Revision 394191f655a0169185955856cb5accc80a5e1a5d authored by Isaac Virshup on 15 June 2022, 21:23:42 UTC, committed by GitHub on 15 June 2022, 21:23:42 UTC
* Fix reference image for visium test

Reference image should just be black square since the image is black, and when an image is included the points default to transparent.

* Update paga reference plots for igraph 0.9.11

igraph 0.9.11 seems to change the results for the "fr" layout significantly.

* No longer check that random seed changes 32 bit pca computation

It seems to have gotten more accurate, at least on CI platforms.

* Unlink old reference

* Bump down leiden resolution

Some CI jobs were splitting a larger cluster

* Unlink more old references

* Bigger bandaid
1 parent bd06cc3
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CONTRIBUTING.md
Contributing
============

Contributions to Scanpy are highly welcome!

Before filing an issue
----------------------
* Search the repository (also google) to see if someone has already reported the same issue.
  This allows contributors to spend less time responding to issues, and more time adding new features!
* Please provide a minimal complete verifiable example for any bug.
  If you're not sure what this means, check out
  [this blog post](http://matthewrocklin.com/blog/work/2018/02/28/minimal-bug-reports)
  by Matthew Rocklin or [this definition](https://stackoverflow.com/help/mcve) from StackOverflow.
* Let us know about your environment. Environment information is available via: `sc.logging.print_versions()`.

Contributing code
-----------------

We love code contributions!
If you're interested in contributing code, please take a look over the [contributing guide](https://scanpy.readthedocs.io/en/latest/dev/index.html) in the main documentation.
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