Revision 4f8baa8fe4cad33753307d001edfbfa1432f57d2 authored by Thomas Mooney on 20 March 2013, 14:37:19 UTC, committed by Thomas Mooney on 20 March 2013, 14:37:19 UTC
1 parent 239dfb7
filter_bqm_for_errors
#!/usr/bin/env genome-perl
use strict;
use warnings;
my $found_error = 0;
my @stdin;
while (my $stdin = <>) {
push @stdin, $stdin;
$found_error = 1 if ($stdin =~ /ERROR:/);
}
$found_error = 1 if ($stdin[-1] !~ /^COMMITTED$/);
if ($found_error) {
print @stdin;
}
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