4e40d28 | bernard-kim | 08 July 2021, 04:18:43 UTC | deleted copy | 08 July 2021, 04:18:43 UTC |
4028383 | bernard-kim | 07 July 2021, 23:06:29 UTC | updated README w/genome status change | 07 July 2021, 23:06:29 UTC |
653bfbc | Bernard Kim | 07 July 2021, 23:02:27 UTC | Merge pull request #1 from flyseq/revupdate Cleanup of scripts, code, and updates for paper revision | 07 July 2021, 23:02:27 UTC |
d64f3cf | bernard-kim | 07 July 2021, 23:01:20 UTC | updated data section | 07 July 2021, 23:01:20 UTC |
b027465 | bernard-kim | 07 July 2021, 22:12:46 UTC | started adding data details | 07 July 2021, 22:12:46 UTC |
0836581 | bernard-kim | 07 July 2021, 21:48:12 UTC | added and organized data files | 07 July 2021, 21:48:12 UTC |
dd4c230 | bernard-kim | 07 July 2021, 07:37:19 UTC | grouped inputs and outputs | 07 July 2021, 07:37:19 UTC |
2a76b79 | bernard-kim | 07 July 2021, 07:32:54 UTC | small typo | 07 July 2021, 07:32:54 UTC |
cc994f4 | bernard-kim | 07 July 2021, 07:32:24 UTC | cleaned up variant calling scripts | 07 July 2021, 07:32:24 UTC |
fd72b69 | bernard-kim | 07 July 2021, 03:32:16 UTC | updated quality score assessment code | 07 July 2021, 03:32:16 UTC |
85c1b55 | bernard-kim | 07 July 2021, 01:17:50 UTC | added file deletions | 07 July 2021, 01:17:50 UTC |
0720741 | bernard-kim | 07 July 2021, 01:15:10 UTC | updated genome size estimation | 07 July 2021, 01:15:10 UTC |
deb594a | bernard-kim | 06 July 2021, 23:43:43 UTC | more updates to decontamination and repeat masking parts of the pipeline | 06 July 2021, 23:43:43 UTC |
a2231c7 | bernard-kim | 06 July 2021, 07:51:49 UTC | more script cleanup | 06 July 2021, 07:51:49 UTC |
420ff3a | bernard-kim | 06 July 2021, 07:19:26 UTC | started cleaning up assembly code | 06 July 2021, 07:19:26 UTC |
06a9839 | bernard-kim | 06 July 2021, 06:57:19 UTC | updated conda and container setup instructions | 06 July 2021, 06:57:19 UTC |
a046fcd | bernard-kim | 06 July 2021, 04:37:06 UTC | started update on assembly scripts | 06 July 2021, 04:37:06 UTC |
d04a7c4 | bernard-kim | 24 June 2021, 06:37:14 UTC | added new scripts; cleanup needed | 24 June 2021, 06:37:14 UTC |
28e6645 | Bernard Kim | 19 March 2021, 18:38:22 UTC | fixed paper link in README | 19 March 2021, 18:38:22 UTC |
1c9fedc | Bernard Kim | 29 January 2021, 20:31:29 UTC | Update README.md | 29 January 2021, 20:31:29 UTC |
3e435d2 | Bernard Kim | 29 January 2021, 20:29:32 UTC | Update README.md | 29 January 2021, 20:29:32 UTC |
e8f92b1 | bernard-kim | 29 January 2021, 20:26:33 UTC | added data | 29 January 2021, 20:26:33 UTC |
19719aa | Bernard Kim | 15 December 2020, 09:26:36 UTC | Update README.md | 15 December 2020, 09:26:36 UTC |
4243850 | Bernard Kim | 15 December 2020, 09:25:32 UTC | Update README.md | 15 December 2020, 09:25:32 UTC |
aea04a7 | bernard-kim | 14 December 2020, 23:54:58 UTC | updated instructions | 14 December 2020, 23:54:58 UTC |
39f17a2 | bernard-kim | 14 December 2020, 23:46:03 UTC | changed README formatting | 14 December 2020, 23:46:03 UTC |
68d6504 | bernard-kim | 04 December 2020, 09:11:03 UTC | updated assembly docker | 04 December 2020, 09:11:03 UTC |
d131141 | bernard-kim | 04 December 2020, 00:11:00 UTC | small fix to README | 04 December 2020, 00:11:00 UTC |
3b9dcee | bernard-kim | 04 December 2020, 00:09:56 UTC | assembly pipeline updates | 04 December 2020, 00:09:56 UTC |
e046097 | bernard-kim | 03 December 2020, 22:38:34 UTC | updated rclone instructions | 03 December 2020, 22:38:34 UTC |
7f8749d | bernard-kim | 03 December 2020, 22:38:00 UTC | updated rclone instructions | 03 December 2020, 22:38:00 UTC |
62dca06 | bernard-kim | 03 December 2020, 22:31:08 UTC | removed unnecessary Rclone details | 03 December 2020, 22:31:08 UTC |
343f2ba | bernard-kim | 03 December 2020, 22:20:37 UTC | added tree files | 03 December 2020, 22:20:37 UTC |
aa734e3 | bernard-kim | 03 December 2020, 22:19:07 UTC | added tree files | 03 December 2020, 22:19:07 UTC |
f15affa | bernard-kim | 03 December 2020, 22:14:15 UTC | added BUSCO stuff | 03 December 2020, 22:14:15 UTC |
2d10788 | bernard-kim | 03 December 2020, 21:55:35 UTC | cleaned up text | 03 December 2020, 21:55:35 UTC |
10e51c1 | bernard-kim | 03 December 2020, 20:23:11 UTC | cleaned up links | 03 December 2020, 20:23:11 UTC |
b262193 | bernard-kim | 03 December 2020, 20:20:39 UTC | cleaned up links | 03 December 2020, 20:20:39 UTC |
ec97736 | bernard-kim | 03 December 2020, 20:16:48 UTC | container setup instructions | 03 December 2020, 20:16:48 UTC |
ba48316 | bernard-kim | 03 December 2020, 19:42:14 UTC | genomes link | 03 December 2020, 19:42:14 UTC |
40495f1 | bernard-kim | 03 December 2020, 06:49:07 UTC | set up basic files | 03 December 2020, 06:49:07 UTC |
278a206 | Bernard Kim | 01 October 2020, 23:19:11 UTC | Update README.md | 01 October 2020, 23:19:11 UTC |
2ec2b95 | bernard-kim | 28 September 2020, 20:15:10 UTC | updated documentation | 28 September 2020, 20:15:10 UTC |
3884c70 | bernard-kim | 28 September 2020, 19:53:10 UTC | updated README | 28 September 2020, 19:53:10 UTC |
026b218 | bernard-kim | 28 September 2020, 19:38:26 UTC | started README | 28 September 2020, 19:38:26 UTC |
63b90e3 | Bernard Kim | 28 September 2020, 19:11:14 UTC | Initial commit | 28 September 2020, 19:11:14 UTC |