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Revision 66357a4654bfe45c5fe4a9565bdf67d7b5a6f05c authored by clevermx on 18 January 2022, 11:09:39 UTC, committed by Space on 18 January 2022, 11:09:39 UTC 
Modify counts processing in order to support additional collections (not only ARCHs4).
 
Add meta-files generation for new counts processing.
Add support for 8+ versions of ARCHs4.

Co-authored-by: Alexey Sergushichev <alserg@itmo.ru>
Merge-request: PHANTASUS-MR-21
Merged-by: Maksim Kleverov <klevermx@gmail.com>
1 parent d230978
Raw File
renameColumn.R 
renameColumn <- function (es, isFeature = TRUE, oldName, newName) {
    if (isFeature) {
        fData(es)[[newName]] <- fData(es)[[oldName]]
        fData(es)[[oldName]] <- NULL
    } else {
        phenoData(es)[[newName]] <- phenoData(es)[[oldName]]
        phenoData(es)[[oldName]] <- NULL
    }

    assign("es", es, envir = parent.frame())
}
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