| f33fde1 | Anita Caron | 22 March 2024, 16:57:59 UTC | 2024-03-22 release (#3245) Co-authored-by: Anita Caron <anitacaron@users.noreply.github.com> | 22 March 2024, 16:57:59 UTC |
| 0789375 | Anita Caron | 22 March 2024, 15:01:03 UTC | update external resources (#3244) Co-authored-by: Anita Caron <anitacaron@users.noreply.github.com> | 22 March 2024, 15:01:03 UTC |
| d542150 | Damien Goutte-Gattat | 22 March 2024, 11:33:47 UTC | Merge pull request #3152 from obophenotype/import-biomappings-sssom-cli Filter and reconcile the Biomappings set using sssom-cli | 22 March 2024, 11:33:47 UTC |
| ac7c161 | Damien Goutte-Gattat | 22 March 2024, 10:22:28 UTC | Merge branch 'master' into import-biomappings-sssom-cli | 22 March 2024, 10:22:28 UTC |
| 2fd97a2 | Anita Caron | 22 March 2024, 09:16:54 UTC | update odk 1.5 (#3242) Co-authored-by: Anita Caron <anitacaron@users.noreply.github.com> | 22 March 2024, 09:16:54 UTC |
| e0ca62d | Jim Balhoff | 08 March 2024, 08:56:23 UTC | Add id range for Jim Balhoff. (#3241) | 08 March 2024, 08:56:23 UTC |
| 90a9b72 | Damien Goutte-Gattat | 04 March 2024, 15:27:24 UTC | Merge pull request #3240 from obophenotype/fix-hao-inconsistency Remove mapping between UBERON:0014764 and HAO:0001525. | 04 March 2024, 15:27:24 UTC |
| 791ee85 | Damien Goutte-Gattat | 04 March 2024, 12:38:40 UTC | Remove mapping between UBERON:0014764 and HAO:0001525. Uberon's "anatomical line along groove" (UBERON:0014764) is an immaterial entity, so it shouldn't be mapped with HAO's "groove" (HAO:0001525) which is classified as an anatomical structure (material). This single mapping is responsible for the merge product of Uberon and HAO being completely inconsistent. closes #3239 | 04 March 2024, 12:38:40 UTC |
| 7d00d52 | Aleix Puig | 29 February 2024, 15:47:53 UTC | Fixes #3214 NTR urinary bladder regional terms (#3236) * Fixes #3214 NTR urinary bladder regional terms Fixes #3214 NTR urinary bladder regional terms * Fix ORCID | 29 February 2024, 15:47:53 UTC |
| 731359f | Aleix Puig | 29 February 2024, 10:02:01 UTC | Fixes #3200 revision of periderm (#3231) * Fixes #3200 revision of periderm Fixes #3200 revision of periderm * Fix typo | 29 February 2024, 10:02:01 UTC |
| 5338dd0 | Alida Avola | 28 February 2024, 14:23:01 UTC | Merge pull request #3235 from obophenotype/3224_typo_tonsillar_ring Fixes #3224 typo definition tonsillar ring | 28 February 2024, 14:23:01 UTC |
| 72dccbd | aleixpuig | 28 February 2024, 11:15:37 UTC | Fixes #3224 typo definition tonsillar ring Fixes #3224 typo definition tonsillar ring | 28 February 2024, 11:15:37 UTC |
| fc298a8 | Damien Goutte-Gattat | 26 February 2024, 10:36:44 UTC | Merge pull request #3233 from obophenotype/remove-intermediate-external-disjoints-owl Remove intermediate file `external-disjoints.owl` | 26 February 2024, 10:36:44 UTC |
| e564c03 | Damien Goutte-Gattat | 18 February 2024, 13:41:12 UTC | Remove copy_additional_files target. The only thing the `copy_additional_files` target does is copying the external-disjoints.obo component to the top-level `bridge` directory, which contains nothing but this single file. There should be no need for this. | 24 February 2024, 13:29:55 UTC |
| 0cc1b52 | Damien Goutte-Gattat | 18 February 2024, 13:39:28 UTC | Remove intermediate external-disjoints.owl file. There is no need to create a OWL version of the external-disjoints.obo component -- it is only ever used by ROBOT, which is perfectly able to read an OBO file directly. | 24 February 2024, 13:29:52 UTC |
| f5d0713 | Damien Goutte-Gattat | 21 February 2024, 20:11:59 UTC | Merge pull request #3230 from obophenotype/remove-custom-makeobo Remove custom OBO generation rule. | 21 February 2024, 20:11:59 UTC |
| b4b2128 | Damien Goutte-Gattat | 21 February 2024, 19:42:40 UTC | Merge branch 'master' into remove-custom-makeobo | 21 February 2024, 19:42:40 UTC |
| 4f5c72b | Ray Stefancsik | 21 February 2024, 08:21:54 UTC | Assert the exocrine pancreas to be part of the digestive system (#3227) * Assert the exocrine pancreas to be part of the digestive system * UBERON:0001007 'exocrine pancreas' Fix #3208 * Restore uberon-edit.obo from master branch * Reimplement assertion that pancreas is part of the digestive system | 21 February 2024, 08:21:54 UTC |
| 66a257a | Damien Goutte-Gattat | 18 February 2024, 12:45:49 UTC | Remove custom OBO generation rule. In a few places, when generating OBO files from OWL files, we use a custom OWLTOOLS-based command instead of relying of the default OWL-to-OBO rule set forth in the ODK. There should be no need for such custom rules, so we remove them here. closes #3014 | 20 February 2024, 20:04:16 UTC |
| 67d9f29 | Damien Goutte-Gattat | 20 February 2024, 18:25:34 UTC | Merge pull request #3126 from obophenotype/3056-fix-duplicate-mappings 3056 Fix duplicate mappings | 20 February 2024, 18:25:34 UTC |
| 71eb540 | Anita Caron | 20 February 2024, 17:52:17 UTC | 2024-02-20 release (#3226) Co-authored-by: Anita Caron <anitacaron@users.noreply.github.com> | 20 February 2024, 17:52:17 UTC |
| b3e77e4 | Damien Goutte-Gattat | 20 February 2024, 13:44:52 UTC | Merge pull request #3225 from obophenotype/update-ontobot-workflow Use a dedicated token for the ontobot workflow. | 20 February 2024, 13:44:52 UTC |
| 68c9827 | Damien Goutte-Gattat | 20 February 2024, 11:02:15 UTC | Use a dedicated token for the ontobot workflow. This commit updates the ontobot workflow (`auto-pr-ontobot`) to make it use a dedicated authentication token, rather than the default GITHUB_TOKEN. This should ensures that PRs created by the bot can trigger other workflows, notably the CI workflow. related to #3223 | 20 February 2024, 11:02:15 UTC |
| f007459 | Nicole Vasilevsky | 19 February 2024, 15:30:30 UTC | Merge pull request #3220 from obophenotype/#3076-synonyms-to-orbital-fat-pad- add synonym adipose bod of the orbit and adipose tissue of ocular region | 19 February 2024, 15:30:30 UTC |
| 177e46a | Aleix Puig | 19 February 2024, 11:48:11 UTC | Fixes #3221 import RO vessel relationships and refresh imports (#3222) * Add RO terms to file * Refresh imports * Refresh merged imports | 19 February 2024, 11:48:11 UTC |
| 41381d1 | paulacalipho | 19 February 2024, 06:42:06 UTC | fixes #3076 add synonym adipose bod of the orbit and adipose tissue of ocular region | 19 February 2024, 06:42:06 UTC |
| 42db0c1 | Damien Goutte-Gattat | 16 February 2024, 15:28:22 UTC | Merge branch 'master' into 3056-fix-duplicate-mappings | 16 February 2024, 15:28:22 UTC |
| 0c3a02a | Damien Goutte-Gattat | 16 February 2024, 15:22:21 UTC | Merge pull request #3207 from obophenotype/remove-consider-wikipedia Remove `consider` tags pointing to Wikipedia pages | 16 February 2024, 15:22:21 UTC |
| 9300342 | Aleix Puig | 16 February 2024, 14:30:35 UTC | Merge branch 'master' into remove-consider-wikipedia | 16 February 2024, 14:30:35 UTC |
| f7f9481 | Damien Goutte-Gattat | 16 February 2024, 14:22:50 UTC | Merge pull request #3218 from obophenotype/misc-obsoletions-2 Obsolete and merge a handful of redundant terms | 16 February 2024, 14:22:50 UTC |
| 7eeebd0 | Damien Goutte-Gattat | 16 February 2024, 13:23:38 UTC | Merge branch 'master' into misc-obsoletions-2 | 16 February 2024, 13:23:38 UTC |
| e126ea7 | Damien Goutte-Gattat | 16 February 2024, 13:18:30 UTC | Merge pull request #3191 from obophenotype/fix-insect-dorsal-ectoderm-derivative Fix classification of 'insect dorsal ectoderm derivative'. | 16 February 2024, 13:18:30 UTC |
| ec2d4b6 | Damien Goutte-Gattat | 15 February 2024, 12:39:01 UTC | Restore some Wikipedia consider tags as xrefs. “We never know. If we can keep the information, it’s always better.” Because the purpose of Uberon is to KEEP INFORMATION. Always. | 15 February 2024, 12:39:01 UTC |
| b0dc61f | Damien Goutte-Gattat | 15 February 2024, 12:24:39 UTC | Merge branch 'master' into remove-consider-wikipedia | 15 February 2024, 12:24:39 UTC |
| 7dd42c0 | Damien Goutte-Gattat | 14 February 2024, 17:10:00 UTC | Remove redundant exact synonym. Term UBERON:0004760 is labelled as "gland of anal canal", so it does not need an exact synonym of "gland of anal canal" -- this is probably a remnant of a time where the term had another label. | 14 February 2024, 17:53:14 UTC |
| a45e888 | Damien Goutte-Gattat | 14 February 2024, 17:08:58 UTC | Add synonyms for obsoleted terms. | 14 February 2024, 17:53:07 UTC |
| ea756a1 | Damien Goutte-Gattat | 29 January 2024, 16:08:37 UTC | Obsolete 'common crus'. The term 'common crus' was created as a generalised version of the eponym ZFA term (defined as the "duct that forms when the nonampullary ends of the posterior and anterior semicircular canals merge"). It seems redundant with 'common crus of semicircular ducts' (defined as "a nonampullary end of the superior or posterior semicircular ducts"). There does not seem to be any other "common crus" than those of the semicircular ducts. We obsolete 'common crus' and merge it into 'common crus of semicircular ducts'. closes #3161 | 14 February 2024, 17:52:57 UTC |
| 6e2ac20 | Damien Goutte-Gattat | 29 January 2024, 16:04:47 UTC | Obsolete 'telencephalic tracts'. The term 'telencephalic tracts' was created as a generalised version of the ZFA term 'telencephalic white matter' (defined as "CNS white matter that is part of the telencephalon"). It seems redundant with 'white matter of telencephalon' (defined as "a portion of white matter that is part of a telencephalon"). We obsolete 'telencephalic tracts' and merge it with 'white matter of telencephalon'. closes #3160 | 14 February 2024, 17:52:48 UTC |
| 029e94c | Damien Goutte-Gattat | 29 January 2024, 15:58:02 UTC | Obsolete 'gland of anal sac'. The terms 'gland of anal sac' and 'gland of anal canal' seem to refer to the same thing. They both cross-reference the same Wikipedia page, the same NCIT and UMLS terms, and have both 'anal gland' as related synonym. We obsolete the former and merge it into the latter. closes #3159 | 14 February 2024, 17:52:37 UTC |
| b06e5c8 | Damien Goutte-Gattat | 29 January 2024, 15:51:30 UTC | Obsolete 'thymus subunit'. The term 'thymus subunit' is redundant with 'thymus lobe', so we obsolete it and replace it with 'thymus lobe'. closes #3158 | 14 February 2024, 17:52:24 UTC |
| 9fcc161 | Damien Goutte-Gattat | 29 January 2024, 15:47:10 UTC | Obsolete 'vitelline venous plexus'. The terms 'vitelline venous plexus' and 'venous vitelline plexus' are completely identifical except for the order of adjectives in the label. We obsolete the former and merge it into the latter. closes #3157 | 14 February 2024, 17:52:16 UTC |
| 40d7b9c | Damien Goutte-Gattat | 29 January 2024, 15:14:55 UTC | Obsolete 'optic eminence surface ectoderm'. The terms 'optic eminence surface ectoderm' and 'optic eminence ectoderm' appear to refer to the same concept, so we obsolete the former and merge it into the latter. closes #3156 | 14 February 2024, 17:52:09 UTC |
| 10daf1f | Aleix Puig | 08 February 2024, 14:12:27 UTC | Fixes #3202 and #3203 spleen hierarchy (#3205) Fixes #3202 Fixes #3203 | 08 February 2024, 14:12:27 UTC |
| 12f5595 | Damien Goutte-Gattat | 08 February 2024, 12:00:38 UTC | Remove consider tags pointing to Wikipedia pages Wikipedia pages are not suitable substitutes for obsoleted terms. They are not and should not be considered to be identifiers. All the terms carried those tags already have other `consider` tags pointing to other ontological terms, so those Wikipedia-pointing tags don’t bring anything useful. closes #3206 | 08 February 2024, 12:00:38 UTC |
| 0435f95 | Damien Goutte-Gattat | 08 February 2024, 11:57:33 UTC | Merge pull request #3201 from obophenotype/remove-basic-owl Remove basic.owl and metazoan-view.owl | 08 February 2024, 11:57:33 UTC |
| f47008f | Aleix Puig | 08 February 2024, 10:13:36 UTC | Fixes #3046 text definition kidney (#3204) Fixes #3046 text definition kidney | 08 February 2024, 10:13:36 UTC |
| a03f16b | Damien Goutte-Gattat | 07 February 2024, 14:58:49 UTC | Commit re-generated Makefile. | 07 February 2024, 14:58:49 UTC |
| 6139911 | Damien Goutte-Gattat | 07 February 2024, 14:56:01 UTC | Stop producing the metazoan-view.owl subset. What we pretend to be a 'metazoan subset' is actually uberon-basic, so let's not waste time and disk space creating a copy for nothing. If people need a metazoan-view.owl file, we can add a PURL redirection to uberon-basic.owl. | 07 February 2024, 14:56:01 UTC |
| e5f6bbf | Damien Goutte-Gattat | 07 February 2024, 14:52:09 UTC | Replace all references to the basic.owl product. Update all goals that depend on the basic.owl product to make them depend on the uberon-basic.owl (which is the same thing) instead. | 07 February 2024, 14:52:09 UTC |
| c82ac09 | Damien Goutte-Gattat | 07 February 2024, 14:47:04 UTC | Stop producing the basic.owl artifact. The custom release product 'basic.owl' is, by construction, exactly the same as the standard product 'uberon-basic.owl' and is, therefore, pointless and be removed. | 07 February 2024, 14:47:04 UTC |
| 78d8c18 | Damien Goutte-Gattat | 30 January 2024, 16:05:27 UTC | Merge pull request #3127 from obophenotype/switch-fma-bridge-to-official-purls Use official PURLs for the FMA bridge. | 30 January 2024, 16:05:27 UTC |
| b994110 | Damien Goutte-Gattat | 30 January 2024, 13:41:48 UTC | Merge branch 'master' into fix-insect-dorsal-ectoderm-derivative | 30 January 2024, 13:41:48 UTC |
| 40d6aab | Damien Goutte-Gattat | 30 January 2024, 13:10:54 UTC | Merge branch 'master' into 3056-fix-duplicate-mappings | 30 January 2024, 13:10:54 UTC |
| 3ee703b | Damien Goutte-Gattat | 30 January 2024, 13:10:20 UTC | Merge branch 'master' into switch-fma-bridge-to-official-purls | 30 January 2024, 13:10:20 UTC |
| 91d201b | Damien Goutte-Gattat | 26 January 2024, 16:28:36 UTC | Merge pull request #3194 from obophenotype/remove-dubious-mereological-sums Remove axioms for dubious merelogical sums. | 26 January 2024, 16:28:36 UTC |
| 40489a2 | Damien Goutte-Gattat | 23 January 2024, 11:01:46 UTC | Fix classification of 'insect dorsal ectoderm derivative'. The term 'insect dorsal ectoderm derivative' should not be classified as a 'multicellular anatomical structure', as there can be (and indeed, there are) derivates of the dorsal ectoderm that are single cells (such as histoblasts) or even acellular structures (such as apodemes). We classify it as am 'ectoderm-derived structure' instead. We also add a definition that was missing for that term. closes #3190 | 23 January 2024, 11:01:46 UTC |
| 9519063 | Damien Goutte-Gattat | 19 January 2024, 17:49:43 UTC | Remove axioms for dubious merelogical sums. Some of the mereological sums expressed in the disjoint_union_over.owl component may be bogus if: * there can exist a structure that is part of the whole but overlaps more than one part, or * the whole may contain other parts that are not listed in the sum. We remove all equivalence axioms for sums where we cannot positively confirm that the statements above do not apply. Related to #3181. | 19 January 2024, 17:49:43 UTC |
| 2b32ef6 | Damien Goutte-Gattat | 19 January 2024, 17:43:35 UTC | Merge branch 'master' into 3056-fix-duplicate-mappings | 19 January 2024, 17:43:35 UTC |
| 08e491d | Anita Caron | 18 January 2024, 15:59:52 UTC | 20240118 release (#3187) Co-authored-by: Anita Caron <anitacaron@users.noreply.github.com> | 18 January 2024, 15:59:52 UTC |
| d2e0884 | Anita Caron | 18 January 2024, 11:43:14 UTC | update imports and bridges (#3186) Co-authored-by: Anita Caron <anitacaron@users.noreply.github.com> | 18 January 2024, 11:43:14 UTC |
| 632c46c | Damien Goutte-Gattat | 17 January 2024, 16:29:11 UTC | Merge pull request #3185 from obophenotype/componentize-disjoint_union_over Turn `disjoint_union_over` into a proper ODK component | 17 January 2024, 16:29:11 UTC |
| 73ec1da | Aleix Puig | 17 January 2024, 15:59:39 UTC | Merge pull request #3179 from obophenotype/3178_placental_terms Fixes #3178 NTR placental terms | 17 January 2024, 15:59:39 UTC |
| b837ad6 | Damien Goutte-Gattat | 17 January 2024, 15:50:22 UTC | Fix IRI of disjoint_union_over. The declared ontology IRI of the disjoint_union_over component must match the IRI of the import declaration, otherwise Protégé will not load the component properly. | 17 January 2024, 15:50:22 UTC |
| da63166 | Damien Goutte-Gattat | 17 January 2024, 15:15:21 UTC | Commit re-generated Makefile. | 17 January 2024, 15:15:21 UTC |
| 20e1ed3 | Damien Goutte-Gattat | 17 January 2024, 15:11:24 UTC | Declare disjoint_union_over as a proper ODK component. Declare 'components/disjoint_union_over.owl' as a ODK-managed component. Do not explicitly merge it in the OWLSRC preprocessing step (it will still be merged at this point, because it is imported in the -edit file). | 17 January 2024, 15:14:30 UTC |
| 347b121 | Damien Goutte-Gattat | 17 January 2024, 15:07:34 UTC | Import the disjoint_union_over component into the -edit file. We import the disjoint_over_union component into the -edit file, so that the axioms it contains are visible from editors when they work on the ontology (e.g. from Protégé). | 17 January 2024, 15:07:34 UTC |
| b4f3d32 | Damien Goutte-Gattat | 17 January 2024, 15:04:33 UTC | Change extension of disjoint_union_over component. Rename the `disjoint_union_over` component to give it a `.owl` extension. Other components written in OWL functional syntax uses the `.owl` extension, no reason to single that component out. The ontology IRI inside that component is itself using a `.owl` extension, so let's align the filename with the IRI. | 17 January 2024, 15:04:33 UTC |
| 5cd0326 | Aleix Puig | 17 January 2024, 14:26:55 UTC | Merge branch 'master' into 3178_placental_terms | 17 January 2024, 14:26:55 UTC |
| 0775953 | Anita Caron | 17 January 2024, 14:26:17 UTC | only trigger qc when any file inside `src` folder is changed (#3184) Co-authored-by: Anita Caron <anitacaron@users.noreply.github.com> | 17 January 2024, 14:26:17 UTC |
| d07bec4 | Aleix Puig | 17 January 2024, 13:21:12 UTC | Merge branch 'master' into 3178_placental_terms | 17 January 2024, 13:21:12 UTC |
| 5cbf2c8 | Anita Caron | 17 January 2024, 13:20:47 UTC | Temporary fix for docker setup timeout (#3182) * update github actions' version * temporary fix for timeout issue in docker setup gha --------- Co-authored-by: Anita Caron <anitacaron@users.noreply.github.com> | 17 January 2024, 13:20:47 UTC |
| c764536 | Aleix Puig | 17 January 2024, 10:53:44 UTC | Merge branch 'master' into 3178_placental_terms | 17 January 2024, 10:53:44 UTC |
| 9d94885 | Damien Goutte-Gattat | 17 January 2024, 10:48:37 UTC | Merge pull request #3177 from obophenotype/make-composite-stripping-optional Allow to optionally keep disjointness axioms when building composite products. | 17 January 2024, 10:48:37 UTC |
| 322cc19 | aleixpuig | 17 January 2024, 09:54:04 UTC | Fix definition | 17 January 2024, 09:54:04 UTC |
| 27747f2 | aleixpuig | 16 January 2024, 19:01:57 UTC | Fixes #3178 NTR placental terms Fixes #3178 NTR placental terms | 16 January 2024, 19:01:57 UTC |
| edbadda | Damien Goutte-Gattat | 16 January 2024, 13:23:15 UTC | Allow to keep disjointness axioms when building composite products. All composite-* products are built by, among other operations, stripping any disjointness axiom in the merged ontology. This is necessary as most composite-* products would be impossible to build otherwise (the merge-species step requires the ontology to be consistent, and most of the collected-* merges are not because of incompatibilities between Uberon and one or several of the taxon-specific ontologies). This will not change anytime soon, but we should still at least *aim* to achieve inter-ontology consistency in the (far) future. This has already been achieved at least for the composite-drosophila product (Uberon + CL + FBbt), so it _is_ possible. This commit makes the removal of the disjointness axioms optional, so one can easily try to build a composite-* product with the disjointness axioms still in place. Simply run the pipeline with COMPOSITE_STRIP_DISJOINTS=false, e.g. sh run.sh make composite-mouse.owl COMPOSITE_STRIP_DISJOINTS=false For most products this is likely to fail, but this gives us an easy way to _test_ building with disjointness axioms in place, so that we can start addressing the inconsistency issues. | 16 January 2024, 13:23:15 UTC |
| fe6f488 | Aleix Puig | 16 January 2024, 09:29:29 UTC | Merge pull request #3173 from obophenotype/3105_descending_thin_limb_loop_Henle Fixes #3105 NTR descending thin limb of loop of Henle subclasses | 16 January 2024, 09:29:29 UTC |
| b77a338 | Damien Goutte-Gattat | 15 January 2024, 20:46:29 UTC | Merge pull request #3174 from obophenotype/add-license Add LICENSE file. | 15 January 2024, 20:46:29 UTC |
| 9c427dc | Damien Goutte-Gattat | 15 January 2024, 20:29:21 UTC | Add LICENSE file. This commit adds the full text of the Creative Commons Attribution 3.0 Unported license in a new LICENSE file at the root of the repository. This does NOT change the license used by Uberon. Uberon IS already using the CC BY 3.0 Unported license right now (as indicated by an annotation in the -edit file). This commit simply makes the license more obvious. | 15 January 2024, 20:35:36 UTC |
| 9734017 | aleixpuig | 15 January 2024, 14:56:42 UTC | Add contributor | 15 January 2024, 14:56:42 UTC |
| 2f388e4 | aleixpuig | 15 January 2024, 13:42:54 UTC | Fixes #3105 NTR descending thin limb of loop of Henle subclasses Fixes #3105 NTR descending thin limb of loop of Henle subclasses | 15 January 2024, 13:42:54 UTC |
| f36e562 | Aleix Puig | 11 January 2024, 09:21:31 UTC | Merge pull request #3170 from obophenotype/3130_intestinal_lamina_propria Fixes #3130 NTR intestinal lamina propria terms | 11 January 2024, 09:21:31 UTC |
| f12b995 | aleixpuig | 09 January 2024, 16:56:21 UTC | Fixes #3130 NTR intestinal lamina propria terms Fixes #3130 NTR intestinal lamina propria terms | 09 January 2024, 16:56:21 UTC |
| 8fbd58f | Damien Goutte-Gattat | 08 January 2024, 13:04:37 UTC | Merge pull request #3168 from obophenotype/remove-caro-from-composite Remove the CARO bridges from the composite pipeline. | 08 January 2024, 13:04:37 UTC |
| 388e87a | Damien Goutte-Gattat | 08 January 2024, 10:42:19 UTC | Remove the CARO bridges from the composite pipeline. This commit amends the composite pipeline so that the CARO bridges to Uberon and CL are no longer included in any composite-* product. CARO has been superseded by Uberon itself, so merging those bridges should no longer be necessary. The bridges themselves are still kept for whoever might need them. closes #3139 | 08 January 2024, 10:42:19 UTC |
| 211e9f6 | PaulaDuekRoggli | 07 January 2024, 14:37:09 UTC | Merge pull request #3167 from obophenotype/#3145-NTR-lateral-wall-of-nasal-cavity add 'lateral wall of nasal cavity' | 07 January 2024, 14:37:09 UTC |
| 0664fb1 | paulacalipho | 05 January 2024, 16:06:49 UTC | Merge branch '#3145-NTR-lateral-wall-of-nasal-cavity' of https://github.com/obophenotype/uberon into #3145-NTR-lateral-wall-of-nasal-cavity | 05 January 2024, 16:06:49 UTC |
| fb54026 | paulacalipho | 05 January 2024, 16:06:09 UTC | Update uberon-edit.obo | 05 January 2024, 16:06:09 UTC |
| 5f4ee6e | Aleix Puig | 05 January 2024, 15:44:43 UTC | Merge branch 'master' into #3145-NTR-lateral-wall-of-nasal-cavity | 05 January 2024, 15:44:43 UTC |
| 1495e02 | paulacalipho | 05 January 2024, 15:05:10 UTC | Update uberon-edit.obo | 05 January 2024, 15:05:10 UTC |
| 2fafba4 | Aleix Puig | 05 January 2024, 14:57:40 UTC | Merge pull request #3166 from obophenotype/3131_NTR_placental_chorionic_villi Addresses #3131 NTR placental chorionic villi terms | 05 January 2024, 14:57:40 UTC |
| 5904cca | paulacalipho | 05 January 2024, 14:27:59 UTC | Update uberon-edit.obo | 05 January 2024, 14:27:59 UTC |
| 460823f | aleixpuig | 05 January 2024, 12:59:00 UTC | Add RO:0002203 develops_into to Uberon | 05 January 2024, 12:59:00 UTC |
| 042b654 | aleixpuig | 05 January 2024, 12:21:35 UTC | Merge branch '3131_NTR_placental_chorionic_villi' of https://github.com/obophenotype/uberon into 3131_NTR_placental_chorionic_villi | 05 January 2024, 12:21:35 UTC |
| f8532ed | aleixpuig | 05 January 2024, 12:21:07 UTC | Fix glitch | 05 January 2024, 12:21:07 UTC |
| 00fd564 | Aleix Puig | 05 January 2024, 12:12:53 UTC | Merge branch 'master' into 3131_NTR_placental_chorionic_villi | 05 January 2024, 12:12:53 UTC |
| 2cda94f | aleixpuig | 05 January 2024, 12:11:17 UTC | Fix typos | 05 January 2024, 12:11:17 UTC |
| b7d189c | Aleix Puig | 05 January 2024, 11:34:06 UTC | Merge pull request #2949 from obophenotype/2920_NTR_placental_villous_stroma Addresses #2920 NTR placental villous stroma | 05 January 2024, 11:34:06 UTC |
| 8cea659 | PaulaDuekRoggli | 04 January 2024, 09:36:17 UTC | Merge pull request #3164 from obophenotype/#3142-NTR-neck-of-pancreas add new term neck of pancreas | 04 January 2024, 09:36:17 UTC |
| 0688c1e | Aleix Puig | 04 January 2024, 09:05:20 UTC | Merge branch 'master' into #3142-NTR-neck-of-pancreas | 04 January 2024, 09:05:20 UTC |
