https://github.com/genome/genome
This is based on `gmt validation process-somatic-validation`, but located for future inclusion in the SomaticValidation pipeline itself.
- HEAD
- refs/for/master
- refs/heads/chrisamiller-patch-1
- refs/heads/cle
- refs/heads/cle-snapshot
- refs/heads/cle-staging
- refs/heads/cram
- refs/heads/cwltool-path
- refs/heads/gms-pub
- refs/heads/gms-pub-2015.02.22
- refs/heads/gms-pub-2015.03.04
- refs/heads/gms-pub-before-plos-merge-from-master
- refs/heads/gotcloud
- refs/heads/master
- refs/heads/mcallawa_trusty
- refs/heads/model-tests
- refs/heads/model-tests-for-lsf9
- refs/heads/perl-tests
- refs/heads/revert-606-gmt_picard_typos
- refs/heads/snapshot
- refs/tags/AP-103
- refs/tags/genome-3177
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First version of new command to process validation variants for review.
File | Mode | Size |
---|---|---|
alignment_summary @ 8932081 | ||
bam-readcount @ c044123 | ||
bassovac @ 41b7bc4 | ||
bin | ||
breakdancer @ dc68779 | ||
cron @ 9bb5f1f | ||
fqgrep @ fe0206d | ||
genome-db-cosmic @ bdec904 | ||
genome-db-omim @ d9b949a | ||
genome-db-pfam @ e5acfb0 | ||
genome-music | ||
genome-music-testdata @ 860ea75 | ||
genome-snapshot-deps @ e8f3564 | ||
genome-snapshot-testdata @ 72c0ded | ||
genome-sys-user | ||
genome-webserver | ||
genome-www | ||
getopt-complete @ 4094a60 | ||
gmt-sys-vmbuilder | ||
graphite @ 11f39fe | ||
init | ||
jenkins @ 07c935a | ||
joinx @ e83e763 | ||
lib | ||
pairoscope @ 91c203a | ||
scripts | ||
sff2fastq @ b815f97 | ||
somatic-sniper @ d736546 | ||
tgi-etc @ 08ba1a6 | ||
tigra @ 6fe6b74 | ||
tigra-sv @ 715dda8 | ||
ur @ bb913e1 | ||
varscan @ 83ae9d8 | ||
vendor | ||
workflow @ 301757e | ||
.gitignore | -rw-r--r-- | 67 bytes |
.gitmodules | -rw-r--r-- | 7.8 KB |
LICENSE | -rw-r--r-- | 7.5 KB |
README | -rw-r--r-- | 154 bytes |
WHERE_TO_PUT_CODE | -rw-r--r-- | 2.4 KB |
create-c-project.sh | -rwxr-xr-x | 2.9 KB |
create-project | -rwxr-xr-x | 2.9 KB |
test-data-relocate-me | l--------- | 46 bytes |
Computing file changes ...