https://github.com/ZhiGroup/bi-PBWT

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Revision Author Date Message Commit Date
5ca3dad changed pass by value to reference 18 July 2021, 02:28:48 UTC
0d04388 allows for filenames with multiple periods 17 July 2021, 22:06:18 UTC
026a0a7 merged .blocks and .IDs files 16 July 2021, 23:38:51 UTC
37584cc Add files via upload 16 July 2021, 15:59:55 UTC
317e72e Merge branch 'master' of https://github.com/ZhiGroup/bi-PBWT 15 July 2021, 21:32:03 UTC
43c3135 allows for filenames with mulitple periods 15 July 2021, 21:31:49 UTC
2febeaf simplified gap code 05 July 2021, 23:03:45 UTC
922d491 simplified algo 1 block assignment code 05 July 2021, 22:39:28 UTC
191ff7c added comment on special gap size of zero case 05 July 2021, 07:06:13 UTC
003159a Merge branch 'master' of https://github.com/ZhiGroup/bi-PBWT 05 July 2021, 06:31:47 UTC
deee827 enclosed input with VCFReader struct 05 July 2021, 06:30:53 UTC
6034a58 fixed markdown angle bracket issue 01 July 2021, 23:47:53 UTC
23dd48e improved readability of README 01 July 2021, 23:42:10 UTC
2a1da83 fixed spelling mistake 01 July 2021, 23:29:40 UTC
fafe741 added Forward-Only PBWT documentation 01 July 2021, 23:23:43 UTC
12df0ce Merge branch 'master' of https://github.com/ZhiGroup/bi-PBWT 01 July 2021, 22:34:55 UTC
871be1c changed haplotype ID suffix format 01 July 2021, 22:34:11 UTC
1ea5e62 Update README.md 01 July 2021, 19:21:57 UTC
981b021 added Makefile for forward-only PBWT 01 July 2021, 19:08:54 UTC
2075ce2 added Forward-Only PBWT 01 July 2021, 19:04:32 UTC
c86f56e removed debug code 10 June 2021, 20:42:04 UTC
0689b23 Merge branch 'master' of https://github.com/ZhiGroup/bi-PBWT 03 June 2021, 22:32:44 UTC
9386e0e fixed 1-off block length cutoff bug 03 June 2021, 22:31:50 UTC
0a138e1 changed file naming 29 May 2021, 21:16:36 UTC
8930fd4 changed algorithm 2 implementation to radix sort 26 May 2021, 01:59:55 UTC
618f061 simplified genomic pointers 25 May 2021, 21:43:58 UTC
f568aea fixed sparse table bug: changed min to max 25 May 2021, 20:32:13 UTC
60dec6c added haplotype indentifiers for each individual ID 25 May 2021, 04:45:25 UTC
3ad0633 Used block trick to create linear sparse table construction 25 May 2021, 04:29:27 UTC
4c60bf6 increased size of example vcf file 30 March 2021, 00:33:43 UTC
a3b88e9 added GNU getopt as a dependency 21 February 2021, 00:44:46 UTC
7fec322 Merge branch 'master' of https://github.com/ZhiGroup/bi-PBWT 18 February 2021, 07:29:39 UTC
e9de0ba updated README 18 February 2021, 07:27:39 UTC
b9e2ed5 updated help page 15 February 2021, 05:54:21 UTC
22e96ed added support for both site and base pair distance 10 February 2021, 01:07:29 UTC
a2a019e Example VCF file 10 February 2021, 01:03:40 UTC
4313256 Merge branch 'master' of https://github.com/ZhiGroup/bi-PBWT 09 February 2021, 07:15:24 UTC
cbf10f2 added gap and mismatch cluster functionality 09 February 2021, 07:15:11 UTC
f39c10f Update README.md 05 February 2021, 18:20:36 UTC
cf8803e Update README.md 05 February 2021, 15:29:15 UTC
387f712 modified README 05 February 2021, 01:36:37 UTC
aeac50c added help page 05 February 2021, 01:16:05 UTC
5f68303 added gap support 05 February 2021, 00:23:29 UTC
a81b812 code cleanup 04 February 2021, 05:18:58 UTC
8209640 init 28 January 2021, 03:38:45 UTC
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