https://github.com/genome/genome
Merged the TCGA importer into the basic importer. More PRs to come to smooth out the interface.
- HEAD
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Merge pull request #377 from ebelter/instdata-import
# genome-search-index-queue
#
# This is the daemon that monitors the search index queue to add/remove
# items to our search engine.
#
# *** This is in version control.
# *** Do not make changes to this file directly.
description "genome search index queue"
start on runlevel [2345]
stop on runlevel [!2345]
respawn
env RUN_AS_USER='apipe-builder'
env LOG_DIR='/var/log/genome'
env LOG_FILE="/var/log/genome/search-index-queue.log"
umask 0755
pre-start script
if [ ! -d "$LOG_DIR" ]; then
mkdir -p "$LOG_DIR"
chmod 755 "$LOG_DIR"
chown "$RUN_AS_USER" "$LOG_DIR"
fi
end script
script
GENOME=$(/gsc/scripts/sbin/gsc-cron-user which genome)
exec sudo -i -u $RUN_AS_USER /gsc/scripts/sbin/gsc-cron-user $GENOME sys search index daemon --noconfirm --noscreen --log-file-level info --log-file $LOG_FILE
end script
Computing file changes ...