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https://github.com/lmrodriguezr/nonpareil
06 April 2024, 01:07:49 UTC
Revision 4e304a692c6c07727ecaeddc3cba00c65561d623 authored by Luis M Rodriguez-R on 27 November 2013, 19:40:21 UTC, committed by Luis M Rodriguez-R on 27 November 2013, 19:40:21 UTC 
Path bug fix and new returnModel* in Nonpareil.R
 
A bug was causing unexpected temporal files to be created, and
unexpected errors for some input paths. Also, returnModelParameters and
returnModelValues were added to Nonpareil.R
1 parent 0e95e22
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Tip revision: 4e304a692c6c07727ecaeddc3cba00c65561d623 authored by Luis M Rodriguez-R on 27 November 2013, 19:40:21 UTC
Path bug fix and new returnModel* in Nonpareil.R
Tip revision: 4e304a6
Makefile 

gpp=g++
enveomics=enveomics/
universal=$(enveomics)universal.o
sqlite=$(enveomics)sqlite.o -lsqlite3
regex=$(enveomics)regex.o
go=$(enveomics)go.o $(regex) $(sqlite)
sequence=$(enveomics)sequence.o
pthread=-lpthread


all:	enveomics nonpareil

enveomics:
	cd $(enveomics) && $(MAKE) all

nonpareil:
	cd $(enveomics) && $(MAKE) nonpareil
	$(gpp) nonpareil.cpp $(universal) $(sequence) $(pthread) $(enveomics)nonpareil_mating.o $(enveomics)nonpareil_sampling.o -o nonpareil

nuc_sampler:
	cd $(enveomics) && $(MAKE) sequence
	$(gpp) nuc_sampler.cpp $(universal) $(sequence) $(pthread) -o utils/nuc_sampler
	
clean:
	cd $(enveomics) && $(MAKE) clean
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