4a15865 | Hamid Mohamadi | 17 August 2017, 16:38:47 UTC | Delete COPYRIGHT | 17 August 2017, 16:38:47 UTC |
73dba86 | mohamadi | 17 August 2017, 16:37:52 UTC | Changing license from GPLv3 to MIT License | 17 August 2017, 16:37:52 UTC |
1cf3557 | mohamadi | 09 August 2017, 17:56:41 UTC | Checking user set required -k parameter | 09 August 2017, 17:56:41 UTC |
e694ac8 | mohamadi | 25 July 2017, 09:24:24 UTC | nthash.hpp: improving rotate ops | 25 July 2017, 09:24:24 UTC |
c5a5fb2 | mohamadi | 28 April 2017, 16:21:33 UTC | updated citation | 28 April 2017, 16:21:33 UTC |
7132d77 | mohamadi | 20 April 2017, 23:57:33 UTC | ntcard.cpp: fixing the bug to pass more than 15 k values | 20 April 2017, 23:57:33 UTC |
f50f8d1 | mohamadi | 31 March 2017, 17:10:03 UTC | nthash.hpp: formatted | 31 March 2017, 17:10:03 UTC |
ea75b66 | mohamadi | 29 March 2017, 18:52:30 UTC | nthll, ntcard: remove extra line | 29 March 2017, 18:52:30 UTC |
ff76406 | mohamadi | 29 March 2017, 18:48:43 UTC | ntcard.cpp: set --cov to 65535 | 29 March 2017, 18:48:43 UTC |
a3cc209 | Hamid Mohamadi | 26 February 2017, 19:16:02 UTC | Update README: specify prefix for output file | 26 February 2017, 19:16:02 UTC |
a361732 | mohamadi | 26 February 2017, 19:06:06 UTC | Added feature: specify prefix for output histogram files | 26 February 2017, 19:06:06 UTC |
15ce07e | Hamid Mohamadi | 02 February 2017, 22:39:42 UTC | Update configure.ac | 02 February 2017, 22:39:42 UTC |
c7e9f88 | mohamadi | 02 February 2017, 19:21:58 UTC | Make -O3 defualt in configure.ac | 02 February 2017, 19:21:58 UTC |
73c2f3a | mohamadi | 31 January 2017, 22:43:28 UTC | Added inline to all functions | 31 January 2017, 22:43:28 UTC |
3d1b07b | mohamadi | 19 January 2017, 01:05:25 UTC | Makefile.am: included StringUtil.h | 19 January 2017, 01:05:25 UTC |
dd1b886 | Hamid Mohamadi | 11 January 2017, 22:17:17 UTC | Update README.md | 11 January 2017, 22:17:17 UTC |
de4252d | Hamid Mohamadi | 11 January 2017, 21:01:42 UTC | Update README.md | 11 January 2017, 21:01:42 UTC |
86d28c1 | Hamid Mohamadi | 11 January 2017, 20:56:14 UTC | Update README.md | 11 January 2017, 20:56:14 UTC |
88f0622 | mohamadi | 11 January 2017, 20:49:53 UTC | Autotools version | 11 January 2017, 20:49:53 UTC |
7eda6f8 | Hamid Mohamadi | 08 January 2017, 19:16:36 UTC | Update README.md | 08 January 2017, 19:16:36 UTC |
9a328dc | Hamid Mohamadi | 22 December 2016, 20:40:56 UTC | Update README.md | 22 December 2016, 20:40:56 UTC |
38d21c1 | mohamadi | 22 December 2016, 20:32:26 UTC | made code C++14 friendly | 22 December 2016, 20:32:26 UTC |
8be737f | mohamadi | 22 December 2016, 20:20:30 UTC | Added multiple k option | 22 December 2016, 20:20:30 UTC |
1789808 | Hamid Mohamadi | 06 December 2016, 20:45:38 UTC | Update README.md | 06 December 2016, 20:45:38 UTC |
189c34c | Hamid Mohamadi | 06 December 2016, 20:22:17 UTC | Update README.md | 06 December 2016, 20:22:17 UTC |
83319cd | mohamadi | 04 November 2016, 23:29:45 UTC | Added COPYRIGHT | 04 November 2016, 23:29:45 UTC |
2ff88f3 | Hamid Mohamadi | 04 November 2016, 17:10:37 UTC | Update LICENSE | 04 November 2016, 17:10:37 UTC |
1057d5e | Hamid Mohamadi | 03 November 2016, 21:21:14 UTC | Delete COPYRIGHT | 03 November 2016, 21:21:14 UTC |
feb151e | Hamid Mohamadi | 03 November 2016, 20:52:23 UTC | Update README.md | 03 November 2016, 20:52:23 UTC |
d6a5b67 | Hamid Mohamadi | 03 November 2016, 18:59:36 UTC | Update LICENSE | 03 November 2016, 18:59:36 UTC |
30b0cbc | Hamid Mohamadi | 03 November 2016, 18:14:11 UTC | Update LICENSE | 03 November 2016, 18:14:11 UTC |
14cf1e8 | Hamid Mohamadi | 03 November 2016, 18:12:53 UTC | Update LICENSE | 03 November 2016, 18:12:53 UTC |
f37ff6d | Hamid Mohamadi | 03 November 2016, 17:42:54 UTC | Update LICENSE | 03 November 2016, 17:42:54 UTC |
0931eda | Hamid Mohamadi | 31 October 2016, 23:19:47 UTC | Update README.md | 31 October 2016, 23:19:47 UTC |
cd43ba8 | Hamid Mohamadi | 31 October 2016, 23:18:18 UTC | Update README.md | 31 October 2016, 23:18:18 UTC |
434dcb7 | Hamid Mohamadi | 31 October 2016, 20:40:58 UTC | Update README.md | 31 October 2016, 20:40:58 UTC |
76cef0a | Hamid Mohamadi | 31 October 2016, 20:31:41 UTC | Update README.md | 31 October 2016, 20:31:41 UTC |
53d67d7 | Hamid Mohamadi | 31 October 2016, 20:27:08 UTC | Update README.md | 31 October 2016, 20:27:08 UTC |
5cfb4bc | mohamadi | 31 October 2016, 20:13:01 UTC | Adding GPL-3 License | 31 October 2016, 20:13:01 UTC |
65a2cd7 | mohamadi | 31 October 2016, 20:03:02 UTC | Submitted version | 31 October 2016, 20:03:02 UTC |
9c199bd | mohamadi | 20 July 2016, 17:55:50 UTC | nthash handles k-mers with nonACGT | 20 July 2016, 17:55:50 UTC |
97dc3b2 | mohamadi | 19 July 2016, 17:52:26 UTC | nthist: accepting bam, sam, gz, bz, fasta, fastq format | 19 July 2016, 17:52:26 UTC |
5409a93 | mohamadi | 16 July 2016, 19:12:44 UTC | nonACGT resolved | 16 July 2016, 19:12:44 UTC |
ce1b6ee | mohamadi | 09 July 2016, 17:58:29 UTC | nthist first version | 09 July 2016, 17:58:29 UTC |
34a6dd0 | mohamadi | 21 June 2016, 00:35:26 UTC | Makefile:added ntcardm | 21 June 2016, 00:35:26 UTC |
2257e55 | mohamadi | 21 June 2016, 00:10:17 UTC | ntcardm.cpp: multi k-value ntcard added | 21 June 2016, 00:10:17 UTC |
bcd0f86 | mohamadi | 20 June 2016, 16:38:32 UTC | estComp added | 20 June 2016, 16:38:32 UTC |
6569665 | mohamadi | 20 June 2016, 16:08:55 UTC | ntcard.cpp: formatted | 20 June 2016, 16:08:55 UTC |
6d9fc33 | mohamadi | 20 June 2016, 16:06:33 UTC | ntcard.cpp: f1 computation added | 20 June 2016, 16:06:33 UTC |
fa9c5c1 | mohamadi | 17 June 2016, 21:29:46 UTC | Merge branch 'master' of github.com:bcgsc/ntCard | 17 June 2016, 21:29:46 UTC |
9074963 | mohamadi | 16 June 2016, 21:45:45 UTC | First Parallel Version: Data Parallelism | 16 June 2016, 21:45:45 UTC |
72ba3bf | Golnaz Jahesh | 16 June 2016, 02:44:13 UTC | Revert "Kmer count comparison of kmc-abyss" This reverts commit 53f1a9d5713d36a1463e2a3bcc26915ec6777ab1. | 16 June 2016, 02:44:13 UTC |
53f1a9d | Golnaz Jahesh | 16 June 2016, 02:33:37 UTC | Kmer count comparison of kmc-abyss | 16 June 2016, 02:33:37 UTC |
8272d1e | mohamadi | 08 June 2016, 01:48:25 UTC | Checking seqLen>= kmerLen | 08 June 2016, 01:48:25 UTC |
a4049ad | mohamadi | 08 June 2016, 01:15:07 UTC | formatted ntcard.cpp | 08 June 2016, 01:15:07 UTC |
e1c6b46 | mohamadi | 08 June 2016, 01:13:39 UTC | reading BAM and gzip files | 08 June 2016, 01:13:39 UTC |
0c918c6 | mohamadi | 07 June 2016, 18:21:37 UTC | FastaReader added | 07 June 2016, 18:21:37 UTC |
ce5fa36 | Hamid Mohamadi | 03 June 2016, 22:31:35 UTC | Update ntcard.cpp | 03 June 2016, 22:31:35 UTC |
44360a0 | Hamid Mohamadi | 03 June 2016, 22:20:24 UTC | Update ntcard.cpp | 03 June 2016, 22:20:24 UTC |
f90e292 | Hamid Mohamadi | 03 June 2016, 22:20:07 UTC | Update ntcard.cpp | 03 June 2016, 22:20:07 UTC |
f97b25e | mohamadi | 03 June 2016, 22:17:51 UTC | Reading from fasta file, gz file, and estimating canonical form added | 03 June 2016, 22:17:51 UTC |
37d1c3c | mohamadi | 03 June 2016, 19:08:03 UTC | Multiple file option added | 03 June 2016, 19:08:03 UTC |
1f31930 | mohamadi | 03 June 2016, 18:57:03 UTC | Initial parallel version | 03 June 2016, 18:57:03 UTC |
2241563 | mohamadi | 02 June 2016, 23:35:38 UTC | Parameter tuning | 02 June 2016, 23:35:38 UTC |
cf5dbd9 | mohamadi | 02 June 2016, 23:31:47 UTC | Parameter tuning | 02 June 2016, 23:31:47 UTC |
37db140 | mohamadi | 02 June 2016, 16:05:59 UTC | bfcard added | 02 June 2016, 16:05:59 UTC |
52cd119 | mohamadi | 02 June 2016, 16:05:24 UTC | ntcard first working version | 02 June 2016, 16:05:24 UTC |
738359f | mohamadi | 31 May 2016, 18:27:04 UTC | ntcard.cpp: initial commit | 31 May 2016, 18:27:04 UTC |
8814ba8 | mohamadi | 30 May 2016, 23:27:43 UTC | Adding test folder | 30 May 2016, 23:27:43 UTC |
fcbc7f6 | mohamadi | 30 May 2016, 23:21:47 UTC | ntcard.cpp: style fixed | 30 May 2016, 23:21:47 UTC |
cb82ceb | mohamadi | 30 May 2016, 23:17:53 UTC | ntcard.cpp: initial commit | 30 May 2016, 23:17:53 UTC |
3ad0ba7 | Hamid Mohamadi | 30 May 2016, 23:15:43 UTC | Initial commit | 30 May 2016, 23:15:43 UTC |