92edfcd | Herbert Sauro | 18 August 2021, 19:44:18 UTC | Update requirements.txt Fixed libsbml requirement | 18 August 2021, 19:44:18 UTC |
2f2d88c | Herbert Sauro | 18 August 2021, 19:38:08 UTC | Update README.md | 18 August 2021, 19:38:08 UTC |
a311c06 | hsauro | 18 August 2021, 17:37:35 UTC | updated documention | 18 August 2021, 17:37:35 UTC |
80d4a6b | hsauro | 03 June 2021, 23:55:43 UTC | Increased support to Python 3.6 | 03 June 2021, 23:55:43 UTC |
b105c62 | hsauro | 17 May 2021, 19:30:28 UTC | Fixing libsbml dependency | 17 May 2021, 19:30:28 UTC |
184eaa5 | Herbert Sauro | 15 September 2020, 00:28:58 UTC | Add simplesbml.tests.run() to make it easy to run the tests | 15 September 2020, 00:28:58 UTC |
e0bad9d | Herbert Sauro | 14 September 2020, 22:12:15 UTC | Include tests with installation, third attempt | 14 September 2020, 22:12:15 UTC |
b4523b6 | Herbert Sauro | 14 September 2020, 22:06:25 UTC | Added codec import | 14 September 2020, 22:06:25 UTC |
80b3c15 | Herbert Sauro | 14 September 2020, 22:03:50 UTC | Added propoer version mechanism | 14 September 2020, 22:03:50 UTC |
55e55b2 | Herbert Sauro | 14 September 2020, 21:52:11 UTC | Include tests with installation again again | 14 September 2020, 21:52:11 UTC |
468c779 | Herbert Sauro | 14 September 2020, 20:27:47 UTC | Include tests with installation again | 14 September 2020, 20:27:47 UTC |
9dd2252 | Herbert Sauro | 14 September 2020, 20:21:38 UTC | Include tests with installation | 14 September 2020, 20:21:38 UTC |
1e1637e | Herbert Sauro | 13 September 2020, 01:22:38 UTC | Updated readme.md | 13 September 2020, 01:22:38 UTC |
a3d2136 | Herbert Sauro | 13 September 2020, 01:17:36 UTC | Updated readme.md | 13 September 2020, 01:17:36 UTC |
d9f30b8 | Herbert Sauro | 11 September 2020, 19:32:42 UTC | Updated doc files to include loadsbmlstr and loadsbmlfile | 11 September 2020, 19:32:42 UTC |
53a10b5 | Herbert Sauro | 03 September 2020, 16:49:42 UTC | Updated docs | 03 September 2020, 16:49:42 UTC |
c924b21 | Herbert Sauro | 03 September 2020, 16:43:48 UTC | Changed dir test to tests | 03 September 2020, 16:43:48 UTC |
af379fc | Herbert Sauro | 03 September 2020, 16:40:03 UTC | Updated readme.md | 03 September 2020, 16:40:03 UTC |
9b55d66 | Herbert Sauro | 03 September 2020, 16:38:40 UTC | Rearranged test files | 03 September 2020, 16:38:40 UTC |
bfd11dc | Herbert Sauro | 03 September 2020, 16:36:22 UTC | Added example to the docs and bumped verison to 2.0.0 | 03 September 2020, 16:36:22 UTC |
9ab58ea | Herbert Sauro | 03 September 2020, 16:31:21 UTC | Changed getListOfRules to getListOfRuleIds | 03 September 2020, 16:31:21 UTC |
ac1f5a2 | Herbert Sauro | 03 September 2020, 16:22:58 UTC | Added example script | 03 September 2020, 16:22:58 UTC |
3294ab4 | Herbert Sauro | 03 September 2020, 16:21:13 UTC | Fixd typos | 03 September 2020, 16:21:13 UTC |
4b78c1d | Herbert Sauro | 02 September 2020, 19:44:52 UTC | changed getListOfParameters to getListOfParameterIds | 02 September 2020, 19:44:52 UTC |
440f540 | Herbert Sauro | 02 September 2020, 19:23:59 UTC | Add error checking to getReactantStoichiometry and getProductStoichiometry | 02 September 2020, 19:23:59 UTC |
bf54e5f | Herbert Sauro | 02 September 2020, 19:18:24 UTC | getListOfReactions changed to getListOfReactionIds | 02 September 2020, 19:18:24 UTC |
6306232 | Herbert Sauro | 02 September 2020, 19:14:37 UTC | Redesigned the test system again | 02 September 2020, 19:14:37 UTC |
c456cd9 | Herbert Sauro | 02 September 2020, 01:14:00 UTC | Rmeove testfiles, replace with test | 02 September 2020, 01:14:00 UTC |
6d2ef89 | Herbert Sauro | 02 September 2020, 01:13:17 UTC | Bug fixes | 02 September 2020, 01:13:17 UTC |
887377e | Herbert Sauro | 31 August 2020, 00:19:16 UTC | And a bunch of methods for supporting sbml2Matlab package | 31 August 2020, 00:19:16 UTC |
f67cf8d | Herbert Sauro | 30 August 2020, 00:08:30 UTC | Update README.md | 30 August 2020, 00:08:30 UTC |
701dab2 | Herbert Sauro | 30 August 2020, 00:08:14 UTC | Update README.md | 30 August 2020, 00:08:14 UTC |
232e69b | Herbert Sauro | 30 August 2020, 00:05:19 UTC | And bump up the setup.py version number | 30 August 2020, 00:05:19 UTC |
b0cdfb7 | Herbert Sauro | 30 August 2020, 00:03:36 UTC | Forgot to update __init__.py | 30 August 2020, 00:03:36 UTC |
2cf07e3 | Herbert Sauro | 30 August 2020, 00:02:10 UTC | Bumped version to 1.3.3 | 30 August 2020, 00:02:10 UTC |
2ec270d | Herbert Sauro | 30 August 2020, 00:00:37 UTC | Capitalised SbmlModel class, added more helper functions | 30 August 2020, 00:00:37 UTC |
6a1c0da | Herbert Sauro | 29 August 2020, 02:09:37 UTC | Fixed stupid but in getModelId | 29 August 2020, 02:09:37 UTC |
0f1dac0 | Herbert Sauro | 29 August 2020, 01:01:35 UTC | Typo in getListOfModifiers | 29 August 2020, 01:01:35 UTC |
a96f22e | Herbert Sauro | 29 August 2020, 00:37:08 UTC | Added support for modifiers | 29 August 2020, 00:37:08 UTC |
aa59446 | Herbert Sauro | 29 August 2020, 00:35:08 UTC | I minor change | 29 August 2020, 00:35:08 UTC |
f4c48af | Herbert Sauro | 27 August 2020, 22:29:45 UTC | fixed typo in __init__.py | 27 August 2020, 22:29:45 UTC |
d0b7250 | Herbert Sauro | 27 August 2020, 21:14:20 UTC | Updated readme | 27 August 2020, 21:14:20 UTC |
8dd06f4 | Herbert Sauro | 27 August 2020, 21:12:46 UTC | Updated version number again | 27 August 2020, 21:12:46 UTC |
b2d35eb | Herbert Sauro | 27 August 2020, 21:10:29 UTC | Updated version number | 27 August 2020, 21:10:29 UTC |
6bd73d7 | Herbert Sauro | 27 August 2020, 21:07:23 UTC | Merge branch 'master' of https://github.com/sys-bio/simplesbml | 27 August 2020, 21:07:23 UTC |
fd0c175 | Herbert Sauro | 27 August 2020, 21:06:56 UTC | Updated docs and added support for user functions | 27 August 2020, 21:06:56 UTC |
998cbff | Herbert Sauro | 27 August 2020, 03:11:44 UTC | Update README.md | 27 August 2020, 03:11:44 UTC |
a1944e7 | Herbert Sauro | 27 August 2020, 03:10:36 UTC | Update README.md | 27 August 2020, 03:10:36 UTC |
ee7f6c2 | Herbert Sauro | 27 August 2020, 03:10:00 UTC | Update README.md | 27 August 2020, 03:10:00 UTC |
4db11d4 | Herbert Sauro | 27 August 2020, 03:06:11 UTC | Updated docs | 27 August 2020, 03:06:11 UTC |
65b1b34 | Herbert Sauro | 27 August 2020, 02:58:24 UTC | Added rules and events | 27 August 2020, 02:58:24 UTC |
d945955 | Herbert Sauro | 27 August 2020, 01:29:04 UTC | Docs refreshed | 27 August 2020, 01:29:04 UTC |
6e4d787 | Herbert Sauro | 27 August 2020, 00:44:20 UTC | Updated docs | 27 August 2020, 00:44:20 UTC |
0b63f07 | Herbert Sauro | 26 August 2020, 22:00:14 UTC | Split __init__.py and a new file simplesbml.py | 26 August 2020, 22:00:14 UTC |
a8e91a5 | Herbert Sauro | 26 August 2020, 20:24:38 UTC | Test for changes to docs | 26 August 2020, 20:24:38 UTC |
d5aedfc | Herbert Sauro | 26 August 2020, 20:16:36 UTC | Removed redundant __init__.py from top level | 26 August 2020, 20:16:36 UTC |
cf95138 | Herbert Sauro | 26 August 2020, 19:55:30 UTC | Remove sphinx directory | 26 August 2020, 19:55:30 UTC |
e319252 | Herbert Sauro | 26 August 2020, 19:51:15 UTC | Rearranged folders to be more stnadard | 26 August 2020, 19:51:15 UTC |
8e07d9d | Herbert Sauro | 26 August 2020, 19:37:45 UTC | Move make.bats to docs | 26 August 2020, 19:37:45 UTC |
cadb463 | Herbert Sauro | 26 August 2020, 19:36:20 UTC | Create README.md | 26 August 2020, 19:36:20 UTC |
8b9220a | Herbert Sauro | 26 August 2020, 19:35:26 UTC | created docs folder | 26 August 2020, 19:35:26 UTC |
3e8db94 | Herbert Sauro | 26 August 2020, 00:56:37 UTC | Add files via upload Added some simple tests for the get methods. Requires Tellurium. | 26 August 2020, 00:56:37 UTC |
9f76f17 | Herbert Sauro | 26 August 2020, 00:55:23 UTC | Update __init__.py Added get series of methods | 26 August 2020, 00:55:23 UTC |
9900e6b | 0u812 | 20 September 2017, 20:35:11 UTC | remove conc units since they don't work; bump to 1.2.2 | 20 September 2017, 20:35:11 UTC |
715506a | 0u812 | 20 September 2017, 20:28:09 UTC | bump version to 1.2.1 | 20 September 2017, 20:28:09 UTC |
1224de1 | 0u812 | 20 September 2017, 20:15:43 UTC | modify setup.py | 20 September 2017, 20:15:43 UTC |
30d5621 | Kyle Medley | 20 September 2017, 20:06:33 UTC | Update README.md | 20 September 2017, 20:06:33 UTC |
1e66048 | Kyle Medley | 20 September 2017, 20:05:36 UTC | Update README.md | 20 September 2017, 20:05:36 UTC |
76479a5 | 0u812 | 20 September 2017, 20:04:29 UTC | update conf | 20 September 2017, 20:04:29 UTC |
b55f8e9 | 0u812 | 20 September 2017, 19:57:06 UTC | add requirements.txt | 20 September 2017, 19:57:06 UTC |
9e771cd | 0u812 | 20 September 2017, 19:53:08 UTC | add install deps | 20 September 2017, 19:53:08 UTC |
fe33e01 | 0u812 | 20 September 2017, 19:52:41 UTC | add version | 20 September 2017, 19:52:41 UTC |
52f5fdf | Kyle Medley | 20 September 2017, 19:50:07 UTC | Update README.md | 20 September 2017, 19:50:07 UTC |
13fa38e | 0u812 | 20 September 2017, 19:48:48 UTC | rename source->sphinx | 20 September 2017, 19:48:48 UTC |
e7c8b29 | 0u812 | 20 September 2017, 19:45:12 UTC | add author | 20 September 2017, 19:45:12 UTC |
1a330e9 | 0u812 | 20 September 2017, 19:44:53 UTC | fix setup.py | 20 September 2017, 19:44:53 UTC |
37d82a9 | 0u812 | 20 September 2017, 19:43:18 UTC | remove semicolons | 20 September 2017, 19:43:18 UTC |
509f28e | 0u812 | 20 September 2017, 19:41:52 UTC | fix prints and sbml import | 20 September 2017, 19:41:52 UTC |
eb32e9e | 0u812 | 20 September 2017, 19:33:08 UTC | fix whitespace | 20 September 2017, 19:33:08 UTC |
dab7bd4 | 0u812 | 20 September 2017, 19:27:09 UTC | add gitignore | 20 September 2017, 19:27:09 UTC |
7da1549 | 0u812 | 20 September 2017, 19:26:23 UTC | remove binary files | 20 September 2017, 19:26:23 UTC |
3628c9a | Kiri Choi | 19 February 2016, 18:09:02 UTC | Revert changes | 19 February 2016, 18:09:02 UTC |
8af069a | Kiri Choi | 19 February 2016, 07:48:05 UTC | Fix #23 | 19 February 2016, 07:48:05 UTC |
eecbc4a | Caroline Cannistra | 29 October 2015, 05:17:52 UTC | Changed default compartment volume and added model validation to toSBML() | 29 October 2015, 05:17:52 UTC |
b108a4a | Caroline Cannistra | 22 October 2015, 04:54:43 UTC | Fixed import bug for events | 22 October 2015, 04:54:43 UTC |
a5e5b9f | Caroline Cannistra | 19 October 2015, 21:40:04 UTC | Updates to version support, documentation | 19 October 2015, 21:40:04 UTC |
6bb94b7 | Caroline Cannistra | 06 October 2015, 04:14:04 UTC | Added example code and volume option for compartments | 06 October 2015, 04:14:04 UTC |
8398a3b | carolc24 | 20 September 2015, 07:04:08 UTC | Update README.md | 20 September 2015, 07:04:08 UTC |
072d527 | carolc24 | 20 September 2015, 07:03:05 UTC | Change to version 0.2 | 20 September 2015, 07:03:05 UTC |
d4e7f8f | carolc24 | 20 September 2015, 07:02:10 UTC | Added setLevelAndVersion() | 20 September 2015, 07:02:10 UTC |
b739a2a | carolc24 | 20 September 2015, 07:00:54 UTC | Added installation instructions and help | 20 September 2015, 07:00:54 UTC |
d927b06 | carolc24 | 20 September 2015, 05:58:03 UTC | Added setLevelAndVersion() | 20 September 2015, 05:58:03 UTC |
9279bb2 | carolc24 | 20 September 2015, 05:24:20 UTC | Several functionality updates including stoichiometry Made several changes, including: -adding stoichiometry support to reactions -sbmlModels can be set as older levels/versions -writeCode supports older levels/versions -other improvements to writeCode -support for concentration as units for species | 20 September 2015, 05:24:20 UTC |
0f65962 | Kyle Medley | 02 July 2015, 00:08:41 UTC | Merge pull request #12 from violasox/master Fix so that $ in reactants/products no longer causes incorrect output | 02 July 2015, 00:08:41 UTC |
90a69b3 | violasox | 01 July 2015, 23:53:06 UTC | Fix so that $ in reactants/products no longer causes incorrect output | 01 July 2015, 23:53:06 UTC |
4e0f6d6 | 0u812 | 22 June 2015, 19:05:22 UTC | set default stoichiometry for reactants and products, fix #11 | 22 June 2015, 19:05:22 UTC |
3aa2ac3 | Caroline Cannistra | 01 May 2015, 20:04:21 UTC | Edited documentation. | 01 May 2015, 20:04:21 UTC |
04e2d46 | Caroline Cannistra | 21 April 2015, 21:37:52 UTC | Deleted simplesbml/__init__.py | 21 April 2015, 21:37:52 UTC |
dcf5e62 | Kiri Choi | 20 April 2015, 12:28:54 UTC | Merge pull request #1 from kirichoi/master Fix the issue of tab completion showing all libsbml modules | 20 April 2015, 12:28:54 UTC |
50d3a73 | Kiri Choi | 20 April 2015, 12:13:20 UTC | Fixed import changes | 20 April 2015, 12:13:20 UTC |