https://github.com/ctlab/phantasus
Revision 3b86c80ea2da014034dcb987653fd4c9f0b765ca authored by Alexey Sergushichev on 01 August 2023, 21:54:51 UTC, committed by Alexey Sergushichev on 01 August 2023, 21:54:51 UTC
Tip revision: 3b86c80ea2da014034dcb987653fd4c9f0b765ca authored by Alexey Sergushichev on 01 August 2023, 21:54:51 UTC
Merge branch 'master' into new_normalizations
Merge branch 'master' into new_normalizations
Tip revision: 3b86c80
calcPCA.Rd
% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/calcPCA.R
\name{calcPCA}
\alias{calcPCA}
\title{Principal Component Analysis.}
\usage{
calcPCA(es, replacena = "mean")
}
\arguments{
\item{es}{an ExpressionSet object, should be normalized}
\item{replacena}{method for replacing NA values (mean by default)}
}
\value{
json with full description of the plot for plotly.js
}
\description{
\code{calcPCA} calculates PCA-matrix for the given ExpressionSet
and returns this matrix encoded to JSON.
}
\examples{
\dontrun{
data(es)
calcPCA(es)
}
}
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