Revision 42b3c6ebb50ecaabf92e3d168da1be05a640f9f2 authored by davelopez on 11 May 2022, 14:31:46 UTC, committed by davelopez on 11 May 2022, 14:31:46 UTC
1 parent 06d37d9
joiner2.xml
<tool id="joiner2" name="Relational join 2" version="1.0.0">
<description>two datasets a specific column of which has the same value</description>
<command>sort -k $col1 $input1 > $input1.tmp; sort -k $col2 $input2 > $input2.tmp; join -1 $col1 -2 $col2 $input1.tmp $input2.tmp | tr " " "\t" > $out_file1; rm -rf $input1.tmp $input2.tmp </command>
<inputs>
<param name="input1" label="Combine dataset" format="tabular" type="data" />
<param name="col1" label="using column" type="data_column" data_ref="input1" />
<param name="input2" label="with dataset" format="tabular" type="data"/>
<param name="col2" label="and column" type="data_column" data_ref="input2" />
</inputs>
<outputs>
<data format="input" name="out_file1" metadata_source="input1" />
</outputs>
</tool>
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