Revision 0461d2e117ce88704a56dd8bcbf6bf7787991b15 authored by Eh Tan on 08 November 2007, 23:28:46 UTC, committed by Eh Tan on 08 November 2007, 23:28:46 UTC
svn+ssh://svn@geodynamics.org/cig/mc/3D/CitcomS/trunk ........ r8194 | tan2 | 2007-10-30 14:49:58 -0700 (Tue, 30 Oct 2007) | 1 line Compute d(rho)/dr/rho from rho(r) ........ r8195 | tan2 | 2007-10-30 14:50:52 -0700 (Tue, 30 Oct 2007) | 1 line Fixed a bug in dimensionalizing density. Provided the formula of geoid calculation in the comments. Rearranged the order of functions. ........ r8196 | tan2 | 2007-10-30 14:53:50 -0700 (Tue, 30 Oct 2007) | 1 line A post-processing program to project geoid coefficents onto a regular (longitude, latitude) mesh ........ r8197 | tan2 | 2007-10-30 14:54:14 -0700 (Tue, 30 Oct 2007) | 1 line Added the C program project_geoid to the makefile ........ r8199 | tan2 | 2007-10-30 15:29:44 -0700 (Tue, 30 Oct 2007) | 1 line Minor modification ........ r8201 | tan2 | 2007-11-01 16:33:30 -0700 (Thu, 01 Nov 2007) | 1 line Print dv/v=dp/p=1.0 for the 1st Uzawa iteraion ........ r8202 | tan2 | 2007-11-01 16:33:50 -0700 (Thu, 01 Nov 2007) | 1 line Fixed an error in comment ........ r8204 | tan2 | 2007-11-05 17:03:35 -0800 (Mon, 05 Nov 2007) | 1 line Scaled topo with variable gravity. Fixed an error in comment. Rearranged computation. ........ r8205 | tan2 | 2007-11-05 17:03:55 -0800 (Mon, 05 Nov 2007) | 1 line Removed functions related sph. harm in lib/Regional_obsolete.c ........ r8206 | tan2 | 2007-11-05 17:04:20 -0800 (Mon, 05 Nov 2007) | 1 line Shrank the size of sph. harm arrays ........ r8207 | tan2 | 2007-11-05 17:04:43 -0800 (Mon, 05 Nov 2007) | 1 line Init'd some variables about vtk_io, which might be accessed with uninit'd values in output_finalize() ........ r8212 | tan2 | 2007-11-06 15:17:54 -0800 (Tue, 06 Nov 2007) | 1 line Fixed a few memory errors ........ r8213 | tan2 | 2007-11-06 15:18:12 -0800 (Tue, 06 Nov 2007) | 1 line Increase vlowstep to match the default value in pyre ........ r8214 | tan2 | 2007-11-06 15:18:35 -0800 (Tue, 06 Nov 2007) | 1 line Removed unused multigrid parameters ........ r8215 | tan2 | 2007-11-06 15:18:54 -0800 (Tue, 06 Nov 2007) | 1 line Added cgrad solver convergence parameters, increased buoyancy_ratio and lower the # of steps ........ r8226 | tan2 | 2007-11-07 11:51:56 -0800 (Wed, 07 Nov 2007) | 1 line Print a warning when matrix eqn solver not converging ........ r8227 | tan2 | 2007-11-07 11:52:17 -0800 (Wed, 07 Nov 2007) | 1 line Removed comp_el from default output, since it is not required for restart anymore. ........ r8228 | tan2 | 2007-11-07 11:52:39 -0800 (Wed, 07 Nov 2007) | 1 line Decreased the # of processors. This is the only way I can reproduce single-cell convection as in the manual. ........ r8235 | tan2 | 2007-11-08 11:18:26 -0800 (Thu, 08 Nov 2007) | 1 line Dereased the timestep size to reduce artifacts in advection ........ r8236 | tan2 | 2007-11-08 11:18:52 -0800 (Thu, 08 Nov 2007) | 1 line Update NEWS ........ r8237 | tan2 | 2007-11-08 11:19:12 -0800 (Thu, 08 Nov 2007) | 1 line Update the version number ........ r8241 | tan2 | 2007-11-08 13:17:14 -0800 (Thu, 08 Nov 2007) | 1 line Updated file ChangeLog to r8240 ........ r8242 | tan2 | 2007-11-08 13:36:55 -0800 (Thu, 08 Nov 2007) | 1 line Removed binary checkpoint files from makefile, as the file size is too big for distribution. ........ r8243 | tan2 | 2007-11-08 13:38:09 -0800 (Thu, 08 Nov 2007) | 1 line Updated file ChangeLog to r8242 ........ r8244 | tan2 | 2007-11-08 14:31:21 -0800 (Thu, 08 Nov 2007) | 1 line Replaced a system call by std C library remove() and disabled another system call (backup input file). Partially fixed issue130. All remaining system calls are in lib/Output_gzdir.c. ........ r8245 | tan2 | 2007-11-08 14:41:31 -0800 (Thu, 08 Nov 2007) | 1 line Updated file ChangeLog to r8244 ........
1 parent a828fa9
bindings.c
/*
//~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
//
//<LicenseText>
//
// CitcomS.py by Eh Tan, Eun-seo Choi, and Pururav Thoutireddy.
// Copyright (C) 2002-2005, California Institute of Technology.
//
// This program is free software; you can redistribute it and/or modify
// it under the terms of the GNU General Public License as published by
// the Free Software Foundation; either version 2 of the License, or
// (at your option) any later version.
//
// This program is distributed in the hope that it will be useful,
// but WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
// GNU General Public License for more details.
//
// You should have received a copy of the GNU General Public License
// along with this program; if not, write to the Free Software
// Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
//
//</LicenseText>
//
//~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
*/
#include <Python.h>
#include "bindings.h"
#include "advdiffu.h"
#include "initial_conditions.h"
#include "mesher.h"
#include "misc.h"
#include "outputs.h"
#include "setProperties.h"
#include "stokes_solver.h"
/* the method table */
struct PyMethodDef pyCitcom_methods[] = {
/* dummy entry for testing */
{pyCitcom_copyright__name__,
pyCitcom_copyright,
METH_VARARGS,
pyCitcom_copyright__doc__},
/*////////////////////////////////////////////////////////////////////////
// This section is for testing or temporatory implementation
////////////////////////////////////////////////////////////////////////*/
{pyCitcom_return1_test__name__,
pyCitcom_return1_test,
METH_VARARGS,
pyCitcom_return1_test__doc__},
{pyCitcom_CPU_time__name__,
pyCitcom_CPU_time,
METH_VARARGS,
pyCitcom_CPU_time__doc__},
{pyCitcom_read_instructions__name__,
pyCitcom_read_instructions,
METH_VARARGS,
pyCitcom_read_instructions__doc__},
/*////////////////////////////////////////////////////////////////////////
// This section is for finished implementation
////////////////////////////////////////////////////////////////////////*/
/* from misc.h */
{pyCitcom_citcom_init__name__,
pyCitcom_citcom_init,
METH_VARARGS,
pyCitcom_citcom_init__doc__},
{pyCitcom_full_solver_init__name__,
pyCitcom_full_solver_init,
METH_VARARGS,
pyCitcom_full_solver_init__doc__},
{pyCitcom_regional_solver_init__name__,
pyCitcom_regional_solver_init,
METH_VARARGS,
pyCitcom_regional_solver_init__doc__},
{pyCitcom_global_default_values__name__,
pyCitcom_global_default_values,
METH_VARARGS,
pyCitcom_global_default_values__doc__},
{pyCitcom_set_signal__name__,
pyCitcom_set_signal,
METH_VARARGS,
pyCitcom_set_signal__doc__},
{pyCitcom_velocities_conform_bcs__name__,
pyCitcom_velocities_conform_bcs,
METH_VARARGS,
pyCitcom_velocities_conform_bcs__doc__},
{pyCitcom_BC_update_plate_velocity__name__,
pyCitcom_BC_update_plate_velocity,
METH_VARARGS,
pyCitcom_BC_update_plate_velocity__doc__},
{pyCitcom_Tracer_tracer_advection__name__,
pyCitcom_Tracer_tracer_advection,
METH_VARARGS,
pyCitcom_Tracer_tracer_advection__doc__},
{pyCitcom_Visc_update_material__name__,
pyCitcom_Visc_update_material,
METH_VARARGS,
pyCitcom_Visc_update_material__doc__},
{pyCitcom_return_dt__name__,
pyCitcom_return_dt,
METH_VARARGS,
pyCitcom_return_dt__doc__},
{pyCitcom_return_step__name__,
pyCitcom_return_step,
METH_VARARGS,
pyCitcom_return_step__doc__},
{pyCitcom_return_t__name__,
pyCitcom_return_t,
METH_VARARGS,
pyCitcom_return_t__doc__},
{pyCitcom_return_rank__name__,
pyCitcom_return_rank,
METH_VARARGS,
pyCitcom_return_rank__doc__},
{pyCitcom_return_pid__name__,
pyCitcom_return_pid,
METH_VARARGS,
pyCitcom_return_pid__doc__},
/* from advdiffu.h */
{pyCitcom_PG_timestep_init__name__,
pyCitcom_PG_timestep_init,
METH_VARARGS,
pyCitcom_PG_timestep_init__doc__},
{pyCitcom_PG_timestep_solve__name__,
pyCitcom_PG_timestep_solve,
METH_VARARGS,
pyCitcom_PG_timestep_solve__doc__},
{pyCitcom_set_convection_defaults__name__,
pyCitcom_set_convection_defaults,
METH_VARARGS,
pyCitcom_set_convection_defaults__doc__},
{pyCitcom_stable_timestep__name__,
pyCitcom_stable_timestep,
METH_VARARGS,
pyCitcom_stable_timestep__doc__},
/* from initial_conditions.h */
{pyCitcom_ic_initialize_material__name__,
pyCitcom_ic_initialize_material,
METH_VARARGS,
pyCitcom_ic_initialize_material__doc__},
{pyCitcom_ic_init_tracer_composition__name__,
pyCitcom_ic_init_tracer_composition,
METH_VARARGS,
pyCitcom_ic_init_tracer_composition__doc__},
{pyCitcom_ic_constructTemperature__name__,
pyCitcom_ic_constructTemperature,
METH_VARARGS,
pyCitcom_ic_constructTemperature__doc__},
{pyCitcom_ic_initPressure__name__,
pyCitcom_ic_initPressure,
METH_VARARGS,
pyCitcom_ic_initPressure__doc__},
{pyCitcom_ic_initVelocity__name__,
pyCitcom_ic_initVelocity,
METH_VARARGS,
pyCitcom_ic_initVelocity__doc__},
{pyCitcom_ic_initViscosity__name__,
pyCitcom_ic_initViscosity,
METH_VARARGS,
pyCitcom_ic_initViscosity__doc__},
{pyCitcom_ic_readCheckpoint__name__,
pyCitcom_ic_readCheckpoint,
METH_VARARGS,
pyCitcom_ic_readCheckpoint__doc__},
/* from mesher.h */
{pyCitcom_full_sphere_launch__name__,
pyCitcom_full_sphere_launch,
METH_VARARGS,
pyCitcom_full_sphere_launch__doc__},
{pyCitcom_regional_sphere_launch__name__,
pyCitcom_regional_sphere_launch,
METH_VARARGS,
pyCitcom_regional_sphere_launch__doc__},
/* from outputs.h */
{pyCitcom_output__name__,
pyCitcom_output,
METH_VARARGS,
pyCitcom_output__doc__},
{pyCitcom_output_finalize__name__,
pyCitcom_output_finalize,
METH_VARARGS,
pyCitcom_output_finalize__doc__},
{pyCitcom_output_time__name__,
pyCitcom_output_time,
METH_VARARGS,
pyCitcom_output_time__doc__},
{pyCitcom_output_checkpoint__name__,
pyCitcom_output_checkpoint,
METH_VARARGS,
pyCitcom_output_checkpoint__doc__},
/* from setProperties.h */
{pyCitcom_Advection_diffusion_set_properties__name__,
pyCitcom_Advection_diffusion_set_properties,
METH_VARARGS,
pyCitcom_Advection_diffusion_set_properties__doc__},
{pyCitcom_BC_set_properties__name__,
pyCitcom_BC_set_properties,
METH_VARARGS,
pyCitcom_BC_set_properties__doc__},
{pyCitcom_Const_set_properties__name__,
pyCitcom_Const_set_properties,
METH_VARARGS,
pyCitcom_Const_set_properties__doc__},
{pyCitcom_IC_set_properties__name__,
pyCitcom_IC_set_properties,
METH_VARARGS,
pyCitcom_IC_set_properties__doc__},
{pyCitcom_Output_set_properties__name__,
pyCitcom_Output_set_properties,
METH_VARARGS,
pyCitcom_Output_set_properties__doc__},
{pyCitcom_Param_set_properties__name__,
pyCitcom_Param_set_properties,
METH_VARARGS,
pyCitcom_Param_set_properties__doc__},
{pyCitcom_Phase_set_properties__name__,
pyCitcom_Phase_set_properties,
METH_VARARGS,
pyCitcom_Phase_set_properties__doc__},
{pyCitcom_Solver_set_properties__name__,
pyCitcom_Solver_set_properties,
METH_VARARGS,
pyCitcom_Solver_set_properties__doc__},
{pyCitcom_Sphere_set_properties__name__,
pyCitcom_Sphere_set_properties,
METH_VARARGS,
pyCitcom_Sphere_set_properties__doc__},
{pyCitcom_Tracer_set_properties__name__,
pyCitcom_Tracer_set_properties,
METH_VARARGS,
pyCitcom_Tracer_set_properties__doc__},
{pyCitcom_Visc_set_properties__name__,
pyCitcom_Visc_set_properties,
METH_VARARGS,
pyCitcom_Visc_set_properties__doc__},
{pyCitcom_Incompressible_set_properties__name__,
pyCitcom_Incompressible_set_properties,
METH_VARARGS,
pyCitcom_Incompressible_set_properties__doc__},
/* from stokes_solver.h */
{pyCitcom_assemble_forces__name__,
pyCitcom_assemble_forces,
METH_VARARGS,
pyCitcom_assemble_forces__doc__},
{pyCitcom_assemble_forces_pseudo_surf__name__,
pyCitcom_assemble_forces_pseudo_surf,
METH_VARARGS,
pyCitcom_assemble_forces_pseudo_surf__doc__},
{pyCitcom_construct_stiffness_B_matrix__name__,
pyCitcom_construct_stiffness_B_matrix,
METH_VARARGS,
pyCitcom_construct_stiffness_B_matrix__doc__},
{pyCitcom_general_stokes_solver__name__,
pyCitcom_general_stokes_solver,
METH_VARARGS,
pyCitcom_general_stokes_solver__doc__},
{pyCitcom_general_stokes_solver_setup__name__,
pyCitcom_general_stokes_solver_setup,
METH_VARARGS,
pyCitcom_general_stokes_solver_setup__doc__},
{pyCitcom_get_system_viscosity__name__,
pyCitcom_get_system_viscosity,
METH_VARARGS,
pyCitcom_get_system_viscosity__doc__},
{pyCitcom_set_cg_defaults__name__,
pyCitcom_set_cg_defaults,
METH_VARARGS,
pyCitcom_set_cg_defaults__doc__},
{pyCitcom_set_mg_defaults__name__,
pyCitcom_set_mg_defaults,
METH_VARARGS,
pyCitcom_set_mg_defaults__doc__},
{pyCitcom_set_mg_el_defaults__name__,
pyCitcom_set_mg_el_defaults,
METH_VARARGS,
pyCitcom_set_mg_el_defaults__doc__},
{pyCitcom_solve_constrained_flow_iterative__name__,
pyCitcom_solve_constrained_flow_iterative,
METH_VARARGS,
pyCitcom_solve_constrained_flow_iterative__doc__},
{pyCitcom_solve_constrained_flow_iterative_pseudo_surf__name__,
pyCitcom_solve_constrained_flow_iterative_pseudo_surf,
METH_VARARGS,
pyCitcom_solve_constrained_flow_iterative_pseudo_surf__doc__},
/* Sentinel */
{0, 0, 0, 0}
};
/* $Id$ */
/* End of file */
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