https://github.com/lennartverhagen/Pipelines
Revision 0e155850d0881ed9b9363dea61f43530e29ff11a authored by Matt Glasser on 12 December 2013, 00:37:02 UTC, committed by Matt Glasser on 12 December 2013, 00:37:02 UTC
*Add MSMSulc as an optional registration method. Note that MSM must be installed (not included in the repository) and its path set in the environment variable script Examples/Scripts/SetUpHCPPipeline.sh. Also add FreeSurfer and MSMSulc distortion maps *Add ability to use multiple low resolution meshes and grayordinates voxel spaces (may be needed for 7T processing). These must be defined in advance and put in the templates folders. *Some code cleanup *Fix zeros in the greyordinates space because of bad medial wall definition bug *Add standard flat maps to spec files (if available) *Fix bug where left and right hemisphere FreeSurfer labels were combined in grayordinates space *Optionally allow myelin map bias field correction smoothing to be varied (default is previous hardcoded value) *Fix bug in adaptive barycentric resampling algorithm (i.e. new version of wb_command in previous commit)
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Tip revision: 0e155850d0881ed9b9363dea61f43530e29ff11a authored by Matt Glasser on 12 December 2013, 00:37:02 UTC
PostFreeSurfer Changes:
PostFreeSurfer Changes:
Tip revision: 0e15585
File | Mode | Size |
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DiffusionPreprocessing | ||
DiffusionTractography | ||
Examples | ||
FreeSurfer | ||
PostFreeSurfer | ||
PreFreeSurfer | ||
TaskfMRIAnalysis | ||
fMRISurface | ||
fMRIVolume | ||
global | ||
src | ||
tfMRI | ||
ReadMe.txt | -rwxr-xr-x | 1.3 KB |
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