https://github.com/naturalis/imgpheno

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Revision Author Date Message Commit Date
e5c23be adding analysis results 18 September 2019, 13:07:53 UTC
1b22bbe removed warning, removed line breaks 03 June 2019, 10:43:14 UTC
610cd2e ValueError: need more than 2 values to unpack 03 June 2019, 10:37:04 UTC
4ba5d50 ValueError: need more than 2 values to unpack 03 June 2019, 10:33:01 UTC
e985b7c removed dependency on output file 03 June 2019, 10:26:52 UTC
5de422d updated image path 03 June 2019, 09:32:21 UTC
3b45a50 merging 03 June 2019, 08:56:05 UTC
dfaec08 removing fann dependencies 03 June 2019, 08:55:03 UTC
5e25c8f creates unnecessary dependency on fann2 03 June 2019, 08:45:53 UTC
1770034 added decimals 29 April 2019, 20:58:16 UTC
767b8f0 Clean up of code and added comments 01 July 2018, 19:22:15 UTC
69730a0 Clean up of code with added comments 01 July 2018, 14:57:45 UTC
9aa31ad Stop ValueErrors for images without 4 points of perspective, instead leave error message 11 June 2018, 19:57:44 UTC
1c7b650 Best results with current changes to algorithm 31 May 2018, 09:41:26 UTC
2ea82e3 Changed installation directions to have opencv installed with pip instead of apt-get 18 May 2018, 12:32:37 UTC
ddca572 Resolved too many values to unpack error 18 May 2018, 12:24:23 UTC
940039a OpenCV 3.4.0 with Python 2.7.6 18 May 2018, 12:20:48 UTC
5892dd1 .travis.yml new opencv python pip package 18 May 2018, 12:15:19 UTC
2c3059c .travis.yml no system site packages 18 May 2018, 12:10:24 UTC
fde4209 .travis.yml with system site packages 18 May 2018, 12:05:00 UTC
66b3877 Using Python 2.7.9 for python-opencv version 3.4.0 18 May 2018, 12:00:00 UTC
a09b129 Avoid urllib3 insecureplatform warning 18 May 2018, 11:52:40 UTC
4b25e98 Update Python to 2.7.13 18 May 2018, 11:44:07 UTC
a72db9b Changes .travis.yml for OpenCv 3.4.0 18 May 2018, 11:40:37 UTC
d78a71a Specifically getting OpenCV 3.4.0 18 May 2018, 11:29:10 UTC
7f9e1f6 Resolved ValueErrors 18 May 2018, 11:23:57 UTC
dd87f9f Resolved test_features ValueError 18 May 2018, 11:14:01 UTC
b8fbcb5 Changes to README.rst and TUTORIAL.md because of compatibility with OpenCV3.4 18 May 2018, 11:10:16 UTC
ed30672 Updated .travis.yml for OpenCV 3.4 18 May 2018, 10:57:47 UTC
28c870a Compatible with versions 3.* of OpenCV 18 May 2018, 10:27:37 UTC
4bb3b5e Different size classes added Different sizing can now be set to True or False in YAML file 15 May 2018, 07:38:00 UTC
40b8c93 Added a better image of trap for analysis 20 April 2018, 16:17:39 UTC
3d8970e Tutorial file for running sticky-traps on command line 20 April 2018, 16:09:35 UTC
20100e7 Tutorial file to run sticky-traps.py on command line. 20 April 2018, 16:07:13 UTC
fa0777d Added functionality to run sticky-traps on command line. You can now specify the trap colour, size, and an output file. 20 April 2018, 14:59:20 UTC
5f4a8a5 Minor changes to aid in compatibility with package versions Changes made for openCV (2.4.13), so far still not working with newsest openCV version, and pyfann, which is now fann2. 20 April 2018, 07:45:37 UTC
eb92818 Update .travis.yml 11 July 2017, 09:17:52 UTC
b59af48 revert 11 July 2017, 09:14:06 UTC
e72f2dd Update README.rst 11 July 2017, 09:12:03 UTC
b7a2d31 Update .travis.yml 11 July 2017, 09:10:26 UTC
b4c7feb Merge branch 'master' of https://github.com/naturalis/imgpheno 08 May 2017, 15:23:25 UTC
6d9589f cv2.findContours returns 3 values in v3.1.0 08 May 2017, 19:05:51 UTC
654df44 Update __init__.py 08 May 2017, 19:00:09 UTC
530233f modified sticky-traps script and sticky-traps yml file 08 May 2017, 15:10:40 UTC
8f2762a Update __init__.py 04 May 2017, 12:43:28 UTC
41944d9 added settings file for sticky-traps.py and added functionality to crop edges from rescaled image 03 May 2017, 07:54:06 UTC
403c014 integrated two more functions; find_corners, and approximate_contour. 10 April 2017, 12:02:01 UTC
fb1fd65 renamed some functions 03 April 2017, 13:23:21 UTC
e8bd63a integrated sort_by_distance and perspective_transform into imgphenon 31 March 2017, 10:07:47 UTC
64059d8 Added sticky traps script 30 March 2017, 08:32:44 UTC
e6f7249 Added SURF features. 06 July 2016, 12:07:58 UTC
d9935f0 added simple ROI-based segmentation (for butterflies) 26 February 2016, 15:11:15 UTC
94e5c7f added skip pattern for pycharm .idea folder 23 February 2016, 14:12:39 UTC
163a2fd added section about unit testing 23 February 2016, 14:11:08 UTC
88c6d40 Updated some features 16 January 2015, 13:51:45 UTC
8cf5a70 Added an example script for color_bgr_means 30 December 2014, 14:12:42 UTC
6172f77 Fixed an example 14 November 2014, 15:50:40 UTC
788969f Fixed some wrong types 14 November 2014, 15:50:05 UTC
4cf19d6 Use the MIT license 07 October 2014, 09:30:42 UTC
e2382d2 Add a requirements.txt for easy pip installation 07 October 2014, 09:12:41 UTC
8e49783 Try installing OpenCV 2.4 from a 3rd party PPA Unit tests fail with OpenCV 2.3. 02 October 2014, 15:08:14 UTC
cb19b09 Introducing system_site_packages So that OpenCV from the repositories can be used. 02 October 2014, 14:50:08 UTC
a3bcd5d Renamed some repositories And added installation instructions. 18 September 2014, 13:05:00 UTC
510e658 Format this README in Markdown So that it doesn't conflict with Sphinx. 12 September 2014, 08:57:24 UTC
70b9ecf Return to 8 simultaneous make jobs Travis CI builds too slow. 12 September 2014, 08:39:56 UTC
896be84 Have Travis CI download an archive instead Should be much quicker than downloading the entire repository. Also lowered the number of simultaneous make jobs to 3, since Travis builds have up to two cores available (1.5*2). 12 September 2014, 08:13:57 UTC
4c9d381 Added a README for the docs/ directory 11 September 2014, 15:50:38 UTC
cf79748 Small updates 11 September 2014, 15:39:18 UTC
a43df32 Added Sphinx documentation 11 September 2014, 13:35:07 UTC
f5f2054 Preparing for packaging 11 September 2014, 13:19:50 UTC
8da2cef Package renamed to imgpheno 11 September 2014, 13:18:37 UTC
6d3c311 Fixed some constant names 18 July 2014, 11:08:30 UTC
7ca5882 Added another example script for the outline feature 18 July 2014, 11:01:01 UTC
c0193b5 Removed segmentation method from the library 18 July 2014, 10:59:13 UTC
452a3d8 Removed wrong use of naik_murthy_nonlinear 09 July 2014, 12:58:20 UTC
af5dbfa Don't process black pixels Black pixels should stay black anyway. 09 July 2014, 08:56:28 UTC
006c839 Implemented feature color:bgr_means 16 June 2014, 13:11:50 UTC
fc7b6dd Make sure the binary mask is for the largest contour 11 June 2014, 09:58:08 UTC
bcc1b6f Undo commit 34e525409ccb042578ff781093efc21dccd3c7ac It's easier to use a masked image as input, and it gives better results. 10 June 2014, 13:49:08 UTC
34e5254 Added a `mask` argument to naik_murthy_linear() 10 June 2014, 13:17:09 UTC
9f93df6 Small optimalization in example script 10 June 2014, 10:35:30 UTC
2409d0c Fixed the color space range for Luv There's no need to convert color ranges before using cvtColor(). 10 June 2014, 10:08:53 UTC
1de2934 Add color enhancement to training script 06 June 2014, 13:34:41 UTC
20b2a3e Implemented Naik & Murthy (2003) Included an example script. Not all enhanced images fully match the paper's yet. Implementation errors are probably present. 04 June 2014, 15:48:38 UTC
bb063ca BGR range needs to be scaled to 0..1 before converting to HSV or LUV 04 June 2014, 15:46:24 UTC
2dcc8b7 Small improvements for the trainer 28 May 2014, 14:36:28 UTC
26b4b6d Add options for the training algorithm and activation functions to the parameters file 27 May 2014, 19:33:28 UTC
c2e496f Some minor improvements 21 May 2014, 15:21:36 UTC
6afaf5f Improved error handling for the trainer 21 May 2014, 10:21:24 UTC
29791c9 Scale input images based on their perimeter 20 May 2014, 15:13:07 UTC
739936e Only export the largest contour when exporting masked images 20 May 2014, 13:36:46 UTC
333841d Fixed the segment script 16 May 2014, 14:23:38 UTC
dacd120 Updated the training script Changed some default values, added a new option to orchids.yml, and other minor changes. 16 May 2014, 12:39:20 UTC
55109c9 Updated the train and test script for shape:outline 14 May 2014, 17:06:52 UTC
76c28eb Improved return value for shape_outline() 14 May 2014, 13:20:20 UTC
2bb4dea Added a unit test for shape:outline 14 May 2014, 09:37:54 UTC
a65532b Fixed function shape_outline() The function didn't properly calculate the shape. An example script was added to verify the function. 13 May 2014, 15:48:36 UTC
3c840aa Travis has an old version of OpenCV Revert to getting OpenCV from GitHub. 13 May 2014, 09:10:06 UTC
9d097d5 Travis doesn't have package libopencv-core2.4 Try to install it indirectly via python-opencv 13 May 2014, 09:03:30 UTC
8a832c8 Have Travis install OpenCV via the package manager 13 May 2014, 09:00:20 UTC
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