Skip to main content
  • Home
  • Development
  • Documentation
  • Donate
  • Operational login
  • Browse the archive

swh logo
SoftwareHeritage
Software
Heritage
Archive
Features
  • Search

  • Downloads

  • Save code now

  • Add forge now

  • Help

https://github.com/kussell-lab/mcorr
23 January 2022, 09:11:33 UTC
  • Code
  • Branches (5)
  • Releases (0)
  • Visits
Revision 350ea8b8d560df6cca92a48793fcf48861454810 authored by Asher Preska Steinberg on 06 January 2021, 17:19:02 UTC, committed by Asher Preska Steinberg on 06 January 2021, 17:19:02 UTC
APS158.5 commit; update for clusterSequences.py with more options, better stats output
1 parent fd96d63
  • Files
  • Changes
    • Branches
    • Releases
    • HEAD
    • refs/heads/2019natmethods
    • refs/heads/2021biorxiv
    • refs/heads/dev
    • refs/heads/master
    • refs/heads/x
    • 350ea8b8d560df6cca92a48793fcf48861454810
    No releases to show
  • 00c9a43
  • /
History
Cook and download a directory from the Software Heritage Vault

You have requested the cooking of the directory with identifier swh:1:dir:00c9a43094c2e29ca5e573e04a9814f7aabbfbb3 into a standard tar.gz archive.

Are you sure you want to continue ?

Download a directory from the Software Heritage Vault

You have requested the download of the directory with identifier swh:1:dir:00c9a43094c2e29ca5e573e04a9814f7aabbfbb3 as a standard tar.gz archive.

Are you sure you want to continue ?

Cook and download a revision from the Software Heritage Vault

You have requested the cooking of the history heading to revision with identifier swh:1:rev:350ea8b8d560df6cca92a48793fcf48861454810 into a bare git archive.

Are you sure you want to continue ?

Download a revision from the Software Heritage Vault

You have requested the download of the history heading to revision with identifier swh:1:rev:350ea8b8d560df6cca92a48793fcf48861454810 as a bare git archive.

Are you sure you want to continue ?

Invalid Email !

The provided email is not well-formed.

Download link has expired

The requested archive is no longer available for download from the Software Heritage Vault.

Do you want to cook it again ?

Take a new snapshot of a software origin

If the archived software origin currently browsed is not synchronized with its upstream version (for instance when new commits have been issued), you can explicitly request Software Heritage to take a new snapshot of it.

Use the form below to proceed. Once a request has been submitted and accepted, it will be processed as soon as possible. You can then check its processing state by visiting this dedicated page.
swh spinner

Processing "take a new snapshot" request ...

Permalinks

To reference or cite the objects present in the Software Heritage archive, permalinks based on SoftWare Hash IDentifiers (SWHIDs) must be used.
Select below a type of object currently browsed in order to display its associated SWHID and permalink.

  • revision
  • directory
  • snapshot
origin badgerevision badge
swh:1:rev:350ea8b8d560df6cca92a48793fcf48861454810
origin badgedirectory badge Iframe embedding
swh:1:dir:00c9a43094c2e29ca5e573e04a9814f7aabbfbb3
origin badgesnapshot badge
swh:1:snp:bc0e5aa6513599be660f007d7b46ba12cce5b7e5
Citations

This interface enables to generate software citations, provided that the root directory of browsed objects contains a citation.cff or codemeta.json file.
Select below a type of object currently browsed in order to generate citations for them.

  • revision
  • directory
  • snapshot
Generate software citation in BibTex format (requires biblatex-software package)
Generating citation ...
Generate software citation in BibTex format (requires biblatex-software package)
Generating citation ...
Generate software citation in BibTex format (requires biblatex-software package)
Generating citation ...
Tip revision: 350ea8b8d560df6cca92a48793fcf48861454810 authored by Asher Preska Steinberg on 06 January 2021, 17:19:02 UTC
APS158.5 commit; update for clusterSequences.py with more options, better stats output
Tip revision: 350ea8b
FileModeSize
.idea
cmd
core_flex
mcorr-dm
python
submission_scripts
.gitignore -rw-r--r--263 bytes
MSA_Merge_HighRAM.py -rw-r--r--3.2 KB
README.md -rw-r--r--4.5 KB
bootstrap.go -rw-r--r--1.2 KB
collect.go -rw-r--r--2.0 KB
collector.go -rw-r--r--2.2 KB
corr_results.go -rw-r--r--292 bytes
deterministic_choose_strains.py -rw-r--r--2.9 KB
mean_var.go -rw-r--r--1.7 KB
mean_var_test.go -rw-r--r--1.6 KB
nucl_cov.go -rw-r--r--4.5 KB
random_choose_strains.py -rw-r--r--2.8 KB

The diff you're trying to view is too large. Only the first 1000 changed files have been loaded.
Showing with 0 additions and 0 deletions (0 / 0 diffs computed)
swh spinner

Computing file changes ...

README.md

swh spinner

Loading README.md ...

back to top

Software Heritage — Copyright (C) 2015–2025, The Software Heritage developers. License: GNU AGPLv3+.
The source code of Software Heritage itself is available on our development forge.
The source code files archived by Software Heritage are available under their own copyright and licenses.
Terms of use: Archive access, API— Contact— JavaScript license information— Web API