Revision 1732ada9c8b7f1432fe3fd494fa00a27e29425ff authored by simkind on 16 March 2024, 19:13:22 UTC, committed by GitHub on 16 March 2024, 19:13:22 UTC
1 parent 7a7d099
save_drugspikes.m
% Results should be struct containing sweeps
function [Results] = save_drugspikes(Results,filename)
[Results] = bracket2nan(Results); % convert empty brackets into NaN
label = {'ABF File','Sweep','Spike Number','Baseline (mV)','Spike Times (ms)','Spike Amplitude (mV)','Spike Threshold Time (ms)','Spike Threshold (mV)',...
'Spike 1/2 Width-Baseline (ms)','Spike 1/2 Width-Threshold (ms)','Spike 1/2 Width 1st Width-Baseline (ms)','FastAHP Time (ms)','FastAHP Voltage(mV)','ISI (ms)'};
writethis = [];
for i = 1:length(Results) % for each sweep
numspikes = Results(i).num_spikes;
if numspikes > 1
writethistemp = [];
for s = 1:numspikes
writethistempspike = [];
writethistempspike = [cellstr(filename), i, s, num2cell(Results(i).baseline_potential),...
num2cell(Results(i).peak_times(s)), num2cell(Results(i).peak_to_baseline(s)),num2cell(Results(i).threshold_time(s)),...
num2cell(Results(i).threshold_amplitude(s)),num2cell(Results(i).SpikeWidth_Baseline(s)),num2cell(Results(i).SpikeWidth_Threshold(s)),...
num2cell(Results(i).SpikeWidth_FirstSpike(s)), num2cell(Results(i).FastAHP_Time(s)), num2cell(Results(i).FastAHP_Voltage(s))];
writethistemp = [writethistemp; writethistempspike];
end
writethistemp = [writethistemp, num2cell([NaN;Results(i).ISI])];
else
if numspikes == 1
s = 1;
else
s = NaN;
end
A = NaN;
writethistemp = [];
writethistemp = [cellstr(filename), i,s, num2cell(Results(i).baseline_potential),...
num2cell(Results(i).peak_times), num2cell(Results(i).peak_to_baseline),num2cell(Results(i).threshold_time),...
num2cell(Results(i).threshold_amplitude),num2cell(Results(i).SpikeWidth_Baseline),num2cell(Results(i).SpikeWidth_Threshold),...
num2cell(Results(i).SpikeWidth_FirstSpike), num2cell(Results(i).FastAHP_Time), num2cell(Results(i).FastAHP_Voltage),num2cell(A)];
end
writethis = [writethis; writethistemp];
end
writethiswithlabel = [label; writethis];
Table = writethiswithlabel;
xlswrite(sprintf('%s Drugspikes.xlsx',filename),writethiswithlabel)
save(sprintf('%s Drugspikes.mat',filename),'Results','Table')
end
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