Revision 25184cfdafa12e862cbf7b22fbd39cd18c349fe7 authored by Christoph PĆ¼the on 29 January 2021, 16:16:24 UTC, committed by GitHub on 29 January 2021, 16:16:24 UTC
1 parent 2be742a
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environment.yml
name: gubbins_env
channels:
  - conda-forge
  - bioconda
  - defaults
  - r
dependencies:
# python
  - python>=3.8
# installation
  - autoconf
  - automake
  - pytest
  - check
  - libtool
  - cppunit
  - pkg-config
  - wheel
  - nose
  - pillow
# algorithm
  - scipy
  - dendropy
  - biopython
  - multiprocess
  - numpy
# phylogenetics
  - raxml=8.2.12
  - iqtree=2.0.3
  - rapidnj
  - raxml-ng=1.0.1
  - fasttree=2.1.10
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