikes with correct cluster colours | 06 November 2014, 22:57:06 UTC |
| 8b310c9 | Max Hunter | 06 November 2014, 21:37:20 UTC | TraceView now highlights spikes only on masked channels | 06 November 2014, 21:37:20 UTC |
| 01b9218 | Cyrille Rossant | 30 October 2014, 20:30:43 UTC | Fix in the computation of the similarity matrix. | 30 October 2014, 20:30:43 UTC |
| 8eaa7b5 | Max Hunter | 27 October 2014, 20:17:29 UTC | Decreased undersampling to get round invisibility at high zoom bug | 27 October 2014, 20:17:29 UTC |
| b229fa5 | Max Hunter | 27 October 2014, 19:39:34 UTC | Toggle with S for spike visualisation on TraceView | 27 October 2014, 19:39:34 UTC |
| 7726a38 | Cyrille Rossant | 27 October 2014, 19:25:12 UTC | Tweaked KK parameters in recluster feature. | 27 October 2014, 19:25:12 UTC |
| 68485ee | Max Hunter | 27 October 2014, 18:23:03 UTC | Faster implementation of TraceView spikes in a separate thread | 27 October 2014, 18:23:03 UTC |
| 3bc26a9 | Max Hunter | 27 October 2014, 17:58:00 UTC | More Pythonic spike visualisation implementation on TraceVeiw | 27 October 2014, 17:58:00 UTC |
| 08693f6 | Cyrille Rossant | 27 October 2014, 17:37:49 UTC | Fixed normalization of the similarity matrix. | 27 October 2014, 17:37:49 UTC |
| 532465e | Max Hunter | 27 October 2014, 15:15:09 UTC | Removed TraceView spike line display due to tricky Galry bug | 27 October 2014, 15:15:09 UTC |
| 0398a46 | Cyrille Rossant | 27 October 2014, 13:17:17 UTC | Fix in wizard. | 27 October 2014, 13:17:17 UTC |
| 7a5e0d0 | Cyrille Rossant | 27 October 2014, 13:13:45 UTC | Fixing recluster/split2 bug when many new clusters are created. | 27 October 2014, 13:13:45 UTC |
| e41ca24 | Cyrille Rossant | 24 October 2014, 13:28:04 UTC | Updated computation of the similarity matrix. The new implementation is more stable numerically. | 24 October 2014, 13:28:04 UTC |
| bae7673 | Max Hunter | 23 October 2014, 13:03:43 UTC | Spike visualisation on TraceView (not working) | 23 October 2014, 13:03:43 UTC |
| fcea4b1 | Cyrille Rossant | 23 October 2014, 08:37:43 UTC | Bug fixes. | 23 October 2014, 08:37:43 UTC |
| 85e12b9 | Max Hunter | 20 October 2014, 16:55:09 UTC | Added in basic spike display in TraceView | 20 October 2014, 16:55:09 UTC |
| 6c909b3 | Max Hunter | 20 October 2014, 15:28:20 UTC | Merge branch 'kwik' of https://github.com/klusta-team/klustaviewa into kwik | 20 October 2014, 15:28:20 UTC |
| a508937 | Max Hunter | 20 October 2014, 15:28:06 UTC | Reinstated TraceView test | 20 October 2014, 15:28:06 UTC |
| da60c27 | Cyrille Rossant | 20 October 2014, 15:16:12 UTC | Fixed nwaveforms USER PREF issue. | 20 October 2014, 15:16:12 UTC |
| 742406a | Cyrille Rossant | 20 October 2014, 08:47:18 UTC | Fixing build script. | 20 October 2014, 08:47:18 UTC |
| 74263d7 | Cyrille Rossant | 20 October 2014, 08:38:47 UTC | Bumped version. | 20 October 2014, 08:38:47 UTC |
| 37bd989 | Cyrille Rossant | 20 October 2014, 08:36:30 UTC | Correlograms are now computed on evenly spaced chunks, to save computation times with huge datasets. | 20 October 2014, 08:36:30 UTC |
| 5fb02f9 | Max Hunter | 17 October 2014, 17:10:10 UTC | Merge branch 'kwik' of https://github.com/klusta-team/klustaviewa into kwik | 17 October 2014, 17:10:10 UTC |
| 41f9b6c | Max Hunter | 17 October 2014, 17:10:00 UTC | Removed extraneous print call | 17 October 2014, 17:10:00 UTC |
| 0b22a49 | Cyrille Rossant | 06 October 2014, 15:44:20 UTC | Merge pull request #38 from klusta-team/recluster Recluster feature | 06 October 2014, 15:44:20 UTC |
| 369003a | Cyrille Rossant | 06 October 2014, 15:43:35 UTC | Fixed failing test in cluster view. | 06 October 2014, 15:43:35 UTC |
| cf20109 | Max Hunter | 06 October 2014, 15:16:06 UTC | Merge branch 'kwikskope_fix' into kwik | 06 October 2014, 15:16:06 UTC |
| f502fb5 | Cyrille Rossant | 06 October 2014, 15:14:41 UTC | WIP: recluster. | 06 October 2014, 15:14:41 UTC |
| 3cc8358 | Max Hunter | 06 October 2014, 15:13:11 UTC | Restored TraceView in new format | 06 October 2014, 15:13:11 UTC |
| d901396 | Cyrille Rossant | 06 October 2014, 14:48:40 UTC | Fixed split2: use available cluster indices. | 06 October 2014, 14:48:40 UTC |
| 83db771 | Cyrille Rossant | 06 October 2014, 14:34:11 UTC | Fixed split2. | 06 October 2014, 14:34:11 UTC |
