| 57f69fe | Helge | 04 June 2014, 14:26:09 UTC | Removed not needed debug outputs. | 04 June 2014, 14:26:09 UTC |
| 96c22c1 | Helge | 04 June 2014, 14:21:28 UTC | Fixed bug on accessing non constant delayed firing rates. | 04 June 2014, 14:21:28 UTC |
| 3048270 | Helge | 04 June 2014, 13:59:00 UTC | Updated createFromCSR according to structural change. | 04 June 2014, 13:59:00 UTC |
| 3492a68 | Helge | 04 June 2014, 13:52:04 UTC | Projections update the maximum delays of presynaptic populations. | 04 June 2014, 13:52:04 UTC |
| 6d2229d | Helge | 04 June 2014, 13:49:28 UTC | Analyzer forward access to CSR object of the projection. | 04 June 2014, 13:49:28 UTC |
| 463549a | Helge | 04 June 2014, 13:47:22 UTC | Extended CSR: delays are stored seperatly, added max_delay. Changed connectors: if delays are int they will be interpreted as time in ms. | 04 June 2014, 13:47:35 UTC |
| 325afbf | Helge | 04 June 2014, 09:52:48 UTC | RateDendriteGenerator distinguishes now the psp implementation according to the delay. | 04 June 2014, 09:52:48 UTC |
| dc03532 | Helge Dinkelbach | 03 June 2014, 09:49:36 UTC | Fixed typos. | 03 June 2014, 09:49:36 UTC |
| 89da3e8 | Julien Vitay | 02 June 2014, 12:43:30 UTC | g_exc=0.0 is now standard synaptic behavior. | 02 June 2014, 12:43:30 UTC |
| 80fe1c1 | Julien Vitay | 02 June 2014, 11:41:29 UTC | Merge branch 'develop' of bitbucket.org:annarchy/annarchy-4.0 into develop | 02 June 2014, 11:41:29 UTC |
| 1a21767 | Julien Vitay | 02 June 2014, 11:41:09 UTC | Merge branch 'popviews_connector' into develop | 02 June 2014, 11:41:09 UTC |
| 7801aa3 | Julien Vitay | 02 June 2014, 11:30:09 UTC | Started making g_exc = 0.0 default in spiking neurons. | 02 June 2014, 11:30:09 UTC |
| 8b8d349 | Helge | 02 June 2014, 09:09:26 UTC | Refractory period can be inited with random initialization. | 02 June 2014, 09:09:26 UTC |
| 7807dd5 | Julien Vitay | 01 June 2014, 18:58:55 UTC | Allowed PopulationViews to be used to build Projections (except gaussian and dog). | 01 June 2014, 18:58:55 UTC |
| c98daa8 | Julien Vitay | 01 June 2014, 17:54:09 UTC | Started allowing PopulationViews to be used in Projections. Works for one sub-projection, but not two.... | 01 June 2014, 17:54:09 UTC |
| d1ae89a | Helge | 01 June 2014, 10:10:10 UTC | Added measured times (raw data) to scalability plot. Reordered code of Performance test. | 01 June 2014, 10:10:10 UTC |
| e80a85d | Helge | 31 May 2014, 17:27:01 UTC | Changed internal structure of profiling extension. Extended profiler by scalability analyzis. | 31 May 2014, 17:27:01 UTC |
| 4b985ad | Julien Vitay | 31 May 2014, 13:49:40 UTC | import numpy was not needed in Connector.pxd | 31 May 2014, 13:49:40 UTC |
| af363c5 | Julien Vitay | 31 May 2014, 13:40:03 UTC | doc: added tutorial to build connector methods in Cython | 31 May 2014, 13:40:03 UTC |
| f6a9edc | Julien Vitay | 31 May 2014, 12:16:01 UTC | Exported CSR to create conection patterns | 31 May 2014, 12:16:01 UTC |
| 1c12313 | Julien Vitay | 31 May 2014, 11:46:41 UTC | doc: refactored the documentation | 31 May 2014, 11:46:41 UTC |
| 05b90d1 | Julien Vitay | 29 May 2014, 19:23:11 UTC | Allowed RandomDistribution objects to take global parameters as arguments. Warning: - changes in the parameters won't have effect after compile() - Needs to find a structure for that, wuthout performance penalty. | 29 May 2014, 19:23:11 UTC |
| a3d76ca | Julien Vitay | 29 May 2014, 13:37:39 UTC | min and max bounds of a variable can now be an expression of other variables. | 29 May 2014, 13:37:39 UTC |
| 2689fab | Julien Vitay | 29 May 2014, 12:30:21 UTC | Allowed the operators ==, !=, is and is not in conditions (also spike conditions) | 29 May 2014, 12:30:21 UTC |
| 28febbe | Julien Vitay | 29 May 2014, 11:05:43 UTC | Started version 4.1.3 | 29 May 2014, 11:05:43 UTC |
| 520e29b | Julien Vitay | 28 May 2014, 21:48:10 UTC | Merge branch 'develop' of bitbucket.org:annarchy/annarchy-4.0 into develop | 28 May 2014, 21:48:10 UTC |
| b5e7f0d | Julien Vitay | 28 May 2014, 21:47:24 UTC | simplify for conditions produces weird C code. Taken out. | 28 May 2014, 21:47:24 UTC |
| a612b15 | Julien Vitay | 28 May 2014, 21:46:25 UTC | Parser produced an error message when mean(pre.r) was used in a global variable. | 28 May 2014, 21:46:25 UTC |
| 44bba36 | Julien Vitay | 28 May 2014, 21:45:04 UTC | stop_recording() was giving a wrong error message. | 28 May 2014, 21:45:04 UTC |
| 9b14609 | Julien Vitay | 27 May 2014, 13:54:29 UTC | Analysis of psp was till the old way... | 27 May 2014, 13:54:29 UTC |
| b0af439 | Helge | 26 May 2014, 22:11:38 UTC | Extended profiler. | 26 May 2014, 22:11:38 UTC |
| 97623a1 | Helge | 26 May 2014, 21:10:37 UTC | Added Network.destroy() function. | 26 May 2014, 21:10:37 UTC |
| 7aaa2a3 | Helge | 26 May 2014, 21:09:38 UTC | Added _DEBUG_SIMULATION_CONTROL condition to several debug messages. | 26 May 2014, 21:09:38 UTC |
| 34269b9 | Helge | 26 May 2014, 21:07:38 UTC | Added Network::destroy() | 26 May 2014, 21:07:38 UTC |
| 094a3e5 | Julien Vitay | 26 May 2014, 20:11:52 UTC | Fixed the _warning method to emit warnings only when warnings are not suppressed in setup() | 26 May 2014, 20:11:52 UTC |
| 0658ba7 | Julien Vitay | 26 May 2014, 19:33:37 UTC | Added warnings when a target is used in a neuron but not connected. | 26 May 2014, 19:33:37 UTC |
| c3b10a0 | Julien Vitay | 26 May 2014, 19:27:36 UTC | Synapses now have access to pre.sum(dopa) or post.sum(exc) directly. | 26 May 2014, 19:27:36 UTC |
| ff2249e | Julien Vitay | 26 May 2014, 16:16:04 UTC | Fixed bug wen accessing pre/post synaptic variables in a synapse. | 26 May 2014, 16:16:04 UTC |
| 2bb09cb | Julien Vitay | 26 May 2014, 15:51:23 UTC | Stored the inverse rank in pre_spike to avoid multiple accesses to the the array. | 26 May 2014, 15:51:23 UTC |
| f845ea4 | Julien Vitay | 26 May 2014, 15:21:08 UTC | Moved PoissonPopulation to the core | 26 May 2014, 15:21:08 UTC |
| b037e00 | Julien Vitay | 26 May 2014, 14:33:59 UTC | Allowed variables to differ only by capitalization (eg c and C). The generated C++ methods know follow the python convention, not C++. | 26 May 2014, 14:33:59 UTC |
| 167fb6d | Julien Vitay | 26 May 2014, 13:07:09 UTC | Started the 4.1.2 version. | 26 May 2014, 13:07:09 UTC |
| a08fe0f | Julien Vitay | 26 May 2014, 13:04:01 UTC | Added a version tracker which recompiles when the ANNarchy release number has changed. | 26 May 2014, 13:04:01 UTC |
| 230e10f | Julien Vitay | 26 May 2014, 11:47:25 UTC | Replaced "rate" by "r". | 26 May 2014, 11:47:25 UTC |
| 643f353 | Julien Vitay | 26 May 2014, 11:27:41 UTC | Started replacing rate by r. Still a bug. | 26 May 2014, 11:27:41 UTC |
| bf95395 | Julien Vitay | 23 May 2014, 15:26:58 UTC | Replaced systematically "value" by "w" | 23 May 2014, 15:26:58 UTC |
| 0e09ec4 | Julien Vitay | 23 May 2014, 14:37:28 UTC | Doc: fixed typos. | 23 May 2014, 14:37:28 UTC |
| 4575d70 | Helge Dinkelbach | 23 May 2014, 13:33:54 UTC | Split up propagate spike in pre and post phase. | 23 May 2014, 13:33:54 UTC |
| 7872920 | Helge Dinkelbach | 23 May 2014, 13:32:45 UTC | spike emitation only if not in refractory period. | 23 May 2014, 13:32:45 UTC |
| e737951 | Helge Dinkelbach | 23 May 2014, 13:31:55 UTC | Pre events are only executed if there was no post spike. | 23 May 2014, 13:31:55 UTC |
| 2c81283 | Helge Dinkelbach | 23 May 2014, 13:31:12 UTC | Corrected indexing error. | 23 May 2014, 13:31:12 UTC |
| cf633a6 | Helge Dinkelbach | 23 May 2014, 13:30:50 UTC | Added new functions for spike event handling | 23 May 2014, 13:30:50 UTC |
| 9b10515 | Helge Dinkelbach | 23 May 2014, 13:29:46 UTC | Propagate spikes now divided into post and pre phase. | 23 May 2014, 13:29:46 UTC |
| ee476f2 | Helge Dinkelbach | 23 May 2014, 11:54:47 UTC | Merge branch 'refractory' into develop | 23 May 2014, 11:54:47 UTC |
| c78d43b | Julien Vitay | 23 May 2014, 11:53:28 UTC | Merge branch 'develop' of bitbucket.org:annarchy/annarchy-4.0 into develop | 23 May 2014, 11:53:28 UTC |
| 7adb812 | Helge Dinkelbach | 23 May 2014, 11:53:24 UTC | Merge branch 'refractory' of https://bitbucket.org/annarchy/annarchy-4.0 into refractory | 23 May 2014, 11:53:24 UTC |
| 24c6238 | Helge Dinkelbach | 23 May 2014, 11:52:40 UTC | Set default number of threads to 1 | 23 May 2014, 11:52:40 UTC |
| f453dd0 | Julien Vitay | 23 May 2014, 11:52:31 UTC | Updated the description of OpenMP in the doc. | 23 May 2014, 11:52:31 UTC |
| 774ce36 | Julien Vitay | 23 May 2014, 11:39:48 UTC | Added import numpy in Utils | 23 May 2014, 11:39:48 UTC |
| 2075442 | Helge Dinkelbach | 23 May 2014, 11:38:25 UTC | Updated docs: refractoriness. | 23 May 2014, 11:38:25 UTC |
| 7bfb539 | Helge Dinkelbach | 23 May 2014, 11:17:11 UTC | Added playground example for spike neurons. | 23 May 2014, 11:17:11 UTC |
| b86a552 | Helge Dinkelbach | 23 May 2014, 11:07:17 UTC | Added Population::reset(int) to reset a neuron during refractoring period. | 23 May 2014, 11:08:17 UTC |
| 02d30e6 | Helge Dinkelbach | 23 May 2014, 11:06:06 UTC | Changed behavior of neurons during refactoring phase: reset is called every step. | 23 May 2014, 11:06:06 UTC |
| 38bdd63 | Helge Dinkelbach | 23 May 2014, 09:37:04 UTC | fixed minor bugs. | 23 May 2014, 09:37:04 UTC |
| 7a5117b | Julien Vitay | 23 May 2014, 07:20:05 UTC | Small changes in Tranformations | 23 May 2014, 07:20:05 UTC |
| ff9b7f2 | Helge Dinkelbach | 23 May 2014, 07:02:31 UTC | fixed typo | 23 May 2014, 07:02:31 UTC |
| b0cdcab | Helge Dinkelbach | 23 May 2014, 06:58:02 UTC | Fixed wrong initialization value for refractory_times if no value is set. | 23 May 2014, 06:58:02 UTC |
| 397d8ec | Helge Dinkelbach | 23 May 2014, 06:43:35 UTC | Merge branch 'develop' into refractory | 23 May 2014, 06:43:35 UTC |
| 755b4d7 | Helge Dinkelbach | 23 May 2014, 06:43:29 UTC | Restored SimpleSTDPModel and add Refractoriness example. | 23 May 2014, 06:43:29 UTC |
| fffbdee | Helge Dinkelbach | 23 May 2014, 06:27:39 UTC | Updated docs: added structural plasticity and updated version log. | 23 May 2014, 06:27:39 UTC |
| 044240b | Helge Dinkelbach | 22 May 2014, 14:49:35 UTC | Introduced refractory times into CPP core. Added refractory as parameter to SpikeNeuron. | 22 May 2014, 14:49:35 UTC |
| 5750ac2 | Julien Vitay | 22 May 2014, 12:50:56 UTC | Cleaned the example with simple STDP. | 22 May 2014, 12:50:56 UTC |
| f065da4 | Julien Vitay | 22 May 2014, 12:38:07 UTC | Bug in Projection.set_value return value | 22 May 2014, 12:38:07 UTC |
| a76dc57 | Julien Vitay | 22 May 2014, 12:32:33 UTC | Added a clip() function for semi-linear functions. | 22 May 2014, 12:32:33 UTC |
| 8ecba12 | Julien Vitay | 22 May 2014, 12:11:04 UTC | Simplified the format of the save files. Added Dendrite._set_value. | 22 May 2014, 12:11:04 UTC |
| bed14f9 | Julien Vitay | 22 May 2014, 09:27:47 UTC | Merge branch 'develop' of bitbucket.org:annarchy/annarchy-4.0 into develop | 22 May 2014, 09:27:47 UTC |
| e198e9b | Julien Vitay | 22 May 2014, 09:27:28 UTC | IO adapted. | 22 May 2014, 09:27:28 UTC |
| b2ce99e | Helge Dinkelbach | 22 May 2014, 09:20:24 UTC | Removed stupid bug in parallelization of global_operations(). Double precision is now default. | 22 May 2014, 09:20:24 UTC |
| 155788f | Julien Vitay | 22 May 2014, 08:25:36 UTC | Added a cython function to compute a smoothed firing rate based on spike timings. Moved out raster_plot() from Population into core.Utils. | 22 May 2014, 08:25:36 UTC |
| 077ac0e | Helge Dinkelbach | 22 May 2014, 08:02:12 UTC | Added parallelism control flag: _DEBUG_PARALLELISM | 22 May 2014, 08:09:43 UTC |
| 767084d | Helge Dinkelbach | 22 May 2014, 08:01:20 UTC | Simulation control debug messages are moved to other flag: FLAG _DEBUG_SIMULATION_CONTROL, to clarify debug output | 22 May 2014, 08:01:20 UTC |
| 5b624cf | Helge Dinkelbach | 22 May 2014, 07:34:40 UTC | Merge branch 'develop' of https://bitbucket.org/annarchy/annarchy-4.0 into develop | 22 May 2014, 07:34:40 UTC |
| 3626f0f | Helge Dinkelbach | 22 May 2014, 07:34:02 UTC | Simplified access to DataLog. Distinction between analyze and visualize. Changed min/max error bar to std error bar. | 22 May 2014, 07:34:02 UTC |
| 9d72d8b | Julien Vitay | 21 May 2014, 14:50:25 UTC | Merge branch 'develop' of bitbucket.org:annarchy/annarchy-4.0 into develop | 21 May 2014, 14:50:25 UTC |
| 592ead8 | Julien Vitay | 21 May 2014, 14:49:22 UTC | Bug in the exponential deiscritization and spike condition (was only >=, not >) | 21 May 2014, 14:49:22 UTC |
| 1c74ae8 | Helge Dinkelbach | 21 May 2014, 14:05:20 UTC | Merge branch 'develop' of https://bitbucket.org/annarchy/annarchy-4.0 into develop | 21 May 2014, 14:05:20 UTC |
| 83dec32 | Helge Dinkelbach | 21 May 2014, 14:03:58 UTC | merged 'structural_plasticity' into develop (tested successfully all examples) | 21 May 2014, 14:03:58 UTC |
| 2ad1d16 | Julien Vitay | 21 May 2014, 09:44:32 UTC | Added an extension for Poisson populations. | 21 May 2014, 09:44:32 UTC |
| a23b0b7 | Julien Vitay | 21 May 2014, 08:36:36 UTC | Merge branch 'develop' of bitbucket.org:annarchy/annarchy-4.0 into develop | 21 May 2014, 08:36:36 UTC |
| 53bd7a7 | Helge Dinkelbach | 21 May 2014, 07:13:25 UTC | Compiler outputs etc. are not piped into file, in case of verbose mode. | 21 May 2014, 07:13:25 UTC |
| b835294 | Helge Dinkelbach | 21 May 2014, 07:04:07 UTC | Added verbose to command line arguments. | 21 May 2014, 07:04:07 UTC |
| 74e7f3d | Helge Dinkelbach | 21 May 2014, 06:59:55 UTC | replaced eval by getattr statement | 21 May 2014, 06:59:55 UTC |
| e451561 | Helge Dinkelbach | 21 May 2014, 06:44:22 UTC | updated test setup | 21 May 2014, 06:44:22 UTC |
| ad5e614 | Helge Dinkelbach | 21 May 2014, 06:32:54 UTC | corrected minor typo | 21 May 2014, 06:32:54 UTC |
| eb24fd6 | Julien Vitay | 20 May 2014, 16:13:19 UTC | Improved Izhikevich example. | 20 May 2014, 16:13:19 UTC |
| aba21d9 | Julien Vitay | 20 May 2014, 15:53:48 UTC | Merge branch 'lastspike' into develop | 20 May 2014, 15:53:48 UTC |
| fba3bca | Julien Vitay | 20 May 2014, 15:53:19 UTC | Updated the global record methods. | 20 May 2014, 15:53:19 UTC |
| 2577e43 | Julien Vitay | 20 May 2014, 15:17:39 UTC | CHanged record() to start_record() in Global to be consistent with Population. | 20 May 2014, 15:17:39 UTC |
| 7115467 | Helge Dinkelbach | 20 May 2014, 15:09:56 UTC | Added random number generation on projections. | 20 May 2014, 15:09:56 UTC |
| 3046841 | Julien Vitay | 20 May 2014, 14:42:57 UTC | Started modifying record(). | 20 May 2014, 14:42:57 UTC |
