Revision 0461d2e117ce88704a56dd8bcbf6bf7787991b15 authored by Eh Tan on 08 November 2007, 23:28 UTC, committed by Eh Tan on 08 November 2007, 23:28 UTC
svn+ssh://svn@geodynamics.org/cig/mc/3D/CitcomS/trunk

........
  r8194 | tan2 | 2007-10-30 14:49:58 -0700 (Tue, 30 Oct 2007) | 1 line
  
  Compute d(rho)/dr/rho from rho(r)
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  r8195 | tan2 | 2007-10-30 14:50:52 -0700 (Tue, 30 Oct 2007) | 1 line
  
  Fixed a bug in dimensionalizing density. Provided the formula of geoid calculation in the comments. Rearranged the order of functions.
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  r8196 | tan2 | 2007-10-30 14:53:50 -0700 (Tue, 30 Oct 2007) | 1 line
  
  A post-processing program to project geoid coefficents onto a regular (longitude, latitude) mesh
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  r8197 | tan2 | 2007-10-30 14:54:14 -0700 (Tue, 30 Oct 2007) | 1 line
  
  Added the C program project_geoid to the makefile
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  r8199 | tan2 | 2007-10-30 15:29:44 -0700 (Tue, 30 Oct 2007) | 1 line
  
  Minor modification
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  r8201 | tan2 | 2007-11-01 16:33:30 -0700 (Thu, 01 Nov 2007) | 1 line
  
  Print dv/v=dp/p=1.0 for the 1st Uzawa iteraion
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  r8202 | tan2 | 2007-11-01 16:33:50 -0700 (Thu, 01 Nov 2007) | 1 line
  
  Fixed an error in comment
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  r8204 | tan2 | 2007-11-05 17:03:35 -0800 (Mon, 05 Nov 2007) | 1 line
  
  Scaled topo with variable gravity. Fixed an error in comment. Rearranged computation.
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  r8205 | tan2 | 2007-11-05 17:03:55 -0800 (Mon, 05 Nov 2007) | 1 line
  
  Removed functions related sph. harm in lib/Regional_obsolete.c
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  r8206 | tan2 | 2007-11-05 17:04:20 -0800 (Mon, 05 Nov 2007) | 1 line
  
  Shrank the size of sph. harm arrays
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  r8207 | tan2 | 2007-11-05 17:04:43 -0800 (Mon, 05 Nov 2007) | 1 line
  
  Init'd some variables about vtk_io, which might be accessed with uninit'd values in output_finalize()
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  r8212 | tan2 | 2007-11-06 15:17:54 -0800 (Tue, 06 Nov 2007) | 1 line
  
  Fixed a few memory errors
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  r8213 | tan2 | 2007-11-06 15:18:12 -0800 (Tue, 06 Nov 2007) | 1 line
  
  Increase vlowstep to match the default value in pyre
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  r8214 | tan2 | 2007-11-06 15:18:35 -0800 (Tue, 06 Nov 2007) | 1 line
  
  Removed unused multigrid parameters
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  r8215 | tan2 | 2007-11-06 15:18:54 -0800 (Tue, 06 Nov 2007) | 1 line
  
  Added cgrad solver convergence parameters, increased buoyancy_ratio and lower the # of steps
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  r8226 | tan2 | 2007-11-07 11:51:56 -0800 (Wed, 07 Nov 2007) | 1 line
  
  Print a warning when matrix eqn solver not converging
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  r8227 | tan2 | 2007-11-07 11:52:17 -0800 (Wed, 07 Nov 2007) | 1 line
  
  Removed comp_el from default output, since it is not required for restart anymore.
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  r8228 | tan2 | 2007-11-07 11:52:39 -0800 (Wed, 07 Nov 2007) | 1 line
  
  Decreased the # of processors. This is the only way I can reproduce single-cell convection as in the manual.
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  r8235 | tan2 | 2007-11-08 11:18:26 -0800 (Thu, 08 Nov 2007) | 1 line
  
  Dereased the timestep size to reduce artifacts in advection
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  r8236 | tan2 | 2007-11-08 11:18:52 -0800 (Thu, 08 Nov 2007) | 1 line
  
  Update NEWS
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  r8237 | tan2 | 2007-11-08 11:19:12 -0800 (Thu, 08 Nov 2007) | 1 line
  
  Update the version number
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  r8241 | tan2 | 2007-11-08 13:17:14 -0800 (Thu, 08 Nov 2007) | 1 line
  
  Updated file ChangeLog to r8240
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  r8242 | tan2 | 2007-11-08 13:36:55 -0800 (Thu, 08 Nov 2007) | 1 line
  
  Removed binary checkpoint files from makefile, as the file size is too big for distribution.
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  r8243 | tan2 | 2007-11-08 13:38:09 -0800 (Thu, 08 Nov 2007) | 1 line
  
  Updated file ChangeLog to r8242
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  r8244 | tan2 | 2007-11-08 14:31:21 -0800 (Thu, 08 Nov 2007) | 1 line
  
  Replaced a system call by std C library remove() and disabled another system call (backup input file). Partially fixed issue130. All remaining system calls are in lib/Output_gzdir.c.
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  r8245 | tan2 | 2007-11-08 14:41:31 -0800 (Thu, 08 Nov 2007) | 1 line
  
  Updated file ChangeLog to r8244
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Raw File
SimpleApp.py
#!/usr/bin/env python
#
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
#
#<LicenseText>
#
# CitcomS.py by Eh Tan, Eun-seo Choi, and Pururav Thoutireddy.
# Copyright (C) 2002-2005, California Institute of Technology.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 2 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
#
#</LicenseText>
#
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
#


from BaseApplication import BaseApplication
import journal


class SimpleApp(BaseApplication):


    def __init__(self, name="CitcomS"):
        BaseApplication.__init__(self, name)

        self.solver = None
        self.solverCommunicator = None
        return



    def getNodes(self):
        '''Compute the required # of processors for MPI.
        '''
        s = self.inventory.solver.inventory.mesher.inventory
        nproc = s.nproc_surf * s.nprocx * s.nprocy * s.nprocz
        return nproc



    def initialize(self):
        '''Setup the problem.
        '''
        self.findLayout()

        self.controller.initialize(self)
        return



    def findLayout(self):
        '''Assign controller/solver/communicator to this process.
        '''
        self.controller = self.inventory.controller
        self.solver = self.inventory.solver
        import mpi
        self.solverCommunicator = mpi.world()
        return



    def reportConfiguration(self):

        import mpi
        rank = mpi.world().rank

        if rank != 0:
            return

        self._info.line("configuration:")
        self._info.line("  properties:")
        #self._info.line("    name: %r" % self.inventory.name)
        #self._info.line("    full name: %r" % self.inventory.fullname)

        self._info.line("  facilities:")
        self._info.line("    launcher: %r" % self.inventory.launcher.name)

        self._info.line("    solver: %r" % self.solver.name)
        self._info.log("    controller: %r" % self.controller.name)

        return


    class Inventory(BaseApplication.Inventory):

        import pyre.inventory

        import Controller
        import Solver

        controller = pyre.inventory.facility("controller", factory=Controller.controller)

        # solver can be either "regional" (component name for Solver.regionalSolver,
        # defined in ../etc/regional.odb) or "full" (component name for
        # Solver.fullSolver, defined in ../etc/full.odb)
        solver = pyre.inventory.facility("solver", factory=Solver.regionalSolver)




# version
__id__ = "$Id$"

# End of file
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