| 4617a6f | Ian Harry | 16 November 2019, 08:55:08 UTC | Prepare for release (#3007) | 16 November 2019, 08:55:08 UTC |
| 2f1f30d | Ian Harry | 15 November 2019, 15:27:45 UTC | Add maximum SNR option for injection minifollowups (#3005) * Add maximum SNR option * Changes in response to Tom * Remove duplicate code | 15 November 2019, 15:27:45 UTC |
| 6aade84 | Tito Dal Canton | 10 November 2019, 16:48:44 UTC | PyCBC Live: misc improvements (#3003) * Make sure low-frequency cutoff is consistent with all templates * Improve GraceDB plots * Show GraceDB ping response * Shorten a very common log messange * Fix error | 10 November 2019, 16:48:44 UTC |
| 4a39093 | Josh Willis | 10 November 2019, 16:16:21 UTC | Swap out Singularity for PyInstaller bundles in search workflow… (#3004) | 10 November 2019, 16:16:21 UTC |
| b768c08 | Gareth Davies | 08 November 2019, 13:53:40 UTC | qscans not working for fake data (#3002) * qscans not working for fake data This input argument is needed for creation of fake strain, but is not included when running `pycbc.strain.insert_strain_option_group(parser)` The other place this strain creation/argument is used is in pycbc_inspiral, which uses the input argument in other places. This change should not affect normal running * Update help message previous was specific to pycbc_inspiral | 08 November 2019, 13:53:40 UTC |
| 13ea76c | Josh Willis | 07 November 2019, 17:46:05 UTC | Add OSG tools to docker container (#3000) * Add globus tools (from osg-wn-client) to Docker container * Ensure ld.so.cache is up-to-date in docker container * Do not rely on LD_LIBRARY_PATH to locate libraries installed into container * Make files installed under /opt/pycbc in container readable by all | 07 November 2019, 17:46:05 UTC |
| 341f101 | Ian Harry | 07 November 2019, 10:54:21 UTC | Formatting changes to page_coincinfo (#2996) | 07 November 2019, 10:54:21 UTC |
| 6953ce6 | Ian Harry | 07 November 2019, 09:58:31 UTC | Allow output of oldformat files (for HL only) (#2997) | 07 November 2019, 09:58:31 UTC |
| 40f5319 | Tito Dal Canton | 07 November 2019, 09:38:46 UTC | PyCBC Live: fix errors from SNR optimization in Python 3 (#2993) * PyCBC Live: make sure SNR-opt HDF file is properly closed * Fix another Python 2-ism * Fix error from LIGOTimeGPS multiplication * Address Ian's comment / fix Codeclimate | 07 November 2019, 09:38:46 UTC |
| a48e2e1 | Tito Dal Canton | 06 November 2019, 09:13:56 UTC | Fix HDF5 deprecation warning and ensure files are closed (#2994) | 06 November 2019, 09:13:56 UTC |
| 1b3c369 | Ian Harry | 05 November 2019, 09:26:29 UTC | Fix python3-ism in 2991 (#2992) Fixes #2991 Not tested, but this should do the trick! | 05 November 2019, 09:26:29 UTC |
| b31fb69 | Thomas Dent | 04 November 2019, 13:54:22 UTC | add foreground ifar plot for multi-ifo pipeline (#2961) * add foreground ifar plot for multi-ifo pipeline * py3 print function * remove diagnostic non-py3 prints * allow code to have several input files read in Not sure if this does what we want with hierarchical removals, but then I wasn't sure before this change either. Since the code doesn't plot background any more the previous behaviour may be overkill. | 04 November 2019, 13:54:22 UTC |
| ec6b414 | Collin Capano | 04 November 2019, 13:53:05 UTC | updates to plot psd for inference files (#2982) | 04 November 2019, 13:53:05 UTC |
| c1efb58 | Leo Singer | 01 November 2019, 09:34:28 UTC | Fix Python 2ism in writing injection files (#2990) * Fix Python 2ism in writing injection files Fixes #2989. * Fix another Python 2ism | 01 November 2019, 09:34:28 UTC |
| 19275fa | Josh Willis | 31 October 2019, 15:49:20 UTC | Switch throughput templates-per-core to show harmonic mean (#2988) | 31 October 2019, 15:49:20 UTC |
| d607f48 | Ian Harry | 31 October 2019, 12:47:57 UTC | Optimize SNR time series in PyCBC Live (#2659) * First cut at optimizing SNR * Revert "First cut at optimizing SNR" This reverts commit 7adb8f8632835ed8383fcf3d3260b40eb9201b87. * Dump data for optimization * Move a bit of stuff around * Need this too * Need this * Move this * Another fix * This always takes so long! * Hopefully got it * Include IFAR * Edge-case fix * Adding optimize_snr to pycbc_live * Import subprocess * Apparently that is only for Windows * Full path for optimize_snr * Try this * Add logging * More verbosity * Need shell=True * Find explicit path * One more fix * Remove bit * Sigh * Final cleanup * Move output to log file * Two more fixes * Make comments prominent * Add some time limitation * Some more updates to pycbc_live * Make command line argument * Another "no triggers" bug fix * Dump a bit more information * Fill out information in gracedb * Fix bug * FIx bug * Whoops * Think that's it * Remove hardcoded GraceDB stuff and approximant * Fix imports * Also log original GID to GraceDB comment * Try to fix the params error * More attrs needed * More correct final message * Various fixes * Try to catch approximant failures gracefully * Enforce basic search space limits * Set χ² to None instead of 1 * Remove temporary directory on successful uploads * A hopeless attempt at avoiding future confusion about FARs * Fix two buggos * Ensure chisq is set, and increase timeout limits * Attempt to centralize SNR time series * Fix fup_ifo times | 31 October 2019, 12:47:57 UTC |
| f5bcaf8 | Tito Dal Canton | 30 October 2019, 16:49:20 UTC | PyCBC Live: fix str/bytes error related to PTA files on Python 3 (#2987) * PyCBC Live: fix error related to HDF5 files and str/bytes confusion The error shows up when trying to associate the PTA histogram files with the right combination of detectors. This change requires an update of the PTA histogram files. * Silence excessive verbosity * Remove unused import | 30 October 2019, 16:49:20 UTC |
| c01d074 | Collin Capano | 30 October 2019, 11:08:42 UTC | add log and exponent transforms (#2985) | 30 October 2019, 11:08:42 UTC |
| ce6c2eb | Gareth Davies | 25 October 2019, 17:48:02 UTC | Changes to perform downsampling after injections in fake data (#2981) * Changes to perform downsampling after injections in fake data * don't use 'ldas' resampling for Gaussian noise, PEP8 fixes * whitespace etc | 25 October 2019, 17:48:02 UTC |
| d2a6084 | Alex Nitz | 25 October 2019, 14:33:39 UTC | add the new phase time statistics and boiler plate for 2ogc / 2ogc bbh statistics (#2943) * add new phase state and 2gc related stats * remove debug line * more debug lines * cc * more cc * more cc * cleanup * fixes * cc * cc * more cc * more cc | 25 October 2019, 14:33:39 UTC |
| 6af9117 | Ian Harry | 24 October 2019, 17:42:08 UTC | Add psd var val to tables (#2978) * Add PSD var to tables * Make psd_var optional * Add psd_var in coincinfo * Move sngl table header into production codes * Addressing comments from Tom | 24 October 2019, 17:42:08 UTC |
| f7ce9e9 | Josh Willis | 23 October 2019, 21:35:06 UTC | Change CUDA chisq to use more accurate phase calculation (#2950) * Change CUDA chisq to use more accurate phase calculation * Try to silence some bogus pylint warnings * Shorten some lines to try to make pylint happy | 23 October 2019, 21:35:06 UTC |
| e163b7f | Gareth Davies | 21 October 2019, 16:16:56 UTC | add log-x option to plot_vt_ratio (#2977) * add in log-x option to plot_vt_ratio * put in log-y option (probably won't be needed so much), address tom's comments | 21 October 2019, 16:16:56 UTC |
| 8308b8f | Ian Harry | 21 October 2019, 14:42:54 UTC | Update setup.py (#2972) | 21 October 2019, 14:42:54 UTC |
| 6c28dac | Ian Harry | 11 October 2019, 20:00:10 UTC | Preparing for release (#2971) | 11 October 2019, 20:00:10 UTC |
| 84e8c92 | Tito Dal Canton | 09 October 2019, 17:04:14 UTC | Control injection f_ref and f_final from the command line (#2970) | 09 October 2019, 17:04:14 UTC |
| 4b3ff28 | veronica-villa | 08 October 2019, 12:54:12 UTC | Add mchirp_area codes (#2951) * Add mchirp_area codes * Update mchirp_plots.py * Update mass_area_plot.py * Update mchirp_plots.py * Update mass_area_plot.py * Update mchirp_area.py * Update mass_area_plot.py * Update mass_area_plot.py * Update mchirp_plots.py * Update mchirp_plots.py * Update mchirp_area.py * Update mass_area_plot.py * Update mass_area_plot.py * Update mass_area_plot.py * Update mass_area_plot.py * Update mchirp_area.py * Add docstring * Add docstrings and aliasing some modules * Solving codeclimate issues * Solving codeclimate issue * Rename mass_area_plot.py to mass_area_plot * Rename mass_area_plot to pycbc_mass_area_plot Also aliased some modules * Rename mchirp_plots.py as pycbc_mchirp_plots * Change equations spacing * Edit docstrings * Fixing Travis issues * Delete pycbc_mass_area_plot * Add pycbc_mass_area_plot * Change some imports * Delete pycbc_mchirp_plots * Add pycbc_mchirp_plots | 08 October 2019, 12:54:12 UTC |
| 3afe4a3 | Gareth Davies | 08 October 2019, 12:51:09 UTC | Add statmap causing some issues downstream (#2969) * explicitly set datatypes to solve int-as-float downstream problem * didnt rebase before editing file * sorting the fap * exclusive ifar/fap were not being dealt with - corrections to time removal * Fix FAP issue (inconsistent seconds/years in cin calculation) * few formatting/spacing fixes * linebreak syntax | 08 October 2019, 12:51:09 UTC |
| dc02a7e | Gareth Davies | 07 October 2019, 12:47:52 UTC | add injection_style checks to add statmap (#2968) * add injection_style checks to add statmap * move injection_style to global definition | 07 October 2019, 12:47:52 UTC |
| 763150e | Thomas Dent | 07 October 2019, 08:04:45 UTC | fix minor variable name bug (#2967) | 07 October 2019, 08:04:45 UTC |
| 3e3a0c1 | Bhooshan Uday Varsha Gadre | 04 October 2019, 13:04:08 UTC | Fix condition strain naming error (#2898) * Split the data info small frame files * Update README.md * Update README.md * Update README.md * Update README.md * Update README.md * Update pycbc_condition_strain * Assert frame-duration is positive integer * Update pycbc_make_psd_estimation_workflow same variable name `segments` used for function in `ligo` and loop `for ifo, segments in analyzable_segs.items():` producing error. * Update pycbc_condition_strain * Fixed accidental changes to README and psd_estimation * Fixed accidental changes to README and psd_estimation * Fix output short frames naming convention for the last file with correct duration. | 04 October 2019, 13:04:08 UTC |
| 1a8b7d2 | Alex Nitz | 03 October 2019, 15:10:42 UTC | update dtphase multiifo exe to work from multiple reference points, u… (#2941) * update dtphase multiifo exe to work from multiple reference points, update smoothing * update docs * update help * docstring, formatting, help msg etc also replace loop over enumerate ifos with zip | 03 October 2019, 15:10:42 UTC |
| 97dddf4 | Thomas Dent | 03 October 2019, 10:08:12 UTC | remove unused import, variables etc. (#2958) * remove unused import, variables etc. few cleanups on formatting, help msgs etc. * don't use 'key' as variable name * fix travis error (mismatched quotes) * close quotes | 03 October 2019, 10:08:12 UTC |
| d144de0 | Alex Nitz | 02 October 2019, 16:41:01 UTC | add sngl framework needed for psd rescaling (#2942) * add sngl framework needed for psd rescaling * cc * cc * address comments and cc * cc | 02 October 2019, 16:41:01 UTC |
| 75203fb | Gareth Davies | 02 October 2019, 10:03:25 UTC | Hierarchical removal multiifo (#2954) * adding HR functionality to add_statmap * output to foreground/background datasets, some simplification and commenting | 02 October 2019, 10:03:25 UTC |
| 6e81c78 | Gareth Davies | 30 September 2019, 18:21:28 UTC | Add pruning in to fit_sngls_split_binned (#2956) * Add pruning in to fit_sngls_split_binned * fix error whcih led to splits being repeated * Fix some logging, comment out currently unused calculations * formatting, more commenting * change style of bin edge spacing arguments to emulate fit_sngls_binned * minor edits, remove unused 'min duration' option | 30 September 2019, 18:21:28 UTC |
| 323fa36 | Thomas Dent | 30 September 2019, 13:32:25 UTC | few tweaks to multiifo workflow (#2952) * few tweaks to multiifo workflow * leave nicer layout of snrifar plots to another day | 30 September 2019, 13:32:25 UTC |
| cd2defd | Ian Harry | 24 September 2019, 15:25:23 UTC | Update gracedb upload script (#2953) * Updates to upload_xml_to_gracedb * One typo | 24 September 2019, 15:25:23 UTC |
| 2c8c837 | Sumit Kumar | 23 September 2019, 08:40:09 UTC | Bug fixed in posteriors from dynasty (#2947) * Normalized the weights obtained from dynesty samples such that they add up to 1 * Cleaning up to address code climate issues | 23 September 2019, 08:40:09 UTC |
| 904aef2 | Thomas Dent | 22 September 2019, 21:32:05 UTC | fix inj snrchisq plot (#2935) | 22 September 2019, 21:32:05 UTC |
| 34065fd | Josh Willis | 20 September 2019, 19:44:46 UTC | Do not 'yum update' when building RHEL virtualenv in Travis (#2949) | 20 September 2019, 19:44:46 UTC |
| d61a5b0 | Tito Dal Canton | 20 September 2019, 07:38:21 UTC | Restrict SSE 4.2 flag to x86_64 (#2936) | 20 September 2019, 07:38:21 UTC |
| bbccbd4 | Gareth Davies | 19 September 2019, 16:31:38 UTC | Injection and foreground minifollowups missing triggers/data (#2913) * changes to injection and foreground minifollowups to deal with missing triggers/data | 19 September 2019, 16:31:38 UTC |
| 68ebdea | Alex Nitz | 17 September 2019, 09:17:29 UTC | statmap fix (#2939) | 17 September 2019, 09:17:29 UTC |
| 631c5ec | Alex Nitz | 16 September 2019, 19:22:08 UTC | two ifo coinc should still pass ifos (#2940) | 16 September 2019, 19:22:08 UTC |
| 2c9ea63 | Collin Capano | 16 September 2019, 15:28:32 UTC | always create checkpoint file if it isn't valid (#2897) | 16 September 2019, 15:28:32 UTC |
| 268caae | Duncan Brown | 12 September 2019, 15:19:46 UTC | Use h5py 2.9.0 or less for PyCBC (#2928) | 12 September 2019, 15:19:46 UTC |
| 2949545 | Ian Harry | 11 September 2019, 21:19:33 UTC | Don't gen short injections when not needed (#2934) | 11 September 2019, 21:19:33 UTC |
| 4bac533 | Alex Nitz | 11 September 2019, 21:18:15 UTC | fix trigger id bug in mult find trigs (#2922) | 11 September 2019, 21:18:15 UTC |
| 2e2f2e2 | Thomas Dent | 11 September 2019, 16:19:40 UTC | fix to get new opt snr datasets (#2931) * fix to get new opt snr datasets * minor cleanup to inj minifollowup * minor fix to inj minifollowup | 11 September 2019, 16:19:40 UTC |
| 80d8c04 | Ian Harry | 11 September 2019, 16:03:07 UTC | Summary plots must use closed_box veto (#2932) | 11 September 2019, 16:03:07 UTC |
| f68cccb | Josh Willis | 09 September 2019, 21:51:22 UTC | Do not directly import FFTW in pycbc_inspiral; fix some broken function names (#2926) | 09 September 2019, 21:51:22 UTC |
| c1cfb1d | Paul Hopkins | 09 September 2019, 13:45:09 UTC | Add Cardiff ARCCA Hawk Cluster to MKL setup (#2918) | 09 September 2019, 13:45:09 UTC |
| eff6525 | Serguei Ossokine | 09 September 2019, 13:40:31 UTC | Make pycbc_generate_hwinj not ignore an option (#2925) Previously waveform_low_frequency_cutoff option was ignored when computing the SNR. This can be a problem for example for waveform approximants that need to start at an earlier frequency than what is used for SNR computation | 09 September 2019, 13:40:31 UTC |
| cd1ad2f | idorrington92 | 06 September 2019, 12:20:50 UTC | Fixed bug where reweighting by null SNR inadvertently made it so the null SNR was never below 4.5 (#2924) | 06 September 2019, 12:20:50 UTC |
| 155acbd | Alex Nitz | 06 September 2019, 08:41:38 UTC | add alternate pta maker script (#2904) * add alternate pta maker script | 06 September 2019, 08:41:38 UTC |
| 7673532 | Gareth Davies | 06 September 2019, 08:39:08 UTC | Remove exclude foreground from workflow if only one coincidence type (#2923) * don't perform exclude_zerolag if only using two IFOs | 06 September 2019, 08:39:08 UTC |
| 962f61f | Tito Dal Canton | 05 September 2019, 12:26:31 UTC | PyCBC Live: fix issue in how the detector state is reported (#2921) * PyCBC Live: fix issue in how the detector state is reported When (some of) the worker nodes think a detector is unusable, but the master node thinks the opposite, the detector is still reported as being active despite no triggers are produced from it. This patch ensures that the detector is reported as inactive when there are no (or partial) results from it. * Remove log info that shows up too often on stderr | 05 September 2019, 12:26:31 UTC |
| 4c0e4d1 | Marek Cieślar | 31 August 2019, 01:36:20 UTC | added casting to float (#2911) * added casting to float * Update detector.py * Update detector.py * Update detector.py | 31 August 2019, 01:36:20 UTC |
| 9334cf6 | Gareth Davies | 30 August 2019, 14:31:59 UTC | recalculation of exclusive IFAR/FAP in exclude_zerolag (#2910) * recalculation of exclusive IFAR/FAP in exclude_zerolag * adding in background_exc ifar calculation * reorder ifar calc, don't exclude zerolag from the input file | 30 August 2019, 14:31:59 UTC |
| e7935e6 | Collin Capano | 27 August 2019, 23:30:37 UTC | Patches for chiral EFT paper (#2908) * add transform to handle multiple eos * allow create_injections to work with transforms that take multiple inputs * fix bug in file name parsing * silence loading eos * add ability to use constraints when plotting | 27 August 2019, 23:30:37 UTC |
| ddfda36 | Gabriel Bonilla | 27 August 2019, 17:38:12 UTC | Fix typo in inference documentation (#2907) | 27 August 2019, 17:38:12 UTC |
| b3e6987 | Thomas Dent | 26 August 2019, 16:48:33 UTC | fix fg mf for multi-ifo case (#2902) | 26 August 2019, 16:48:33 UTC |
| f18a18b | Soumi De | 26 August 2019, 16:46:29 UTC | Use different seeds for different detectors in BBH example (#2905) | 26 August 2019, 16:46:29 UTC |
| 563f496 | Ian Harry | 19 August 2019, 13:56:40 UTC | Optimize the PSD variation statistic (#2890) * Use scipy to optimize variation interpolation * Fix issue with PSD var interp * Silence most of codeclimate * Fix PSD variation caching * Numerous typos | 19 August 2019, 13:56:40 UTC |
| d0ed0fd | Ian Harry | 19 August 2019, 13:56:19 UTC | Re-add missing line (#2900) | 19 August 2019, 13:56:19 UTC |
| bf9e5ac | Ian Harry | 19 August 2019, 10:47:09 UTC | Background minifollowups (#2864) * Enable background followups (testing * Keep working on background mfups * Adding html snippet for skipped events in bground * Enable skipping duplicate triggers * Send tags through to mfups!! * Pass tags along * Try to fix * Syntax error fixes * So many bugs!! * BG doesn't have all the FAPs * Must return node * Do this right * Add quotes * Need quotes here too * Tags are not files * Turn on the skip jobs * Another bugfix * Use times when skipping triggers * Bug fix * CodeClimate commands * Only make open-box plots if specifically asked to! * Default to exclusive * Also tag FG minifups * Typo fix | 19 August 2019, 10:47:09 UTC |
| cbfe013 | Alex Nitz | 19 August 2019, 10:45:23 UTC | add Ian's autogating iterability feature, add command line option to … (#2899) * add Ian's autogating iterability feature, add command line option to invoke, store gating info * fixes | 19 August 2019, 10:45:22 UTC |
| 91ce41c | Thomas Dent | 15 August 2019, 22:31:45 UTC | add 2-ifo phase/time/amp consistency to coinc rate stat (#2830) * first cut at coinc rate stat with p/t/a * stat: combine background rate with p/t/a for HL * allow verbosity in stat calc * add statmap PEP8 * stat formatting and 3ifo p/t/a * plumbing to pass ifo information to p/t/a stat * second attempt at feeding through ifo info * more rewrites for multiifo p/t/a * coinc findtrigs formatting * multiifo findtrigs towards pta * multiifo p/t/a, first testing version * multiifo p/t/a bug fix and more messages * multiifo p/t/a more fixes * multiifo p/t/a bugfix * initialization of stat classes * put lower floor on stat value | 15 August 2019, 22:31:45 UTC |
| bc1a2f6 | Alex Nitz | 15 August 2019, 14:35:09 UTC | add hook to allow getting waveforms from external libraries to pycbc (#2826) * add hook to pull in external waveforms climate update interface * Update waveform.py | 15 August 2019, 14:35:09 UTC |
| 9d4e562 | Alex Nitz | 14 August 2019, 18:49:13 UTC | fix error in dict array init logic (#2892) | 14 August 2019, 18:49:13 UTC |
| 4c0acda | Tito Dal Canton | 14 August 2019, 16:14:15 UTC | Fix bug in PyCBC Live autogating (#2891) | 14 August 2019, 16:14:15 UTC |
| 5b00abf | Tito Dal Canton | 14 August 2019, 14:38:24 UTC | Fix URL to lscsoft RPM (#2895) | 14 August 2019, 14:38:24 UTC |
| 0971d53 | Ian Harry | 12 August 2019, 22:10:35 UTC | Add new cuts to cut out parts of the tmpltbank (#2874) | 12 August 2019, 22:10:35 UTC |
| ff83c82 | Tito Dal Canton | 09 August 2019, 12:05:52 UTC | PyCBC Live autogating fixes (#2889) Record autogates into output files Make autogating options consistent with offline search Minor fixes | 09 August 2019, 12:05:52 UTC |
| d4c615d | Miriam Cabero | 04 August 2019, 10:21:06 UTC | Inference warning when parameter repeated (#2888) * Inference warning when parameter repeated * Codeclimate trailing whitespace | 04 August 2019, 10:21:06 UTC |
| 3e34c9f | Gareth Davies | 02 August 2019, 15:45:07 UTC | add_statmap fap calculation (#2884) * time not being converted between years and seconds | 02 August 2019, 15:45:07 UTC |
| 2749ad5 | Gareth Davies | 02 August 2019, 10:12:03 UTC | Exclude zerolag not dealing with DictArray properly (#2881) * sort issue with all_trigs assignment | 02 August 2019, 10:12:03 UTC |
| dde74db | Gareth Davies | 02 August 2019, 09:56:44 UTC | Tag empty string removal (#2880) * fix to ensure empty string isnt read as a tag * add warning about empty string tags | 02 August 2019, 09:56:44 UTC |
| b141c7f | Gareth Davies | 01 August 2019, 13:10:24 UTC | add in pycbc_multiifo_exclude_zerolag executable (#2872) * add in pycbc_multiifo_exclude_zerolag executable * adding exclude_zerolag into workflow * sanitisation in remove and select | 01 August 2019, 13:10:24 UTC |
| 64325ad | Thomas Dent | 31 July 2019, 14:56:18 UTC | properly do try except ... (#2878) | 31 July 2019, 14:56:18 UTC |
| 934c82b | Gareth Davies | 31 July 2019, 12:24:36 UTC | rename table function and table module to prevent clashes (#2877) | 31 July 2019, 12:24:36 UTC |
| 4bc257a | Tito Dal Canton | 31 July 2019, 11:57:00 UTC | Various fixes to pycbc_plot_qscan (#2875) * More CLI help * Add reference to Q-transform * Fix bug preventing single time window plots * Enable choosing colormap | 31 July 2019, 11:57:00 UTC |
| 36beaeb | Thomas Dent | 31 July 2019, 10:27:53 UTC | proofing plotting, followup etc against absence of injection inclusive IFAR (#2851) | 31 July 2019, 10:27:53 UTC |
| 6d3b885 | Collin Capano | 30 July 2019, 16:15:12 UTC | fix invcdf in Gaussian distribution; also add cdf function (#2873) | 30 July 2019, 16:15:12 UTC |
| 4330148 | Liting Xiao | 30 July 2019, 10:06:00 UTC | Adding autogating to PyCBC Live (#2627) * Add autogating to PyCBC Live * Change autogating-threshold default to None * Remove redundant default assignment * Get rid of filter ringings in autogating in live * Report which detector is being autogated * Remove excessive verbosity from detect_loud_glitches() * Woops, forgot one * No need to downsample | 30 July 2019, 10:06:00 UTC |
| effcf09 | David Keitel | 29 July 2019, 15:18:35 UTC | add verbose flag to inference workflow_config.ini example (#2871) can be quite useful especially for new users who start by copying the example files | 29 July 2019, 15:18:35 UTC |
| 2aa4f6a | Ian Harry | 28 July 2019, 16:07:31 UTC | Add code to write html snippet (#2863) * Add small script to write html * Import sys * Update pycbc_create_html_snippet | 28 July 2019, 16:07:31 UTC |
| d540ce2 | Ian Harry | 28 July 2019, 16:05:46 UTC | Fix chisq threhsold (#2862) | 28 July 2019, 16:05:46 UTC |
| 390ad5d | Ian Harry | 28 July 2019, 16:04:09 UTC | Turn integrity checking off (#2866) | 28 July 2019, 16:04:09 UTC |
| 54354c5 | Ian Harry | 28 July 2019, 16:02:41 UTC | Change label to horizontal in psd (#2867) | 28 July 2019, 16:02:41 UTC |
| e163dc9 | Sumit Kumar | 28 July 2019, 11:33:29 UTC | Adding support for dynesty sampler. (#2832) * Adding support for dynesty sampler * Updated requirement.txt * Fixed some bugs in DynestySampler class * Updated posterior samples are weighted by weight factor * WIP: adding pool option to dynesty sampler * Added option for creating pool * WIP: Fixing posterior samples * Added option for loglr function while running sampler * Fixed posterior samples from dynesty sampler * Cleaning up dynesty.py file * some more cleaning and arrangement * Removed duplicate pices of code in inference/io and clean up * Cleaning up of code * Fixed bug in inference/io nested sampling classes * Some cleaning up and fixed a bug in dlogz value * Cleaning up of code (issues raise by code climate) * Adding support for sampling-transform in dynesty sampler * Fixed a bug with writing variable params instead of sampling params * Revert back changes made for sampling transform. Will be done in future commits. * Cleaning up * Cleaning up the code | 28 July 2019, 11:33:29 UTC |
| 46b9203 | Ian Harry | 26 July 2019, 09:28:35 UTC | Allow fallback in edge case (#2868) | 26 July 2019, 09:28:35 UTC |
| 61d64e6 | David Keitel | 26 July 2019, 08:11:11 UTC | pycbc_make_inference_workflow: optional file-path options (#2855) -normally, users shouldn't need to worry about filenames of --output-map, --transformation-catalog and --output-file -will be put in default --output-dir with default names automatically -but can still be manually set if required -closes #2739 | 26 July 2019, 08:11:11 UTC |
| 3e8ad95 | Gareth Davies | 25 July 2019, 07:24:35 UTC | Sensitivity plots fix (#2860) * fix immediately obvious bug in plotting loop * add in allinj plots, create front summary page * move allinj to after injection plots loop * Fix to make bank_plot work. Include found table in injection pages * Use censored veto, clarify fixme comments * add snrifar summary to main page * remove confusing and unneccessary bit * found table doesnt work * fix up one thing which turned into a list although it's only a list with 1 entry * add Gareth | 25 July 2019, 07:24:35 UTC |
| 6514370 | Alex Nitz | 24 July 2019, 14:09:48 UTC | allow dt to be close for time series operations (#2819) * allow dt to be close for time series operations * fixes * add both fuzzy and sample off by one tests | 24 July 2019, 14:09:48 UTC |
| e203776 | Sumit Kumar | 24 July 2019, 12:20:33 UTC | Adding support for running CPNest sampler with logllikelihood ratio (#2859) * Adding support for running sampler with loglr * Cleaned up file with unnecessary comments/residual statements * Cleaning up of file | 24 July 2019, 12:20:33 UTC |
| 639c3ea | Gareth Davies | 23 July 2019, 18:39:41 UTC | add in sigma variation into statistic (#2850) * add in sigma variation into statistic * better commenting/explanations. variables named as what they are. clarification of calculations by splitting * leave ExpFitStatistic alone * leave PhaseTDExpFitStatistic alone * additional comments * minor tweaks to comments | 23 July 2019, 18:39:41 UTC |
| 7606c4a | JulianWesterweck | 22 July 2019, 14:34:01 UTC | Fixes bug: variable not set when no injections file is given. (#2840) | 22 July 2019, 14:34:01 UTC |
| 9117972 | Thomas Dent | 19 July 2019, 17:01:22 UTC | slightly bump size of symbols (#2849) | 19 July 2019, 17:01:22 UTC |
