https://github.com/GPflow/GPflow
Revision 5c89c1e5ab1b9a91b6df60f7ce8e75cac810f14b authored by st-- on 08 April 2020, 09:48:25 UTC, committed by GitHub on 08 April 2020, 09:48:25 UTC
Addresses #1405 

* New structure underneath gpflow/likelihoods/:
  * base.py: all base classes (Likelihood, MonteCarloLikelihood, ScalarLikelihood) and SwitchedLikelihood
  * multiclass.py: multi-class classification (Softmax, MultiClass + RobustMax)
  * scalar_continuous.py: continuous-Y subclasses of ScalarLikelihood (Gaussian, StudentT, Exponential, Beta, Gamma)
  * scalar_discrete.py: discrete-Y subclasses of ScalarLikelihood (Bernoulli, Poisson, Ordinal)
  * utils.py: the `inv_probit` link function used by Bernoulli and Beta likelihoods
  * misc.py: GaussianMC - used for demonstration/tests only.
  (Note that usage, i.e. accessing gpflow.likelihoods.<LikelihoodClass>, has not changed.)

* Tests for multi-class classification likelihoods moved out into their own test module (including stubs for the missing MultiClass quadrature tests of #1091)

* Re-activates the quadrature tests for ScalarLikelihood subclasses with analytic variational_expectations/predict_log_density/predict_mean_and_var that inadvertently got disabled by #1334 

* Fixes a bug in Bernoulli._predict_log_density that was uncovered by these tests

* Fixes random seed for mock data generation in test_natural_gradient to make svgp_vs_gpr test pass again
1 parent dda8c39
History
Tip revision: 5c89c1e5ab1b9a91b6df60f7ce8e75cac810f14b authored by st-- on 08 April 2020, 09:48:25 UTC
Improve structure of likelihoods subdirectory (#1416)
Tip revision: 5c89c1e
File Mode Size
.circleci
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doc
gpflow
tests
.coveragerc -rw-r--r-- 283 bytes
.coveralls.yml -rw-r--r-- 23 bytes
.gitignore -rw-r--r-- 828 bytes
.pylintrc -rw-r--r-- 14.6 KB
GLOSSARY.md -rw-r--r-- 1.4 KB
LICENSE -rw-r--r-- 11.1 KB
MANIFEST.in -rw-r--r-- 182 bytes
Makefile -rw-r--r-- 682 bytes
README.md -rw-r--r-- 9.6 KB
RELEASE.md -rw-r--r-- 6.9 KB
VERSION -rw-r--r-- 5 bytes
codecov.yml -rw-r--r-- 274 bytes
contributing.md -rw-r--r-- 7.3 KB
notebooks l--------- 21 bytes
setup.py -rw-r--r-- 3.4 KB
tests_requirements.txt -rw-r--r-- 232 bytes

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