Revision 50c4e9f16a0ed18f86a97f5989c2419f9348899a authored by MPillas on 07 November 2022, 10:58:35 UTC, committed by GitHub on 07 November 2022, 10:58:35 UTC
* Changes in faithsim to be used with python3 * change the first line to get the env * create a directory for the template bank project with the workflow using Pegasus * changes because I realized the pycbc_collect_results output is a single flie * currently trying to run the workflow and fix the issues I encounter, here I started with create inj issues * now fixing pycbc_faithsim job * almost final version just having problem with the plot names * clean the code * add bash files to run and submit the workflow * final workflow and associated scripts problem because the kickstart job fails after submission * fix a mistake with a parameter from the config file * changes in submit file * fix the run_workflow.sh script, the kickstar job seems to work now * fix an error in create_inj script * all scripts for the workflow, final version * rebase and move the scripts to right directories * remove the old files * remove the hardcoded config path * lot of changes, add a script to add some parameters in the dat file before the plotting script, put all the arguments in the configuration file, remove them from the workflow script ... * add the header in the dat file * changes in the descriptions of the scripts given to argparse and compute the derived quantities in the plotting script * remove the path to the collect full results in the ini file * use black on the plot script * fix a bug in the plotting script * changes suggested by Tito and Ian * fix bug: change q into mchirp * fix bug : add d in the derived_map for the s2 magnitude * last bug fixed * Ian's comments Co-authored-by: Marion Pillas <marion.pillas@ldas-pcdev3.ligo.caltech.edu> Co-authored-by: Marion Pillas <marion.pillas@ldas-pcdev1.ligo.caltech.edu> Co-authored-by: Marion Pillas <marion.pillas@ldas-pcdev6.ligo.caltech.edu> Co-authored-by: Marion Pillas <marion.pillas@ldas-grid.ligo.caltech.edu>
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pycbc_live_nagios_monitor
#!/bin/env python
# Monitor the pycbc live process and log files to determine the state
# Future
# Actually check log file for errors and node specific problems
# Monitor data transfer to sites as well
import json
import lal
import argparse
import time
import os.path
parser = argparse.ArgumentParser(
description="This scripts monitors the log file of the "
"PyCBC Live process. This is used to generate a json file that can be "
"picked up by nagios to determine if the PyCBC Live process has died.")
parser.add_argument('--log-file',
help="The pycbc live log file")
parser.add_argument('--output-file',
help="The JSON nagios status file")
parser.add_argument('--check-interval', type=int,
help="Time in seconds to wait before rechecking status")
args = parser.parse_args()
while 1:
everything_ok = True
status = {}
status['author'] = "Alexander Harvey Nitz"
status['email'] = "alex.nitz@ligo.org"
status['created_gps'] = int(lal.GPSTimeNow())
try:
tdiff = time.time() - os.path.getmtime(args.log_file)
# Check that the pycbc live logfile has been updated recently.
if tdiff >= 60: everything_ok = False
except:
everything_ok = False
if everything_ok:
status['status_intervals'] = \
[
{
"num_status": 0,
"txt_status": "OK: No reported problems",
"start_sec": 0
},
{
"num_status": 1,
"txt_status": "WARNING: The process is slow to report.",
"start_sec": 120
},
{
"num_status": 3,
"txt_status": "UNKNOWN: It has been 4 minutes. Has it died?",
"start_sec": 240
}
]
else:
status['status_intervals'] = [{"num_status": 2,
"txt_status": "PyCBC Live appears to be down!",
}]
open(args.output_file, 'w').write(json.dumps(status))
time.sleep(args.check_interval)
Computing file changes ...
