https://github.com/ctlab/phantasus
Revision 42e0e7e39e87f3267385ba63b71571ac855334eb authored by petrovich on 22 September 2019, 10:41:00 UTC, committed by petrovich on 22 September 2019, 10:41:00 UTC
1 parent 48cbc7b
Tip revision: 42e0e7e39e87f3267385ba63b71571ac855334eb authored by petrovich on 22 September 2019, 10:41:00 UTC
GEO: Safer brief data downloader
GEO: Safer brief data downloader
Tip revision: 42e0e7e
NAMESPACE
# Generated by roxygen2: do not edit by hand
export(getES)
export(getGDS)
export(getGSE)
export(read.gct)
export(reparseCachedESs)
export(servePhantasus)
export(write.gct)
import(Biobase)
import(GEOquery)
import(Rook)
import(ccaPP)
import(ggplot2)
import(grid)
import(gtable)
import(htmltools)
import(httpuv)
import(jsonlite)
import(limma)
import(opencpu)
import(rhdf5)
import(stats)
import(svglite)
importFrom(AnnotationDbi,columns)
importFrom(AnnotationDbi,keys)
importFrom(AnnotationDbi,loadDb)
importFrom(AnnotationDbi,mapIds)
importFrom(AnnotationDbi,species)
importFrom(fgsea,fgseaMultilevel)
importFrom(fgsea,plotEnrichment)
importFrom(ggplot2,ggtitle)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,dev.off)
importFrom(grDevices,svg)
importFrom(methods,new)
importFrom(parallel,makeCluster)
importFrom(parallel,stopCluster)
importFrom(utils,download.file)
importFrom(utils,getFromNamespace)
importFrom(utils,head)
importFrom(utils,read.table)
importFrom(utils,tail)
importFrom(utils,write.table)
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