Revision 0461d2e117ce88704a56dd8bcbf6bf7787991b15 authored by Eh Tan on 08 November 2007, 23:28:46 UTC, committed by Eh Tan on 08 November 2007, 23:28:46 UTC
svn+ssh://svn@geodynamics.org/cig/mc/3D/CitcomS/trunk

........
  r8194 | tan2 | 2007-10-30 14:49:58 -0700 (Tue, 30 Oct 2007) | 1 line
  
  Compute d(rho)/dr/rho from rho(r)
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  r8195 | tan2 | 2007-10-30 14:50:52 -0700 (Tue, 30 Oct 2007) | 1 line
  
  Fixed a bug in dimensionalizing density. Provided the formula of geoid calculation in the comments. Rearranged the order of functions.
........
  r8196 | tan2 | 2007-10-30 14:53:50 -0700 (Tue, 30 Oct 2007) | 1 line
  
  A post-processing program to project geoid coefficents onto a regular (longitude, latitude) mesh
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  r8197 | tan2 | 2007-10-30 14:54:14 -0700 (Tue, 30 Oct 2007) | 1 line
  
  Added the C program project_geoid to the makefile
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  r8199 | tan2 | 2007-10-30 15:29:44 -0700 (Tue, 30 Oct 2007) | 1 line
  
  Minor modification
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  r8201 | tan2 | 2007-11-01 16:33:30 -0700 (Thu, 01 Nov 2007) | 1 line
  
  Print dv/v=dp/p=1.0 for the 1st Uzawa iteraion
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  r8202 | tan2 | 2007-11-01 16:33:50 -0700 (Thu, 01 Nov 2007) | 1 line
  
  Fixed an error in comment
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  r8204 | tan2 | 2007-11-05 17:03:35 -0800 (Mon, 05 Nov 2007) | 1 line
  
  Scaled topo with variable gravity. Fixed an error in comment. Rearranged computation.
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  r8205 | tan2 | 2007-11-05 17:03:55 -0800 (Mon, 05 Nov 2007) | 1 line
  
  Removed functions related sph. harm in lib/Regional_obsolete.c
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  r8206 | tan2 | 2007-11-05 17:04:20 -0800 (Mon, 05 Nov 2007) | 1 line
  
  Shrank the size of sph. harm arrays
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  r8207 | tan2 | 2007-11-05 17:04:43 -0800 (Mon, 05 Nov 2007) | 1 line
  
  Init'd some variables about vtk_io, which might be accessed with uninit'd values in output_finalize()
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  r8212 | tan2 | 2007-11-06 15:17:54 -0800 (Tue, 06 Nov 2007) | 1 line
  
  Fixed a few memory errors
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  r8213 | tan2 | 2007-11-06 15:18:12 -0800 (Tue, 06 Nov 2007) | 1 line
  
  Increase vlowstep to match the default value in pyre
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  r8214 | tan2 | 2007-11-06 15:18:35 -0800 (Tue, 06 Nov 2007) | 1 line
  
  Removed unused multigrid parameters
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  r8215 | tan2 | 2007-11-06 15:18:54 -0800 (Tue, 06 Nov 2007) | 1 line
  
  Added cgrad solver convergence parameters, increased buoyancy_ratio and lower the # of steps
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  r8226 | tan2 | 2007-11-07 11:51:56 -0800 (Wed, 07 Nov 2007) | 1 line
  
  Print a warning when matrix eqn solver not converging
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  r8227 | tan2 | 2007-11-07 11:52:17 -0800 (Wed, 07 Nov 2007) | 1 line
  
  Removed comp_el from default output, since it is not required for restart anymore.
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  r8228 | tan2 | 2007-11-07 11:52:39 -0800 (Wed, 07 Nov 2007) | 1 line
  
  Decreased the # of processors. This is the only way I can reproduce single-cell convection as in the manual.
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  r8235 | tan2 | 2007-11-08 11:18:26 -0800 (Thu, 08 Nov 2007) | 1 line
  
  Dereased the timestep size to reduce artifacts in advection
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  r8236 | tan2 | 2007-11-08 11:18:52 -0800 (Thu, 08 Nov 2007) | 1 line
  
  Update NEWS
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  r8237 | tan2 | 2007-11-08 11:19:12 -0800 (Thu, 08 Nov 2007) | 1 line
  
  Update the version number
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  r8241 | tan2 | 2007-11-08 13:17:14 -0800 (Thu, 08 Nov 2007) | 1 line
  
  Updated file ChangeLog to r8240
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  r8242 | tan2 | 2007-11-08 13:36:55 -0800 (Thu, 08 Nov 2007) | 1 line
  
  Removed binary checkpoint files from makefile, as the file size is too big for distribution.
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  r8243 | tan2 | 2007-11-08 13:38:09 -0800 (Thu, 08 Nov 2007) | 1 line
  
  Updated file ChangeLog to r8242
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  r8244 | tan2 | 2007-11-08 14:31:21 -0800 (Thu, 08 Nov 2007) | 1 line
  
  Replaced a system call by std C library remove() and disabled another system call (backup input file). Partially fixed issue130. All remaining system calls are in lib/Output_gzdir.c.
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  r8245 | tan2 | 2007-11-08 14:41:31 -0800 (Thu, 08 Nov 2007) | 1 line
  
  Updated file ChangeLog to r8244
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Raw File
exchange.py
#!/usr/bin/env python
#
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
#
#<LicenseText>
#
# CitcomS.py by Eh Tan, Eun-seo Choi, and Pururav Thoutireddy.
# Copyright (C) 2002-2005, California Institute of Technology.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 2 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
#
#</LicenseText>
#
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
#

from mpi.Application import Application
import journal


class TestExchanger(Application):

    def __init__(self, name="citcom"):
        Application.__init__(self, name)
        self.exchanger = None
        return


    def run(self):
        layout = self.inventory.layout
        layout.initialize(self)

        self.findLayout(layout)

        exchanger = self.exchanger
        if exchanger:
            self.test(exchanger)

        return


    def test(self, exchanger):
        # testing exchanger creation
        exchanger.selectModule()
        exchanger.createExchanger(self)
        #print exchanger.name, exchanger.exchanger

        # testing boundary creation and exchange
        exchanger.findBoundary()
        print exchanger.name, ": boundary found"

        # testing applyBoundaryConditions
        exchanger.applyBoundaryConditions()
        print exchanger.name, ": applyBoundaryConditions worked"

        # testing initTemperature
        #exchanger.initTemperature()
        #print exchanger.name, ": temperature transferred"

        # select dt
        try:
            # success if exchanger is a FGE
            exchanger.fge_t
            dt = 0.4
        except:
            # exception if exchanger is a CGE
            dt = 1

        # testing dt exchanging
        print "%s - old dt = %g   exchanged dt = %g   old dt = %g" % (
              exchanger.name, dt,
              exchanger.module.exchangeTimestep(exchanger.exchanger, dt),
              dt)

        # testing exchangeSignal
        steps = 2*3 + 1
        for step in range(steps):
            time = exchanger.stableTimestep(dt)
            print "%s - step %d: %g" % (exchanger.name, step, time)
            exchanger.applyBoundaryConditions()

            if step == steps-1:
                done = True
            else:
                done = False

            done = exchanger.endTimestep(done)

            if done:
                break

        return


    def findLayout(self, layout):
        import ExchangerLib
        if layout.coarse:
            self.exchanger = self.inventory.coarse
            self.communicator = layout.coarse
            self.all_variables = ExchangerLib.CoarsereturnE()
        elif layout.fine:
            self.exchanger = self.inventory.fine
            self.communicator = layout.fine
            self.all_variables = ExchangerLib.FinereturnE()
        else:
            import journal
            journal.warning(self.name).log("node '%d' is an orphan" % layout.rank)
        self.intercomm = layout.intercomm
        self.rank = layout.rank
        self.nodes = layout.nodes
        self.leader = layout.leader
        self.remoteLeader = layout.remoteLeader

        print "%s exchanger: rank=%d  leader=%d  remoteLeader=%d" % (
              self.exchanger.name, self.rank, self.leader, self.remoteLeader)

        return




    class Inventory(Application.Inventory):

        import pyre.inventory

        import CitcomS.Components.Exchanger as Exchanger
        import CitcomS.Controller as Controller
        import CitcomS.Layout as Layout


        controller = pyre.inventory.facility("controller", default=Controller.controller())
        layout = pyre.inventory.facility("layout", default=Layout.layout())

        coarse = pyre.inventory.facility("coarse", default=Exchanger.coarsegridexchanger("coarse"))
        fine = pyre.inventory.facility("fine", default=Exchanger.finegridexchanger("fine"))




# main

if __name__ == "__main__":

    import mpi

    # testing Exchangermodule.so
    import ExchangerLib
    if not mpi.world().rank:
        print ExchangerLib.copyright()
        print dir(ExchangerLib)

    import journal
    #journal.debug("Array2D").activate()
    journal.debug("Exchanger").activate()
    journal.info("  X").activate()
    journal.info("  proc").activate()
    journal.info("  bid").activate()

    app = TestExchanger("test")
    app.main()



# version
__id__ = "$Id$"

# End of file
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