Revision 58ae1a3c4ad1ae219d40032c0e554919c67c7391 authored by Thomas Mooney on 17 December 2012, 22:31:04 UTC, committed by Thomas Mooney on 17 December 2012, 22:31:04 UTC
Cleanup involved in making this change: *Use samtools faidx instead of expiece. *Use \t as delimeter instead of . which may appear in contig names. *Call into ReadRemap as class methods (to prevent AUTOLOAD warnings).
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| File | Mode | Size |
|---|---|---|
| alignment_summary @ 8932081 | ||
| bam-readcount @ c044123 | ||
| bam-window @ 16db84f | ||
| bassovac @ 41b7bc4 | ||
| bin | ||
| breakdancer @ 8f07f3d | ||
| cron @ 9bb5f1f | ||
| fqgrep @ fe0206d | ||
| genome-db-cosmic @ bdec904 | ||
| genome-db-omim @ d9b949a | ||
| genome-db-pfam @ e5acfb0 | ||
| genome-music | ||
| genome-music-testdata @ 860ea75 | ||
| genome-snapshot-deps @ b8462fe | ||
| genome-snapshot-testdata @ 72c0ded | ||
| genome-sys-user | ||
| genome-webserver | ||
| genome-www | ||
| getopt-complete @ 4094a60 | ||
| gmt-sys-vmbuilder | ||
| graphite @ 495c2b8 | ||
| init | ||
| jenkins @ 9fac041 | ||
| joinx @ e83e763 | ||
| lib | ||
| pairoscope @ 91c203a | ||
| scripts | ||
| sff2fastq @ b815f97 | ||
| somatic-sniper @ d736546 | ||
| tgi-etc @ 08ba1a6 | ||
| tigra @ 6fe6b74 | ||
| tigra-sv @ 715dda8 | ||
| ur @ 27e73cf | ||
| varscan @ 83ae9d8 | ||
| vendor | ||
| workflow @ 32a3a01 | ||
| .gitignore | -rw-r--r-- | 67 bytes |
| .gitmodules | -rw-r--r-- | 8.0 KB |
| LICENSE | -rw-r--r-- | 7.5 KB |
| README | -rw-r--r-- | 154 bytes |
| WHERE_TO_PUT_CODE | -rw-r--r-- | 2.4 KB |
| create-c-project.sh | -rwxr-xr-x | 2.9 KB |
| create-project | -rwxr-xr-x | 2.9 KB |
| test-data-relocate-me | l--------- | 46 bytes |
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