Revision 23cd1f4388a2978d07eb46ac6622e85d89c42718 authored by Chase W. Nelson on 17 September 2020, 09:57:29 UTC, committed by Chase W. Nelson on 17 September 2020, 09:57:29 UTC
1 parent d6fadf3
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File Mode Size
data
.gitattributes -rw-r--r-- 66 bytes
ORF_length.R -rw-r--r-- 9.0 KB
README.md -rw-r--r-- 21.5 KB
SARS-CoV-2_locate_genes.pl -rwxr-xr-x 13.0 KB
aligned_fasta2haplotypes.pl -rwxr-xr-x 10.9 KB
extract_fasta_by_sites.pl -rwxr-xr-x 8.0 KB
extract_seq_subset.py -rwxr-xr-x 2.3 KB
extract_variable_columns_MSA.py -rwxr-xr-x 4.4 KB
extract_variable_columns_MSA_aa.py -rwxr-xr-x 4.4 KB
filter_VCF.py -rwxr-xr-x 10.4 KB
generate_random_protein.py -rwxr-xr-x 2.8 KB
generate_seqs_from_VCF.py -rwxr-xr-x 7.8 KB
riboseq_sliding_window.R -rw-r--r-- 8.1 KB
summarize_intrahost_by_site.py -rwxr-xr-x 26.0 KB
tally_epitope_coverage.py -rwxr-xr-x 3.1 KB
translate_nt_seq_file.pl -rwxr-xr-x 6.1 KB

README.md

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