Revision 15a09f1b3e01fb7cfdbe7542902d705d15848a14 authored by Thorsten Becker on 14 January 2012, 08:00:41 UTC, committed by Thorsten Becker on 14 January 2012, 08:00:41 UTC
can be assigned without setting ibuoy=1 and the buoyancy number to zero.
1 parent c9704b3
batchsurf.py
#!/usr/bin/env python
#
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
#
#<LicenseText>
#
# CitcomS.py by Eh Tan, Eun-seo Choi, and Pururav Thoutireddy.
# Copyright (C) 2002-2005, California Institute of Technology.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 2 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
#
#</LicenseText>
#
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
#
'''
Combine Citcom Surface Data
usage: batchsurf.py machinefile modeldir modelname timestep nodex nodey nodez n_surf_proc nprocx nprocy nprocz
'''
if __name__ == '__main__':
import sys, os
if not len(sys.argv) == 12:
print __doc__
sys.exit(1)
machinefile = sys.argv[1]
modeldir = sys.argv[2]
modelname = sys.argv[3]
timestep = int(sys.argv[4])
nodex = int(sys.argv[5])
nodey = int(sys.argv[6])
nodez = int(sys.argv[7])
ncap = int(sys.argv[8])
nprocx = int(sys.argv[9])
nprocy = int(sys.argv[10])
nprocz = int(sys.argv[11])
# generate a string of machine names
from batchcombine import machinefile2nodes
totalnodes = nprocx * nprocy * nprocz * ncap
nodes = machinefile2nodes(machinefile, totalnodes)
# extract machines at the surface
tmp = nodes.split()[(nprocz-1)::nprocz]
nodes = ' '.join(tmp)
# get coordinate, if necessary
coord_exist = True
for n in range(totalnodes):
coord_file = '%(modelname)s.coord.%(n)d' % vars()
coord_exist &= os.path.exists(coord_file)
if not coord_exist:
cmd = 'getcoord.sh %(modeldir)s %(modelname)s %(nprocz)d %(nodes)s' % vars()
print cmd
os.system(cmd)
# get surf data
cmd = 'getsurf.sh %(modeldir)s %(modelname)s %(timestep)d %(nprocz)d %(nodes)s' % vars()
print cmd
os.system(cmd)
# combine
cmd = 'combinesurf.py %(modelname)s %(timestep)d %(nodex)d %(nodey)d %(nodez)d %(ncap)d %(nprocx)d %(nprocy)d %(nprocz)d' % vars()
print cmd
os.system(cmd)
# delete modelname.surf.* files, only if the originial data is not
# stored in the current directory, ie. if velofile exists
velofile = '%(modelname)s.velo.0.%(timestep)d' % vars()
if not os.path.exists(velofile):
cmd = 'rm %(modelname)s.surf.[0-9]*.%(timestep)d' % vars()
print cmd
os.system(cmd)
# create .general file
cmd = 'dxgeneralsurf.sh %(modelname)s.surf[0-9]*.%(timestep)d' % vars()
print cmd
os.system(cmd)
# version
# $Id$
# End of file
![swh spinner](/static/img/swh-spinner.gif)
Computing file changes ...