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Revision 13492bf45888f5b55d194881d9da8b9040b9984e authored by Thorsten Becker on 29 August 2007, 00:51:20 UTC, committed by Thorsten Becker on 29 August 2007, 00:51:20 UTC 
When checking in my changes, I had to resolve a conflict for
 
lib/Instructions.c by hand, which I hope I did properly. Here are my changes:

- renamed CONTOL structure members ORTHO and ORTHOZ to CITCOM_ORTHO and CITCOM_ORTHOZ
  Those were never used and conflicted with definitions in GMT gmt.h

- Added a higher frequency heat flow output option like so:

 
write_q_files=1                       # option to write heat flux to files qt.dat and qb.dat 
                                      # at intervals smaller than storage_spacing (0)


- Added the capability to read in initial temperatures from netcdf grd files, if -USE_GGRD is used. 
  Lot of options, like so:

#
# read initial temperature conditions from grd files (default values in parentheses)
#
tic_method=4                          # read initial temperature from netcdf GRD files (off)

ggrd_tinit_scale_with_prem=off        # scale the temperature with PREM densities (off)

ggrd_tinit_scale=1.0                  # scaling factor to apply to read in scalars f (1.0)

ggrd_tinit_offset=-0.5                 # offset, T = f * scale + offset + tm   (0.0)
                                       # where tm is the mean between top and bottom TBC values
                                       # if the bottom is flux, will use 1 for bottom TBC value

ggrd_tinit_gfile="../../data/tomography/s20a_smean_new_age/t" # prefix of grd files, will 
                                                              # try to read t.1.grd, t.2.grd ... t.n.grd
                                                              # where n is the number of layers in the depth file
ggrd_tinit_dfile="../../data/tomography/s20a_smean_new_age/tdepth.dat" # file with layer depths in km from bottom up

ggrd_tinit_prem_file="../../progs/src/hc-svn/prem/prem.dat"  # PREM data file
ggrd_tinit_override_tbc=on            # override temperature boundary conditions (off)
1 parent 3ba2a04
Raw File
Material_properties.c 
/*
 *~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 *
 *<LicenseText>
 *
 * CitcomS by Louis Moresi, Shijie Zhong, Lijie Han, Eh Tan,
 * Clint Conrad, Michael Gurnis, and Eun-seo Choi.
 * Copyright (C) 1994-2005, California Institute of Technology.
 *
 * This program is free software; you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
 * the Free Software Foundation; either version 2 of the License, or
 * (at your option) any later version.
 *
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU General Public License for more details.
 *
 * You should have received a copy of the GNU General Public License
 * along with this program; if not, write to the Free Software
 * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
 *
 *</LicenseText>
 *
 *~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 */

#ifdef HAVE_CONFIG_H
#include "config.h"
#endif

#include <math.h>

#include "global_defs.h"
#include "material_properties.h"


void mat_prop_allocate(struct All_variables *E)
{
    int noz = E->lmesh.noz;
    int nno = E->lmesh.nno;
    int nel = E->lmesh.nel;

    /* reference profile of density */
    E->refstate.rho = (double *) malloc((noz+1)*sizeof(double));

    /* reference profile of coefficient of thermal expansion */
    E->refstate.thermal_expansivity = (double *) malloc((noz+1)*sizeof(double));

    /* reference profile of heat capacity */
    E->refstate.heat_capacity = (double *) malloc((noz+1)*sizeof(double));

    /* reference profile of thermal conductivity */
    E->refstate.thermal_conductivity = (double *) malloc((noz+1)*sizeof(double));

    /* reference profile of gravity */
    E->refstate.gravity = (double *) malloc((noz+1)*sizeof(double));

    /* reference profile of temperature */
    E->refstate.Tadi = (double *) malloc((noz+1)*sizeof(double));

}


void reference_state(struct All_variables *E)
{
    int noz = E->lmesh.noz;
    int nel = E->lmesh.nel;
    int i;
    double r, z, beta, T0;

    beta = E->control.disptn_number * E->control.inv_gruneisen;
    T0 = E->control.surface_temp / E->data.ref_temperature;

    /* All refstate variables (except Tadi) must be 1 at the surface.
     * Otherwise, the scaling of eqns in the code might not be correct. */

    for(i=1; i<=noz; i++) {
	r = E->sx[1][3][i];
	z = 1 - r;
	E->refstate.rho[i] = exp(beta*z);
	E->refstate.thermal_expansivity[i] = 1;
	E->refstate.heat_capacity[i] = 1;
	E->refstate.thermal_conductivity[i] = 1;
	E->refstate.gravity[i] = 1;
	E->refstate.Tadi[i] = T0 * (exp(E->control.disptn_number * z) - 1);
    }

    if(E->parallel.me == 0) {
        fprintf(stderr, "nz  radius   depth    rho          Tadi\n");
        fprintf(E->fp, "nz  radius   depth    rho          Tadi\n");
    }
    if(E->parallel.me < E->parallel.nprocz)
        for(i=1; i<=noz; i++) {
            fprintf(stderr, "%d %f %f %e %e\n",
                    i+E->lmesh.nzs-1, E->sx[1][3][i], 1-E->sx[1][3][i],
                    E->refstate.rho[i], E->refstate.Tadi[i]);
            fprintf(E->fp, "%d %f %f %e %e\n",
                    i+E->lmesh.nzs-1, E->sx[1][3][i], 1-E->sx[1][3][i],
                    E->refstate.rho[i], E->refstate.Tadi[i]);
        }

}
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