https://github.com/fabrylab/shear_flow_deformation_cytometer

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Revision Author Date Message Commit Date
2d35a69 fixed exclude dark areas in fluorescence evaluation 20 April 2022, 07:50:46 UTC
76abeec fixed loading of files to include meta files 07 April 2022, 16:34:22 UTC
4a5220e exclude dark areas in fluorescence evaluation 07 April 2022, 12:21:20 UTC
57ccf95 added fill_value="extrapolate" to interp1d for velocity fitting to fix ValueError bug 30 March 2022, 14:05:54 UTC
20508c8 fixed new velocity fit 28 March 2022, 13:55:50 UTC
c9bbb6b the evaluation now uses the new fit function 24 March 2022, 21:04:32 UTC
70bbd73 added new velocity fit function 24 March 2022, 21:01:51 UTC
b17eaa9 plot_density_hist changed !isnan to isfinite to also filter infinite values 21 March 2022, 14:43:13 UTC
db4731f new flatfield correction 18 March 2022, 09:33:34 UTC
d1c0544 ignoring nan values in fluorescence evaluation 23 February 2022, 15:14:33 UTC
aab8d53 fixed rounding timestamps 22 February 2022, 21:01:56 UTC
413fb7e fixed evaluation for measurements without fluorescence 22 February 2022, 19:30:11 UTC
ce6ecc6 clear overview plot to prevent from having multiple plots in the same file 18 February 2022, 21:03:33 UTC
8eaeb90 fixed typo in fluorescence_intensity.py filename 18 February 2022, 20:47:24 UTC
0cb3cd9 added fluorescence evaluation to pipeline 18 February 2022, 20:39:27 UTC
d9811bc some small fixes to recording 18 February 2022, 16:26:37 UTC
c654312 more code restructuring in record gui 17 February 2022, 22:14:04 UTC
3d90539 recording script code clean up 17 February 2022, 21:29:59 UTC
d944d28 restructured recording code to separate threads 17 February 2022, 20:53:20 UTC
c8ef59c do not round of microseconds from timestamp 17 February 2022, 16:14:24 UTC
a8564a1 increased tensorflow version to calm Dependabot 17 February 2022, 15:57:01 UTC
b733d68 round timestamp according to framerate 17 February 2022, 15:56:43 UTC
58b6ccb adapted gui browser to new names of columns 17 February 2022, 15:56:20 UTC
f06fcc7 fixed numerical instability of velocity fit 17 February 2022, 15:54:31 UTC
0bf6005 matchVelocities do prevent division by zero 16 February 2022, 16:04:57 UTC
b10fecd plot_density_scatter do not crash when KDE fails 16 February 2022, 16:04:33 UTC
8391b6f plot overview plot with evaluation 15 February 2022, 21:47:52 UTC
36a5301 added overview_plot.pyiew plot 15 February 2022, 21:47:35 UTC
871071f make velocity fit robust to outliers 15 February 2022, 18:53:10 UTC
42e5944 fixed loading from new output filename format 11 February 2022, 22:11:21 UTC
b70d25d do not skip errors on correctCenter 11 February 2022, 22:11:05 UTC
01e5919 rename property velocity to velocity_measured 11 February 2022, 22:10:47 UTC
74172be remove outlier velocities for correctCenter 11 February 2022, 21:17:57 UTC
02fdd04 gui_run_evaluation.py dialog now asks for existing network file 11 February 2022, 20:50:30 UTC
59e7a50 rmin as command line argument was ignored 11 February 2022, 20:49:34 UTC
3bbe898 added units 11 February 2022, 16:20:08 UTC
3945d9b fixed "force reevaluation" feature 07 January 2022, 13:19:56 UTC
1aa4643 fixed imports in gui_run_evaluation.py 07 January 2022, 11:38:39 UTC
f08f356 removed creation of _result_new.csv 07 January 2022, 11:31:52 UTC
c245d22 removed add_units for now 07 January 2022, 11:31:25 UTC
0362c1e fixed paths in gui_run_evaluation.py 07 January 2022, 11:30:45 UTC
704652f Fixed: "Choose File" dialog didn't show any files 07 January 2022, 11:23:41 UTC
cf5038b Added pyQt5 07 January 2022, 10:51:34 UTC
b5fc03b Added "Reevaluate", tooltips to GUI and small optical changes 07 January 2022, 10:51:19 UTC
05e1121 fixed errors when reloading cameras 21 December 2021, 15:23:33 UTC
a543e31 added one camera mode 21 December 2021, 15:08:41 UTC
20bc694 added setup.py 21 December 2021, 13:47:32 UTC
d55840d renamed folder shear_flow_defornation_cytometer 21 December 2021, 13:40:19 UTC
8c71fbe refactored cameras in recording gui 21 December 2021, 13:40:19 UTC
313ea71 Update train.rst 21 December 2021, 09:19:47 UTC
c37d879 Update train.rst 21 December 2021, 08:46:01 UTC
22669e0 added docs 16 December 2021, 15:46:22 UTC
193fce7 added recording script 09 December 2021, 22:09:42 UTC
f4b46cc fixed evaluation without clickpoints 08 December 2021, 21:05:42 UTC
04eb7b9 moved files from old repository 03 December 2021, 16:33:54 UTC
1030048 Initial commit 02 December 2021, 21:35:35 UTC
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