5f48373 | Alexey Sergushichev | 14 July 2022, 16:02:58 UTC | fix tests | 14 July 2022, 16:02:58 UTC |
bb4dbde | Alexey Sergushichev | 14 July 2022, 15:37:14 UTC | fix versions | 14 July 2022, 15:37:14 UTC |
dcf8e37 | Alexey Sergushichev | 14 July 2022, 14:47:49 UTC | changed logic for supported datasets, fix PHANTASUS-T-53 | 14 July 2022, 14:47:49 UTC |
5dbc7ef | Alexey Sergushichev | 14 June 2022, 18:30:35 UTC | Longer timeout for "Waiting..." dialog | 14 June 2022, 18:30:35 UTC |
80dee83 | clevermx | 14 June 2022, 15:04:25 UTC | fix usage of lfcshrink keep stat column and add explicit shrink type | 14 June 2022, 15:04:25 UTC |
1708586 | clevermx | 25 May 2022, 11:01:24 UTC | Firefox installation without snapd for JB space tests. Merge-request: PHANTASUS-MR-26 Merged-by: Maksim Kleverov <klevermx@gmail.com> | 25 May 2022, 11:01:24 UTC |
0432fd8 | Alexey Sergushichev | 05 May 2022, 15:06:59 UTC | sync versions | 05 May 2022, 15:06:59 UTC |
f333522 | Nitesh Turaga | 26 April 2022, 15:48:03 UTC | bump x.y.z version to odd y following creation of RELEASE_3_15 branch | 26 April 2022, 15:48:03 UTC |
fbf8dff | Nitesh Turaga | 26 April 2022, 15:48:03 UTC | bump x.y.z version to even y prior to creation of RELEASE_3_15 branch | 26 April 2022, 15:48:03 UTC |
dcba3f2 | Alexey Sergushichev | 11 April 2022, 15:32:32 UTC | version bump | 11 April 2022, 15:32:32 UTC |
ff6311c | clevermx | 11 April 2022, 10:35:45 UTC | fix paths in testdata's meta.rda and test for them | 11 April 2022, 15:31:26 UTC |
c55c945 | clevermx | 07 April 2022, 15:58:52 UTC | add relative paths in meta.rda | 11 April 2022, 15:31:26 UTC |
5dbb074 | Alexey Sergushichev | 06 April 2022, 11:05:54 UTC | fix for apache permission error on old dockerd | 06 April 2022, 11:05:54 UTC |
951c45f | Alexey Sergushichev | 30 March 2022, 09:17:37 UTC | proper version bump | 30 March 2022, 09:17:37 UTC |
6df854b | Alexey Sergushichev | 30 March 2022, 09:08:06 UTC | Version bump | 30 March 2022, 09:08:06 UTC |
934f36c | clevermx | 29 March 2022, 17:51:51 UTC | remove sub applied to paths | 29 March 2022, 17:51:51 UTC |
0a79894 | clevermx | 17 February 2022, 16:30:23 UTC | fix double use of /meta/genes for zoo counts | 17 February 2022, 16:30:23 UTC |
373c171 | Alexey Sergushichev | 15 February 2022, 12:10:33 UTC | fix version in js | 15 February 2022, 12:10:33 UTC |
b712fdd | clevermx | 10 February 2022, 12:15:20 UTC | fix id's for zoo | 10 February 2022, 12:15:20 UTC |
b83c7d4 | Alexey Sergushichev | 09 February 2022, 08:58:06 UTC | version bump | 09 February 2022, 08:58:06 UTC |
66357a4 | clevermx | 18 January 2022, 11:09:39 UTC | Modify counts processing in order to support additional collections (not only ARCHs4). Add meta-files generation for new counts processing. Add support for 8+ versions of ARCHs4. Co-authored-by: Alexey Sergushichev <alserg@itmo.ru> Merge-request: PHANTASUS-MR-21 Merged-by: Maksim Kleverov <klevermx@gmail.com> | 18 January 2022, 11:09:39 UTC |
d230978 | Alexey Sergushichev | 30 November 2021, 13:04:04 UTC | Fix PHANTASUS-T-48 | 30 November 2021, 13:04:04 UTC |
5bcaa19 | Alexey Sergushichev | 13 November 2021, 18:46:20 UTC | bump version in js | 13 November 2021, 18:46:20 UTC |
a83f5d4 | Alexey Sergushichev | 13 November 2021, 18:43:28 UTC | version bump | 13 November 2021, 18:43:28 UTC |
f60223b | Alexey Sergushichev | 04 November 2021, 12:25:10 UTC | check correctness of GSE ID before download | 04 November 2021, 12:25:10 UTC |
e88df20 | Alexey Sergushichev | 04 November 2021, 12:24:44 UTC | workaround for seandavi/GEOquery #120 | 04 November 2021, 12:24:44 UTC |
8c06bbe | Alexey Sergushichev | 04 November 2021, 10:17:26 UTC | fix load of GPL soft files | 04 November 2021, 10:17:26 UTC |
669840a | Alexey Sergushichev | 02 November 2021, 18:02:25 UTC | space.kts fixes | 02 November 2021, 18:02:25 UTC |
11b7294 | Alexey Sergushichev | 02 November 2021, 18:01:18 UTC | update js | 02 November 2021, 18:01:18 UTC |
aa2dee3 | Alexey Sergushichev | 02 November 2021, 17:30:47 UTC | fix some test warnings | 02 November 2021, 17:30:47 UTC |
9ca07de | Alexey Sergushichev | 02 November 2021, 17:30:24 UTC | testing correctness of versions in static files | 02 November 2021, 17:30:24 UTC |
bc79a9b | Alexey Sergushichev | 01 November 2021, 18:05:43 UTC | version bump | 01 November 2021, 18:05:43 UTC |
75da639 | Alexey Sergushichev | 01 November 2021, 18:04:03 UTC | Merge branch 'space_jobs' | 01 November 2021, 18:04:03 UTC |
9ce860a | Alexey Sergushichev | 01 November 2021, 17:47:58 UTC | Merge branch 'master' of git.bioconductor.org:packages/phantasus | 01 November 2021, 17:47:58 UTC |
dfd4b41 | Alexey Sergushichev | 01 November 2021, 16:42:57 UTC | update js | 01 November 2021, 16:42:57 UTC |
b02f634 | Alexey Sergushichev | 01 November 2021, 16:42:37 UTC | fix commit id generation for update_js.sh | 01 November 2021, 16:42:37 UTC |
9ba9b97 | Nitesh Turaga | 26 October 2021, 16:42:56 UTC | bump x.y.z version to odd y following creation of RELEASE_3_14 branch | 26 October 2021, 16:42:56 UTC |
26a4f40 | Nitesh Turaga | 26 October 2021, 16:42:56 UTC | bump x.y.z version to even y prior to creation of RELEASE_3_14 branch | 26 October 2021, 16:42:56 UTC |
294a0fd | Alexey Sergushichev | 26 October 2021, 14:09:13 UTC | docker entrypoint catches interrupts | 26 October 2021, 14:09:13 UTC |
7b6fe45 | clevermx | 25 October 2021, 17:25:47 UTC | update preloaded session doc | 25 October 2021, 17:25:47 UTC |
86dd632 | clevermx | 25 October 2021, 17:10:17 UTC | add whole example into dontrun | 25 October 2021, 17:10:17 UTC |
19e41bf | clevermx | 25 October 2021, 16:44:38 UTC | Merge branch 'space_jobs' of ssh://git.jetbrains.space/ctlab/phantasus/phantasus into space_jobs | 25 October 2021, 16:44:38 UTC |
8aa72dd | clevermx | 25 October 2021, 16:39:15 UTC | Delete symlinks to logs | 25 October 2021, 16:39:15 UTC |
9093256 | Maksim Kleverov | 21 October 2021, 12:33:39 UTC | change apt to apt-get | 21 October 2021, 12:33:39 UTC |
d8a33b0 | Maksim Kleverov | 21 October 2021, 11:50:42 UTC | just print coverage, without sending | 21 October 2021, 11:50:42 UTC |
56686fa | Maksim Kleverov | 20 October 2021, 13:07:58 UTC | -y to firefox | 20 October 2021, 13:07:58 UTC |
c583de0 | Maksim Kleverov | 20 October 2021, 12:51:13 UTC | add firefox instalation -_- | 20 October 2021, 12:51:13 UTC |
8cd8f84 | Maksim Kleverov | 19 October 2021, 18:49:48 UTC | add -y to npm instalation | 19 October 2021, 18:49:48 UTC |
b0509a0 | Maksim Kleverov | 19 October 2021, 18:32:17 UTC | run tests of js and R in parallel | 19 October 2021, 18:32:17 UTC |
2acb8fa | Maksim Kleverov | 19 October 2021, 18:22:49 UTC | install bioccheck | 19 October 2021, 18:22:49 UTC |
0689398 | clevermx | 19 October 2021, 18:16:53 UTC | add firefox as js testing browser and other small fixes for tests | 19 October 2021, 18:16:53 UTC |
8bab52f | clevermx | 19 October 2021, 09:18:05 UTC | Merge branch 'space_jobs' of ssh://git.jetbrains.space/ctlab/phantasus/phantasus into space_jobs | 19 October 2021, 09:18:05 UTC |
1f6ce22 | clevermx | 19 October 2021, 09:14:04 UTC | fixes pass tests: fix loadGEO test with corresponding to new layout add otherOptions of convertByAnnotationDB in documentation | 19 October 2021, 09:14:04 UTC |
426d053 | Maksim Kleverov | 18 October 2021, 16:25:07 UTC | add docker build | 18 October 2021, 16:25:07 UTC |
38879f1 | Maksim Kleverov | 18 October 2021, 15:15:53 UTC | remove js test from R check | 18 October 2021, 15:15:53 UTC |
a4307ee | Maksim Kleverov | 18 October 2021, 15:03:47 UTC | add JS instalation | 18 October 2021, 15:03:47 UTC |
693adfa | Maksim Kleverov | 18 October 2021, 09:35:58 UTC | test conteiner env | 18 October 2021, 09:35:58 UTC |
7402ec5 | Maksim Kleverov | 18 October 2021, 08:54:57 UTC | fix path to shared file | 18 October 2021, 08:54:57 UTC |
a52dacc | Maksim Kleverov | 18 October 2021, 07:25:02 UTC | split job to steps (check shared files) | 18 October 2021, 07:25:02 UTC |
fd649a3 | Maksim Kleverov | 16 October 2021, 13:41:27 UTC | add tag to docker for now | 16 October 2021, 13:41:27 UTC |
cf6b452 | Maksim Kleverov | 16 October 2021, 13:34:03 UTC | probably fix startOn | 16 October 2021, 13:34:03 UTC |
27703d8 | Maksim Kleverov | 16 October 2021, 13:22:53 UTC | maybe fix quotes | 16 October 2021, 13:22:53 UTC |
f6beb9f | Maksim Kleverov | 16 October 2021, 13:15:10 UTC | fix quotes and return statOn condition | 16 October 2021, 13:15:10 UTC |
8dca547 | Maksim Kleverov | 16 October 2021, 13:11:38 UTC | remove start on push in preimage | 16 October 2021, 13:11:38 UTC |
1f39808 | Maksim Kleverov | 16 October 2021, 12:08:09 UTC | try to fix startOn for testing in preimage | 16 October 2021, 12:08:09 UTC |
089f42c | Maksim Kleverov | 16 October 2021, 11:59:02 UTC | add job that checks in preimage | 16 October 2021, 11:59:02 UTC |
bf29923 | clevermx | 16 October 2021, 10:58:42 UTC | add argument for external preimage | 16 October 2021, 10:58:42 UTC |
a76b58c | Alexey Sergushichev | 09 October 2021, 11:51:22 UTC | Add JBR badge | 09 October 2021, 11:51:22 UTC |
c6bb0e9 | Alexey Sergushichev | 02 July 2021, 13:19:49 UTC | Update js | 02 July 2021, 13:19:49 UTC |
0264dd6 | Alexey Sergushichev | 02 July 2021, 13:17:41 UTC | Annotations are transmitted with type information Co-authored-by: Maksim Kleverov <klevermx@gmail.com> | 02 July 2021, 13:17:41 UTC |
8e5506f | Alexey Sergushichev | 02 July 2021, 13:12:42 UTC | Merge branch 'master' of git.bioconductor.org:packages/phantasus | 02 July 2021, 13:12:42 UTC |
c7903d1 | Nitesh Turaga | 19 May 2021, 16:34:17 UTC | bump x.y.z version to odd y following creation of RELEASE_3_13 branch | 19 May 2021, 16:34:17 UTC |
e2115e2 | Nitesh Turaga | 19 May 2021, 16:34:17 UTC | bump x.y.z version to even y prior to creation of RELEASE_3_13 branch | 19 May 2021, 16:34:17 UTC |
9eeea5e | Alexey Sergushichev | 08 April 2021, 15:43:54 UTC | Update .travis.yml to fix osx builds (#159) | 08 April 2021, 15:43:54 UTC |
046f374 | Alexey Sergushichev | 08 April 2021, 13:01:42 UTC | update logos | 08 April 2021, 13:01:42 UTC |
9b78487 | Alexey Sergushichev | 12 March 2021, 14:29:14 UTC | Update .travis.yml don't test against bioc-devel | 12 March 2021, 14:29:14 UTC |
9240d9b | Alexey Sergushichev | 12 March 2021, 09:50:45 UTC | version bump | 12 March 2021, 09:50:45 UTC |
d807293 | Alexey Sergushichev | 12 March 2021, 09:47:37 UTC | Update JS: workaround for PHANTASUS-T-27 and fix for PHANTASUS-T-28 | 12 March 2021, 09:47:37 UTC |
f6c9356 | Alexey Sergushichev | 12 March 2021, 09:45:24 UTC | Add option for omitting ID versions Co-authored-by: Maksim Kleverov <klevermx@gmail.com> | 12 March 2021, 09:45:24 UTC |
ca6d6f8 | Alexey Sergushichev | 12 March 2021, 07:53:17 UTC | Merge branch 'master' of github.com:ctlab/phantasus | 12 March 2021, 07:53:17 UTC |
4d952be | Alexey Sergushichev | 11 March 2021, 16:07:36 UTC | update_js.sh script takes phantasus.js dir | 11 March 2021, 16:07:36 UTC |
3060d2b | Nitesh Turaga | 27 October 2020, 15:33:27 UTC | bump x.y.z version to odd y following creation of RELEASE_3_12 branch | 27 October 2020, 15:33:27 UTC |
efcdf05 | Nitesh Turaga | 27 October 2020, 15:33:27 UTC | bump x.y.z version to even y prior to creation of RELEASE_3_12 branch | 27 October 2020, 15:33:27 UTC |
84076a6 | Alexey Sergushichev | 21 October 2020, 13:33:52 UTC | Example fix | 21 October 2020, 13:33:52 UTC |
e7501bc | Alexey Sergushichev | 21 October 2020, 12:43:55 UTC | curl import | 21 October 2020, 12:43:55 UTC |
0eb6552 | Alexey Sergushichev | 21 October 2020, 12:41:09 UTC | missed file | 21 October 2020, 12:41:09 UTC |
686c52a | Alexey Sergushichev | 21 October 2020, 12:06:32 UTC | version bump | 21 October 2020, 12:06:32 UTC |
5a1f686 | Alexey Sergushichev | 30 September 2020, 12:26:01 UTC | Update JS | 30 September 2020, 12:26:01 UTC |
8d87c9a | Alexey Sergushichev | 30 September 2020, 12:07:34 UTC | Backend for preloaded sessions | 30 September 2020, 12:07:34 UTC |
0ff160a | Alexey Sergushichev | 21 July 2020, 08:50:36 UTC | fix locale problems in Dockerfile | 21 July 2020, 08:50:36 UTC |
196f3db | Alexey Sergushichev | 20 July 2020, 21:37:31 UTC | version bump | 20 July 2020, 21:37:31 UTC |
1736b06 | Alexey Sergushichev | 20 July 2020, 21:35:05 UTC | changed port in docker compose | 20 July 2020, 21:35:05 UTC |
8788845 | Alexey Sergushichev | 20 July 2020, 11:08:25 UTC | fix documentation for write.gct | 20 July 2020, 11:08:25 UTC |
a6e0738 | Alexey Sergushichev | 20 July 2020, 10:24:22 UTC | Nginx workser to 2, refactor configs a bit | 20 July 2020, 10:24:22 UTC |
5a0c839 | Alexey Sergushichev | 09 July 2020, 11:36:12 UTC | remove entrypoint.sh from dockerignore | 09 July 2020, 11:36:12 UTC |
1f0bbbb | Alexey Sergushichev | 09 July 2020, 09:33:43 UTC | missed copying docker-entrypoint.sh | 09 July 2020, 09:33:43 UTC |
d57fe7b | Alexey Sergushichev | 08 July 2020, 21:12:34 UTC | missed file | 08 July 2020, 21:12:34 UTC |
78d905c | Alexey Sergushichev | 08 July 2020, 16:47:36 UTC | fix order | 08 July 2020, 16:47:36 UTC |
a76fa60 | Alexey Sergushichev | 08 July 2020, 16:03:02 UTC | Merge branch 'master' into develop | 08 July 2020, 16:03:02 UTC |
5766032 | Alexey Sergushichev | 08 July 2020, 15:27:21 UTC | Dockerfile with rApache | 08 July 2020, 15:27:21 UTC |