https://github.com/bjm5164/Mark2020_larval_development

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Revision Author Date Message Commit Date
43e0a22 Update strahler_number.m 12 January 2021, 06:06:31 UTC
1b609c4 Update strahler_number.m 12 January 2021, 06:06:06 UTC
f81a86e Update split_axon_dendrite.m 12 January 2021, 06:05:03 UTC
b1fce53 Update filling_fraction.m 12 January 2021, 06:03:27 UTC
2e2497f Updates 14 December 2020, 22:28:26 UTC
8c2ca03 Updates 14 December 2020, 22:28:11 UTC
2800bab Updates 14 December 2020, 22:25:42 UTC
e76b95e Create connectivity_dotprod.m 08 December 2020, 15:48:49 UTC
21e2e9d Create connectivity_structure_cohorts.m 08 December 2020, 15:48:46 UTC
a5f8106 Delete shared_targeting_calculations.m~ 08 December 2020, 15:48:36 UTC
7d5ead0 Create similarity_parameter_search_may18.mat 08 December 2020, 15:48:32 UTC
31b7900 Create tc_connectivity_distance.m 08 December 2020, 15:48:27 UTC
86ac869 Update Temporal_only_comparisons.m 24 November 2020, 21:29:21 UTC
a73ee6f Update hemilineage_synapse_clustering.m 24 November 2020, 21:29:15 UTC
03b6e58 Update full_lineage_densities.m 24 November 2020, 21:28:56 UTC
05a4e36 Create connectivity_similarity.m 24 November 2020, 21:28:37 UTC
4d9ccc2 Update .gitignore 24 November 2020, 21:28:27 UTC
eb33f90 Create NB12_analysis.m 28 September 2020, 16:32:35 UTC
f47f693 Impoved layout 28 September 2020, 16:32:29 UTC
3ad07f0 Addeed ability to provide distance matrix, or generate one. 28 September 2020, 16:32:18 UTC
22d12ff Update Synapse_Distributions.m 28 September 2020, 16:31:54 UTC
396c312 Create shared_targeting_calculations.m~ 28 September 2020, 16:31:30 UTC
ac5216d Create temporal_cohort_connectivity_quantifications_1.m 28 September 2020, 16:31:23 UTC
b47cffe Update temporal_cohort_co_targeting.m 28 September 2020, 16:31:13 UTC
65b66a6 Update Similarity_Parameter_search.m 28 September 2020, 16:31:06 UTC
406fe27 Create shared_targeting_calculations.m 28 September 2020, 16:30:53 UTC
c738c4c Reogranized all synapse comparisons into a structure. This is still a nightmare, need to fix. 28 September 2020, 16:30:39 UTC
6a5e294 Removed NB1-2 and adjusted outgroups Outgroups were not stringent enough before. For example, "temporal_unrelated" which was the broadest outgroup only made sure to not include temporally related neurons, but would include hemilineage related neurons that were not in the same temporal cohort. Now, unrelated excludes pairs of neurons with any developmental mechanism in common, except for being dorsal/ventral. Hemilineage related excludes hemilineage related temporal cohorts. 28 September 2020, 16:30:00 UTC
075b041 Create temporal_targting_quantification.m 28 September 2020, 16:28:14 UTC
6404cb8 Updated synapse_similarity sigma 28 September 2020, 16:28:06 UTC
5868a25 Create temporal_synapse_distributions.m 28 September 2020, 16:27:37 UTC
c86de5f Added plots 28 September 2020, 16:27:32 UTC
e85db4e Create Temporal_only_comparisons.m 28 September 2020, 16:27:23 UTC
5e5fdc9 Create potential_connectivity_qc.m 28 September 2020, 16:26:28 UTC
e4f5a89 Delete Potential_Connectivity.m~ 28 September 2020, 16:26:24 UTC
593d846 Switched similarity matrix to use 28 September 2020, 16:26:21 UTC
0f7cc16 Updated neuron lists 28 September 2020, 16:25:50 UTC
ae6a5da cleaned up documentation 28 September 2020, 16:25:39 UTC
3d0d20c Create birth_order_metricsv3.m 22 August 2020, 00:00:48 UTC
b77817f Update get_adjacency.m 20 August 2020, 16:19:58 UTC
15b2f17 Initial commit 20 August 2020, 16:19:24 UTC
cf1f13c Reordered graphs 20 August 2020, 16:19:03 UTC
92650d6 Added synapse threshold 21 May 2020, 22:59:56 UTC
0d2b541 added connection probabilities 19 May 2020, 22:54:05 UTC
9182643 better comments 19 May 2020, 22:53:43 UTC
6cad943 Fixed soma coloring options 19 May 2020, 22:53:27 UTC
9cb683e added synapse coloring options 19 May 2020, 21:06:45 UTC
075ad72 Added ability to collect raw distances 19 May 2020, 21:06:34 UTC
53ae226 Initial commit 19 May 2020, 21:06:09 UTC
77d1587 Initial commit 19 May 2020, 21:05:51 UTC
37794f4 Initial Commit 19 May 2020, 21:05:28 UTC
4b1e242 Cleaned up 19 May 2020, 21:05:20 UTC
75a11b5 Update generating_potential_connectivity.m 18 May 2020, 03:12:54 UTC
9a5aef0 newer neuron lists 17 May 2020, 22:36:35 UTC
bda2a6e Added ability to change the soma color. 06 May 2020, 19:57:02 UTC
622d7fa Update .gitignore 06 May 2020, 19:45:20 UTC
0ac8bae Updates 06 May 2020, 19:43:27 UTC
6703735 Delete filling_fraction.m~ 06 May 2020, 19:43:07 UTC
77ea560 Parameter for choosing among multiple density measurements. 06 May 2020, 19:42:55 UTC
0bf9b9e Initial Commit 04 May 2020, 03:57:14 UTC
d53f399 Initial Commit 04 May 2020, 03:56:57 UTC
4b14bb6 Works with pre and post 04 May 2020, 03:56:34 UTC
89224fa Works with pre and post now 04 May 2020, 03:56:15 UTC
176ba0f Reorganized 25 April 2020, 20:08:41 UTC
d6b9d33 Updated for new neuron list 25 April 2020, 20:06:09 UTC
c43b99b Removed redundancies 25 April 2020, 20:06:00 UTC
b04f51b added ignored files 25 April 2020, 20:05:43 UTC
94f92d0 Unused 24 April 2020, 23:50:53 UTC
3fd102a Removed redundant parsing 24 April 2020, 23:50:40 UTC
515debc Create .gitignore 24 April 2020, 23:50:13 UTC
e608706 Updated for new meshes 21 April 2020, 18:16:26 UTC
5e77ddd Updated for use with new meshes 21 April 2020, 18:11:02 UTC
6db8230 Initial Commit 21 April 2020, 17:37:43 UTC
aee078d Initial Commit 20 April 2020, 15:40:13 UTC
b08716f Initial commit 09 April 2020, 23:21:26 UTC
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