Revision 0a1cb313642a4fe6bdd72fd6031fca8cc0b43d6c authored by Orfeas Kourkakis on 23 November 2022, 13:48:43 UTC, committed by GitHub on 23 November 2022, 13:48:43 UTC
* [bugfix] Fix value passing bug in New Experiment form Add missing logic in New Experiment form in order to pass the value of the editor content in Metrics Collector tab, when Kind is set to Custom. * Adjust unit tests for custom yaml metrics collector
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README.md
<h1 align="center">
<img src="./docs/images/logo-title.png" alt="logo" width="200">
<br>
</h1>
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Katib is a Kubernetes-native project for automated machine learning (AutoML).
Katib supports
[Hyperparameter Tuning](https://en.wikipedia.org/wiki/Hyperparameter_optimization),
[Early Stopping](https://en.wikipedia.org/wiki/Early_stopping) and
[Neural Architecture Search](https://en.wikipedia.org/wiki/Neural_architecture_search).
Katib is the project which is agnostic to machine learning (ML) frameworks.
It can tune hyperparameters of applications written in any language of the
users’ choice and natively supports many ML frameworks, such as
[TensorFlow](https://www.tensorflow.org/), [Apache MXNet](https://mxnet.apache.org/),
[PyTorch](https://pytorch.org/), [XGBoost](https://xgboost.readthedocs.io/en/latest/), and others.
Katib can perform training jobs using any Kubernetes
[Custom Resources](https://www.kubeflow.org/docs/components/katib/trial-template/)
with out of the box support for [Kubeflow Training Operator](https://github.com/kubeflow/training-operator),
[Argo Workflows](https://github.com/argoproj/argo-workflows), [Tekton Pipelines](https://github.com/tektoncd/pipeline)
and many more.
Katib stands for `secretary` in Arabic.
# Search Algorithms
Katib supports several search algorithms. Follow the
[Kubeflow documentation](https://www.kubeflow.org/docs/components/katib/experiment/#search-algorithms-in-detail)
to know more about each algorithm and check the
[Suggestion service guide](/docs/new-algorithm-service.md) to implement your
custom algorithm.
<table>
<tbody>
<tr align="center">
<td>
<b>Hyperparameter Tuning</b>
</td>
<td>
<b>Neural Architecture Search</b>
</td>
<td>
<b>Early Stopping</b>
</td>
</tr>
<tr align="center">
<td>
<a href="https://www.kubeflow.org/docs/components/katib/experiment/#random-search">Random Search</a>
</td>
<td>
<a href="https://www.kubeflow.org/docs/components/katib/experiment/#neural-architecture-search-based-on-enas">ENAS</a>
</td>
<td>
<a href="https://www.kubeflow.org/docs/components/katib/early-stopping/#median-stopping-rule">Median Stop</a>
</td>
</tr>
<tr align="center">
<td>
<a href="https://www.kubeflow.org/docs/components/katib/experiment/#grid-search">Grid Search</a>
</td>
<td>
<a href="https://www.kubeflow.org/docs/components/katib/experiment/#differentiable-architecture-search-darts">DARTS</a>
</td>
<td>
</td>
</tr>
<tr align="center">
<td>
<a href="https://www.kubeflow.org/docs/components/katib/experiment/#bayesian-optimization">Bayesian Optimization</a>
</td>
<td>
</td>
<td>
</td>
</tr>
<tr align="center">
<td>
<a href="https://www.kubeflow.org/docs/components/katib/experiment/#tree-of-parzen-estimators-tpe">TPE</a>
</td>
<td>
</td>
<td>
</td>
</tr>
<tr align="center">
<td>
<a href="https://www.kubeflow.org/docs/components/katib/experiment/#multivariate-tpe">Multivariate TPE</a>
</td>
<td>
</td>
<td>
</td>
</tr>
<tr align="center">
<td>
<a href="https://www.kubeflow.org/docs/components/katib/experiment/#covariance-matrix-adaptation-evolution-strategy-cma-es">CMA-ES</a>
</td>
<td>
</td>
<td>
</td>
</tr>
<tr align="center">
<td>
<a href="https://www.kubeflow.org/docs/components/katib/experiment/#sobols-quasirandom-sequence">Sobol's Quasirandom Sequence</a>
</td>
<td>
</td>
<td>
</td>
</tr>
<tr align="center">
<td>
<a href="https://www.kubeflow.org/docs/components/katib/experiment/#hyperband">HyperBand</a>
</td>
<td>
</td>
<td>
</td>
</tr>
<tr align="center">
<td>
<a href="https://www.kubeflow.org/docs/components/katib/experiment/#pbt">Population Based Training</a>
</td>
<td>
</td>
<td>
</td>
</tr>
</tbody>
</table>
To perform above algorithms Katib supports the following frameworks:
- [Chocolate](https://github.com/AIworx-Labs/chocolate)
- [Goptuna](https://github.com/c-bata/goptuna)
- [Hyperopt](https://github.com/hyperopt/hyperopt)
- [Optuna](https://github.com/optuna/optuna)
- [Scikit Optimize](https://github.com/scikit-optimize/scikit-optimize)
# Installation
For the various Katib installs check the
[Kubeflow guide](https://www.kubeflow.org/docs/components/katib/hyperparameter/#katib-setup).
Follow the next steps to install Katib standalone.
## Prerequisites
This is the minimal requirements to install Katib:
- Kubernetes >= 1.23
- `kubectl` >= 1.23
## Latest Version
For the latest Katib version run this command:
```
kubectl apply -k "github.com/kubeflow/katib.git/manifests/v1beta1/installs/katib-standalone?ref=master"
```
## Release Version
For the specific Katib release (for example `v0.14.0`) run this command:
```
kubectl apply -k "github.com/kubeflow/katib.git/manifests/v1beta1/installs/katib-standalone?ref=v0.14.0"
```
Make sure that all Katib components are running:
```
$ kubectl get pods -n kubeflow
NAME READY STATUS RESTARTS AGE
katib-cert-generator-rw95w 0/1 Completed 0 35s
katib-controller-566595bdd8-hbxgf 1/1 Running 0 36s
katib-db-manager-57cd769cdb-4g99m 1/1 Running 0 36s
katib-mysql-7894994f88-5d4s5 1/1 Running 0 36s
katib-ui-5767cfccdc-pwg2x 1/1 Running 0 36s
```
For the Katib Experiments check the [complete examples list](./examples/v1beta1).
# Quickstart
You can run your first HyperParameter Tuning Experiment using [Katib Python SDK](./sdk/python/v1beta1).
In the following example we are going to maximize a simple objective function:
$F(a,b) = 4a - b^2$. The bigger $a$ and the lesser $b$ value, the bigger the function value $F$.
```python
import kubeflow.katib as katib
# Step 1. Create an objective function.
def objective(parameters):
# Import required packages.
import time
time.sleep(5)
# Calculate objective function.
result = 4 * int(parameters["a"]) - float(parameters["b"]) ** 2
# Katib parses metrics in this format: <metric-name>=<metric-value>.
print(f"result={result}")
# Step 2. Create HyperParameter search space.
parameters = {
"a": katib.search.int(min=10, max=20),
"b": katib.search.double(min=0.1, max=0.2)
}
# Step 3. Create Katib Experiment.
katib_client = katib.KatibClient()
name = "tune-experiment"
katib_client.tune(
name=name,
objective=objective,
parameters=parameters,
objective_metric_name="result",
max_trial_count=12
)
# Step 4. Get the best HyperParameters.
print(katib_client.get_optimal_hyperparameters(name))
```
# Documentation
- Check
[the Katib getting started guide](https://www.kubeflow.org/docs/components/katib/hyperparameter/#example-using-random-search-algorithm).
- Learn about Katib **Concepts** in this
[guide](https://www.kubeflow.org/docs/components/katib/overview/#katib-concepts).
- Learn about Katib **Interfaces** in this
[guide](https://www.kubeflow.org/docs/components/katib/overview/#katib-interfaces).
- Learn about Katib **Components** in this
[guide](https://www.kubeflow.org/docs/components/katib/hyperparameter/#katib-components).
- Know more about Katib in the [presentations and demos list](./docs/presentations.md).
# Community
We are always growing our community and invite new users and AutoML enthusiasts
to contribute to the Katib project. The following links provide information
about getting involved in the community:
- Subscribe to the
[AutoML calendar](https://calendar.google.com/calendar/u/0/r?cid=ZDQ5bnNpZWZzbmZna2Y5MW8wdThoMmpoazRAZ3JvdXAuY2FsZW5kYXIuZ29vZ2xlLmNvbQ)
to attend Working Group bi-weekly community meetings.
- Check the
[AutoML and Training Working Group meeting notes](https://docs.google.com/document/d/1MChKfzrKAeFRtYqypFbMXL6ZIc_OgijjkvbqmwRV-64/edit).
- If you use Katib, please update [the adopters list](ADOPTERS.md).
## Contributing
Please feel free to test the system! [Developer guide](./docs/developer-guide.md)
is a good starting point for our developers.
## Blog posts
- [Kubeflow Katib: Scalable, Portable and Cloud Native System for AutoML](https://blog.kubeflow.org/katib/)
(by Andrey Velichkevich)
## Events
- [AutoML and Training WG Summit. 16th of July 2021](https://docs.google.com/document/d/1vGluSPHmAqEr8k9Dmm82RcQ-MVnqbYYSfnjMGB-aPuo/edit?usp=sharing)
## Citation
If you use Katib in a scientific publication, we would appreciate
citations to the following paper:
[A Scalable and Cloud-Native Hyperparameter Tuning System](https://arxiv.org/abs/2006.02085), George _et al._, arXiv:2006.02085, 2020.
Bibtex entry:
```
@misc{george2020katib,
title={A Scalable and Cloud-Native Hyperparameter Tuning System},
author={Johnu George and Ce Gao and Richard Liu and Hou Gang Liu and Yuan Tang and Ramdoot Pydipaty and Amit Kumar Saha},
year={2020},
eprint={2006.02085},
archivePrefix={arXiv},
primaryClass={cs.DC}
}
```
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