Revision 48270681afc13081094f7f398a1e194c6b07ba9b authored by vdutor on 03 January 2018, 17:44:53 UTC, committed by Mark van der Wilk on 03 January 2018, 17:44:53 UTC
* Outline of new expectations code. * Quadrature code now uses TensorFlow shape inference. * General expectations work. * Expectations RBF kern, not tested * Add Identity mean function * General unittests for Expectations * Add multipledispatch package to travis * Update tests_expectations * Expectations of mean functions * Mean function uncertain conditional * Uncertain conditional with mean_function. Tested. * Support for Add and Prod kernels and quadrature fallback decorator * Refactor expectations unittests * Psi stats Linear kernel * Split expectations in different files * Expectation Linear kernel and Linear mean function * Remove None's from expectations api * Removed old ekernels framework * Add multipledispatch to setup file * Work on PR feedback, not finished * Addressed PR feedback * Support for pairwise xKxz * Enable expectations unittests * Renamed `TimeseriesGaussian` to `MarkovGaussian` and added tests. * Rename some variable, plus note for later test of <x Kxz>_q. * Update conditionals.py Add comment * Change order of inputs to (feat, kern) * Stef/expectations (#601) * adding gaussmarkov quad * don't override the markvogaussian in the quadrature * can't test * adding external test * quadrature code done and works for MarkovGauss * MarkovGaussian with quad implemented. All tests pass * Shape comments. * Removed superfluous autoflow functions for kernel expectations * Update kernels.py * Update quadrature.py
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run_tests.sh
#!/bin/bash
# Script for running GPflow tests in sequential and parallel modes.
# Running tensorflow based tests in distinct processes prevents
# bad memory accumulations which can lead to crashes or slow runs
# on resource limited hardware.
# Written by Artem Artemev, 06/08/2017
set -e
mode=${1:-"--sequential"}
case "$mode" in
-p|--parallel)
numproc=$([[ $(uname) == 'Darwin' ]] && sysctl -n hw.physicalcpu_max || nproc)
echo ">>> Parallel mode. Number of processes = $numproc"
echo testing/test_*.py | xargs -n 1 -P "$numproc" bash -c 'nosetests -v --nologcapture $0 || exit 255'
;;
-s|--sequential)
for test_file in testing/test_*.py; do
echo ">>> Run $test_file"
nosetests -v --nologcapture "$test_file"
rc=$?
if [ "$rc" != "0" ]; then
echo ">>> $test_file failed"
exit $rc
fi
done
;;
*)
;;
esac
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