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Revision Author Date Message Commit Date
66357a4 Modify counts processing in order to support additional collections (not only ARCHs4). Add meta-files generation for new counts processing. Add support for 8+ versions of ARCHs4. Co-authored-by: Alexey Sergushichev <alserg@itmo.ru> Merge-request: PHANTASUS-MR-21 Merged-by: Maksim Kleverov <klevermx@gmail.com> 18 January 2022, 11:09:39 UTC
d230978 Fix PHANTASUS-T-48 30 November 2021, 13:04:04 UTC
5bcaa19 bump version in js 13 November 2021, 18:46:20 UTC
a83f5d4 version bump 13 November 2021, 18:43:28 UTC
f60223b check correctness of GSE ID before download 04 November 2021, 12:25:10 UTC
e88df20 workaround for seandavi/GEOquery #120 04 November 2021, 12:24:44 UTC
8c06bbe fix load of GPL soft files 04 November 2021, 10:17:26 UTC
669840a space.kts fixes 02 November 2021, 18:02:25 UTC
11b7294 update js 02 November 2021, 18:01:18 UTC
aa2dee3 fix some test warnings 02 November 2021, 17:30:47 UTC
9ca07de testing correctness of versions in static files 02 November 2021, 17:30:24 UTC
bc79a9b version bump 01 November 2021, 18:05:43 UTC
75da639 Merge branch 'space_jobs' 01 November 2021, 18:04:03 UTC
9ce860a Merge branch 'master' of git.bioconductor.org:packages/phantasus 01 November 2021, 17:47:58 UTC
dfd4b41 update js 01 November 2021, 16:42:57 UTC
b02f634 fix commit id generation for update_js.sh 01 November 2021, 16:42:37 UTC
9ba9b97 bump x.y.z version to odd y following creation of RELEASE_3_14 branch 26 October 2021, 16:42:56 UTC
26a4f40 bump x.y.z version to even y prior to creation of RELEASE_3_14 branch 26 October 2021, 16:42:56 UTC
294a0fd docker entrypoint catches interrupts 26 October 2021, 14:09:13 UTC
7b6fe45 update preloaded session doc 25 October 2021, 17:25:47 UTC
86dd632 add whole example into dontrun 25 October 2021, 17:10:17 UTC
19e41bf Merge branch 'space_jobs' of ssh://git.jetbrains.space/ctlab/phantasus/phantasus into space_jobs 25 October 2021, 16:44:38 UTC
8aa72dd Delete symlinks to logs 25 October 2021, 16:39:15 UTC
9093256 change apt to apt-get 21 October 2021, 12:33:39 UTC
d8a33b0 just print coverage, without sending 21 October 2021, 11:50:42 UTC
56686fa -y to firefox 20 October 2021, 13:07:58 UTC
c583de0 add firefox instalation -_- 20 October 2021, 12:51:13 UTC
8cd8f84 add -y to npm instalation 19 October 2021, 18:49:48 UTC
b0509a0 run tests of js and R in parallel 19 October 2021, 18:32:17 UTC
2acb8fa install bioccheck 19 October 2021, 18:22:49 UTC
0689398 add firefox as js testing browser and other small fixes for tests 19 October 2021, 18:16:53 UTC
8bab52f Merge branch 'space_jobs' of ssh://git.jetbrains.space/ctlab/phantasus/phantasus into space_jobs 19 October 2021, 09:18:05 UTC
1f6ce22 fixes pass tests: fix loadGEO test with corresponding to new layout add otherOptions of convertByAnnotationDB in documentation 19 October 2021, 09:14:04 UTC
426d053 add docker build 18 October 2021, 16:25:07 UTC
38879f1 remove js test from R check 18 October 2021, 15:15:53 UTC
a4307ee add JS instalation 18 October 2021, 15:03:47 UTC
693adfa test conteiner env 18 October 2021, 09:35:58 UTC
7402ec5 fix path to shared file 18 October 2021, 08:54:57 UTC
a52dacc split job to steps (check shared files) 18 October 2021, 07:25:02 UTC
fd649a3 add tag to docker for now 16 October 2021, 13:41:27 UTC
cf6b452 probably fix startOn 16 October 2021, 13:34:03 UTC
27703d8 maybe fix quotes 16 October 2021, 13:22:53 UTC
f6beb9f fix quotes and return statOn condition 16 October 2021, 13:15:10 UTC
8dca547 remove start on push in preimage 16 October 2021, 13:11:38 UTC
1f39808 try to fix startOn for testing in preimage 16 October 2021, 12:08:09 UTC
089f42c add job that checks in preimage 16 October 2021, 11:59:02 UTC
bf29923 add argument for external preimage 16 October 2021, 10:58:42 UTC
a76b58c Add JBR badge 09 October 2021, 11:51:22 UTC
c6bb0e9 Update js 02 July 2021, 13:19:49 UTC
0264dd6 Annotations are transmitted with type information Co-authored-by: Maksim Kleverov <klevermx@gmail.com> 02 July 2021, 13:17:41 UTC
8e5506f Merge branch 'master' of git.bioconductor.org:packages/phantasus 02 July 2021, 13:12:42 UTC
c7903d1 bump x.y.z version to odd y following creation of RELEASE_3_13 branch 19 May 2021, 16:34:17 UTC
e2115e2 bump x.y.z version to even y prior to creation of RELEASE_3_13 branch 19 May 2021, 16:34:17 UTC
9eeea5e Update .travis.yml to fix osx builds (#159) 08 April 2021, 15:43:54 UTC
046f374 update logos 08 April 2021, 13:01:42 UTC
9b78487 Update .travis.yml don't test against bioc-devel 12 March 2021, 14:29:14 UTC
9240d9b version bump 12 March 2021, 09:50:45 UTC
d807293 Update JS: workaround for PHANTASUS-T-27 and fix for PHANTASUS-T-28 12 March 2021, 09:47:37 UTC
f6c9356 Add option for omitting ID versions Co-authored-by: Maksim Kleverov <klevermx@gmail.com> 12 March 2021, 09:45:24 UTC
ca6d6f8 Merge branch 'master' of github.com:ctlab/phantasus 12 March 2021, 07:53:17 UTC
4d952be update_js.sh script takes phantasus.js dir 11 March 2021, 16:07:36 UTC
3060d2b bump x.y.z version to odd y following creation of RELEASE_3_12 branch 27 October 2020, 15:33:27 UTC
efcdf05 bump x.y.z version to even y prior to creation of RELEASE_3_12 branch 27 October 2020, 15:33:27 UTC
84076a6 Example fix 21 October 2020, 13:33:52 UTC
e7501bc curl import 21 October 2020, 12:43:55 UTC
0eb6552 missed file 21 October 2020, 12:41:09 UTC
686c52a version bump 21 October 2020, 12:06:32 UTC
5a1f686 Update JS 30 September 2020, 12:26:01 UTC
8d87c9a Backend for preloaded sessions 30 September 2020, 12:07:34 UTC
0ff160a fix locale problems in Dockerfile 21 July 2020, 08:50:36 UTC
196f3db version bump 20 July 2020, 21:37:31 UTC
1736b06 changed port in docker compose 20 July 2020, 21:35:05 UTC
8788845 fix documentation for write.gct 20 July 2020, 11:08:25 UTC
a6e0738 Nginx workser to 2, refactor configs a bit 20 July 2020, 10:24:22 UTC
5a0c839 remove entrypoint.sh from dockerignore 09 July 2020, 11:36:12 UTC
1f0bbbb missed copying docker-entrypoint.sh 09 July 2020, 09:33:43 UTC
d57fe7b missed file 08 July 2020, 21:12:34 UTC
78d905c fix order 08 July 2020, 16:47:36 UTC
a76fa60 Merge branch 'master' into develop 08 July 2020, 16:03:02 UTC
5766032 Dockerfile with rApache 08 July 2020, 15:27:21 UTC
24584c8 version bump 30 May 2020, 12:33:15 UTC
42f1e47 version bump 25 May 2020, 08:51:51 UTC
75e9b76 Merge branch 'master' of github.com:ctlab/phantasus 25 May 2020, 08:50:37 UTC
2e41a62 checking number of selected rows on row profile start 23 May 2020, 10:05:33 UTC
8023a5f Travis fix 1 (#154) * Update .travis.yml 13 May 2020, 17:56:06 UTC
5ae6e3d Update appveyor.yml 13 May 2020, 12:31:17 UTC
65ff2d0 Update appveyor.yml 13 May 2020, 12:15:39 UTC
75e2789 Update README.md 13 May 2020, 12:11:46 UTC
59194a6 remove osx bioc-devl from travis matrix 13 May 2020, 12:06:35 UTC
62b87fd Update README.md 13 May 2020, 12:00:52 UTC
c40cd66 Even more proper image 13 May 2020, 11:04:52 UTC
ed60429 Proper image link 13 May 2020, 11:03:57 UTC
bcd9d80 Merge branch 'master' of git.bioconductor.org:packages/phantasus 13 May 2020, 11:00:43 UTC
5dfce1d update README 13 May 2020, 11:00:21 UTC
6fe2980 bump x.y.z version to odd y following creation of RELEASE_3_11 branch 27 April 2020, 19:14:57 UTC
fe9c382 bump x.y.z version to even y prior to creation of RELEASE_3_11 branch 27 April 2020, 19:14:57 UTC
59fd34f eps -> absEps for compatibility with current bioc-release 18 March 2020, 18:53:55 UTC
77806dd version bump 18 March 2020, 17:41:32 UTC
e1e99bd warning fixes 18 March 2020, 17:41:05 UTC
d2a4ccf fix error in loadGSE due to stringAsFactors=FALSE 18 March 2020, 17:40:49 UTC
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