Revision 0461d2e117ce88704a56dd8bcbf6bf7787991b15 authored by Eh Tan on 08 November 2007, 23:28:46 UTC, committed by Eh Tan on 08 November 2007, 23:28:46 UTC
svn+ssh://svn@geodynamics.org/cig/mc/3D/CitcomS/trunk ........ r8194 | tan2 | 2007-10-30 14:49:58 -0700 (Tue, 30 Oct 2007) | 1 line Compute d(rho)/dr/rho from rho(r) ........ r8195 | tan2 | 2007-10-30 14:50:52 -0700 (Tue, 30 Oct 2007) | 1 line Fixed a bug in dimensionalizing density. Provided the formula of geoid calculation in the comments. Rearranged the order of functions. ........ r8196 | tan2 | 2007-10-30 14:53:50 -0700 (Tue, 30 Oct 2007) | 1 line A post-processing program to project geoid coefficents onto a regular (longitude, latitude) mesh ........ r8197 | tan2 | 2007-10-30 14:54:14 -0700 (Tue, 30 Oct 2007) | 1 line Added the C program project_geoid to the makefile ........ r8199 | tan2 | 2007-10-30 15:29:44 -0700 (Tue, 30 Oct 2007) | 1 line Minor modification ........ r8201 | tan2 | 2007-11-01 16:33:30 -0700 (Thu, 01 Nov 2007) | 1 line Print dv/v=dp/p=1.0 for the 1st Uzawa iteraion ........ r8202 | tan2 | 2007-11-01 16:33:50 -0700 (Thu, 01 Nov 2007) | 1 line Fixed an error in comment ........ r8204 | tan2 | 2007-11-05 17:03:35 -0800 (Mon, 05 Nov 2007) | 1 line Scaled topo with variable gravity. Fixed an error in comment. Rearranged computation. ........ r8205 | tan2 | 2007-11-05 17:03:55 -0800 (Mon, 05 Nov 2007) | 1 line Removed functions related sph. harm in lib/Regional_obsolete.c ........ r8206 | tan2 | 2007-11-05 17:04:20 -0800 (Mon, 05 Nov 2007) | 1 line Shrank the size of sph. harm arrays ........ r8207 | tan2 | 2007-11-05 17:04:43 -0800 (Mon, 05 Nov 2007) | 1 line Init'd some variables about vtk_io, which might be accessed with uninit'd values in output_finalize() ........ r8212 | tan2 | 2007-11-06 15:17:54 -0800 (Tue, 06 Nov 2007) | 1 line Fixed a few memory errors ........ r8213 | tan2 | 2007-11-06 15:18:12 -0800 (Tue, 06 Nov 2007) | 1 line Increase vlowstep to match the default value in pyre ........ r8214 | tan2 | 2007-11-06 15:18:35 -0800 (Tue, 06 Nov 2007) | 1 line Removed unused multigrid parameters ........ r8215 | tan2 | 2007-11-06 15:18:54 -0800 (Tue, 06 Nov 2007) | 1 line Added cgrad solver convergence parameters, increased buoyancy_ratio and lower the # of steps ........ r8226 | tan2 | 2007-11-07 11:51:56 -0800 (Wed, 07 Nov 2007) | 1 line Print a warning when matrix eqn solver not converging ........ r8227 | tan2 | 2007-11-07 11:52:17 -0800 (Wed, 07 Nov 2007) | 1 line Removed comp_el from default output, since it is not required for restart anymore. ........ r8228 | tan2 | 2007-11-07 11:52:39 -0800 (Wed, 07 Nov 2007) | 1 line Decreased the # of processors. This is the only way I can reproduce single-cell convection as in the manual. ........ r8235 | tan2 | 2007-11-08 11:18:26 -0800 (Thu, 08 Nov 2007) | 1 line Dereased the timestep size to reduce artifacts in advection ........ r8236 | tan2 | 2007-11-08 11:18:52 -0800 (Thu, 08 Nov 2007) | 1 line Update NEWS ........ r8237 | tan2 | 2007-11-08 11:19:12 -0800 (Thu, 08 Nov 2007) | 1 line Update the version number ........ r8241 | tan2 | 2007-11-08 13:17:14 -0800 (Thu, 08 Nov 2007) | 1 line Updated file ChangeLog to r8240 ........ r8242 | tan2 | 2007-11-08 13:36:55 -0800 (Thu, 08 Nov 2007) | 1 line Removed binary checkpoint files from makefile, as the file size is too big for distribution. ........ r8243 | tan2 | 2007-11-08 13:38:09 -0800 (Thu, 08 Nov 2007) | 1 line Updated file ChangeLog to r8242 ........ r8244 | tan2 | 2007-11-08 14:31:21 -0800 (Thu, 08 Nov 2007) | 1 line Replaced a system call by std C library remove() and disabled another system call (backup input file). Partially fixed issue130. All remaining system calls are in lib/Output_gzdir.c. ........ r8245 | tan2 | 2007-11-08 14:41:31 -0800 (Thu, 08 Nov 2007) | 1 line Updated file ChangeLog to r8244 ........
1 parent a828fa9
mayavi2_citcoms_display.py
#! /usr/bin/env python
try:
import wxversion
wxversion.ensureMinimal('2.6')
except ImportError:
pass
from enthought.mayavi.app import Mayavi
import sys
from os.path import isfile
from getopt import getopt, GetoptError
class HdfDisplay(Mayavi):
filename = None
timestep = 0
nx_redu = 0
ny_redu = 0
nz_redu = 0
def run(self):
from enthought.mayavi.sources.vtk_file_reader import VTKFileReader
#import modules here
from enthought.mayavi.modules import surface, glyph , axes, outline, orientation_axes, scalar_cut_plane
from enthought.mayavi.sources.vtk_data_source import VTKDataSource
from enthought.tvtk.api import tvtk
#CitcomS Filter and Modules
from citcoms_plugins.plugins.CitcomSHDFUgrid import CitcomSHDFUgrid
from citcoms_plugins.plugins.filter.CitcomsCapFilter import CitcomsCapFilter
import re
script = self.script
#DEFINES
orange = (1.0,0.5,0)
reduce_factor = 2
#Read Hdf file
src_hdf = CitcomSHDFUgrid()
hexgrid = src_hdf.initialize(self.filename, self.timestep, self.nx_redu, self.ny_redu, self.nz_redu)
radius_inner = src_hdf._radius_inner
data = VTKDataSource()
data.data = hexgrid
###########Display Data############
#Create new scene
script.new_scene()
script.add_source(data)
scap = CitcomsCapFilter()
script.add_filter(scap)
#Show ScalarCutPlane
scp = scalar_cut_plane.ScalarCutPlane()
script.add_module(scp)
# Display glyphs on vector field
gly = glyph.Glyph()
gly.glyph.glyph_source.scale = 0.082
gly.glyph.scale_mode = 'scale_by_scalar'
gly.glyph.color_mode = 'color_by_scalar'
script.add_module(gly)
mm = gly.module_manager
#mm.scalar_lut_manager.use_default_range = False
#mm.scalar_lut_manager.data_range = 0.0, 1.0
################### Create CORE ################################
#Load VTK Data Sets
sphere = tvtk.SphereSource()
sphere.radius = radius_inner
sphere.theta_resolution = 24
sphere.phi_resolution = 24
# Create a mesh from the data created above.
src = VTKDataSource()
src.data = sphere.output
script.add_source(src)
#Show Surface
surf_module = surface.Surface()
surf_module.actor.property.color = orange
script.add_module(surf_module)
# to create the rendering scene
## your stuff here
if __name__ == '__main__':
mc = HdfDisplay()
if len(sys.argv) > 1:
mc.filename = sys.argv[1]
if not isfile(mc.filename):
print "File not found."
sys.exit(1)
else:
print "Usage: %s [filename] -x [Reduced Grid Size X] -y [Reduced Grid Size X] -z [Reduced Grid Size Z]" % sys.argv[0]
sys.exit(0)
##parse for reduction factors
try:
opts, args = getopt(sys.argv[3:], "x:y:z:", ['x=','y=','z='])
except GetoptError, msg:
print "Error: %s" % msg
sys.exit(1)
for opt,arg in opts:
if opt in ('-x','--nx_redu'):
try:
mc.nx_redu = int(arg)
print "Reducing Grid Size to x:",mc.nx_redu
except ValueError:
print "x is not a number..."
sys.exit(1)
if opt in ('-y','--ny_redu'):
try:
mc.ny_redu = int(arg)
print "Reducing Grid Size to y:",mc.ny_redu
except ValueError:
print "y is not a number..."
sys.exit(1)
if opt in ('-z','--nz_redu'):
try:
mc.nz_redu = int(arg)
print "Reducing Grid Size to z:",mc.nz_redu
except ValueError:
print "z is not a number..."
sys.exit(1)
mc.main()
Computing file changes ...