| 69c7ae2 | AlexFletcher | 07 July 2023, 11:26:18 UTC | Implement changes requested by @mirams | 07 July 2023, 11:26:18 UTC |
| 991c03a | AlexFletcher | 04 July 2023, 12:51:37 UTC | Minor tidying | 04 July 2023, 12:51:37 UTC |
| 4f60d98 | AlexFletcher | 04 July 2023, 12:11:17 UTC | Merge branch 'develop' into ticket_3107 | 04 July 2023, 12:11:17 UTC |
| 8fff206 | Alex Fletcher | 30 June 2023, 13:52:18 UTC | Merge pull request #131 from Chaste/130-small-changes-to-cell Make small changes to Cell.hpp | 30 June 2023, 13:52:18 UTC |
| ff44168 | Alex Fletcher | 30 June 2023, 09:58:58 UTC | Merge pull request #126 from Chaste/121-extend-celldata 121 extend celldata | 30 June 2023, 09:58:58 UTC |
| b40ea0d | AlexFletcher | 30 June 2023, 09:15:49 UTC | Make small changes to Cell.hpp | 30 June 2023, 09:15:49 UTC |
| 26bd2ad | Fergus Cooper | 28 June 2023, 15:49:07 UTC | Use new chaste/runner:oldest-boost tag | 28 June 2023, 15:49:07 UTC |
| b9ba8af | Fergus Cooper | 28 June 2023, 12:58:58 UTC | Rename regenerate-arhive.yml to regenerate-archive.yml d'oh | 28 June 2023, 12:58:58 UTC |
| 5fd45bf | Fergus Cooper | 28 June 2023, 12:55:30 UTC | Merge pull request #128 from Chaste/regenerate-archive Add workflow to regenerate and upload crypt archive | 28 June 2023, 12:55:30 UTC |
| 59fb194 | Fergus Cooper | 28 June 2023, 12:53:34 UTC | remove unnecessary conditional | 28 June 2023, 12:53:34 UTC |
| 3709bcb | Fergus Cooper | 28 June 2023, 12:51:15 UTC | only run on workflow dispatch | 28 June 2023, 12:51:15 UTC |
| 83ce336 | Fergus Cooper | 28 June 2023, 12:23:22 UTC | Add workflow to regenerate and upload crypt archive | 28 June 2023, 12:23:22 UTC |
| ebdf746 | AlexFletcher | 27 June 2023, 14:58:24 UTC | Remove redundant ConstantTargetAreaModifier and update comments | 27 June 2023, 14:58:24 UTC |
| ca4edc2 | AlexFletcher | 27 June 2023, 12:32:51 UTC | Remove requirement of target area modifier when using vertex model force classes | 27 June 2023, 12:32:51 UTC |
| 42301a2 | Joe Pitt-Francis | 27 June 2023, 11:35:47 UTC | Merge pull request #115 from Chaste/issue_100 Issue 100 | 27 June 2023, 11:35:47 UTC |
| 0a221d2 | Fergus Cooper | 27 June 2023, 11:31:12 UTC | Merge pull request #117 from Chaste/remove-intel-classic Remove classic intel compiler from all workflows | 27 June 2023, 11:31:12 UTC |
| cc10b6a | AlexFletcher | 27 June 2023, 08:53:17 UTC | Add function HasItem() to CellData | 27 June 2023, 08:53:17 UTC |
| 032b31a | Fergus Cooper | 27 June 2023, 08:48:35 UTC | Merge pull request #123 from Chaste/codegen-version Fix codegen version overhead | 27 June 2023, 08:48:35 UTC |
| 0235b21 | Alex Fletcher | 27 June 2023, 08:18:06 UTC | Merge pull request #120 from Chaste/118-rng-archiving-cell-cycle-models #118 make RNG archiving consistent across CCMs | 27 June 2023, 08:18:06 UTC |
| c263488 | Fergus Cooper | 26 June 2023, 16:46:16 UTC | Replace Version with Version_cmake and tidy refs | 26 June 2023, 16:46:16 UTC |
| 169aa39 | Fergus Cooper | 26 June 2023, 16:45:47 UTC | Report codegen version in cmake | 26 June 2023, 16:45:47 UTC |
| 1561fe8 | Joe Pitt-Francis | 26 June 2023, 10:44:26 UTC | #100 Missed these redundant lines | 26 June 2023, 10:44:26 UTC |
| f619a99 | Joe Pitt-Francis | 26 June 2023, 09:02:00 UTC | Merge branch 'develop' into issue_100 | 26 June 2023, 09:02:00 UTC |
| ed3ffe2 | Joe Pitt-Francis | 26 June 2023, 09:01:45 UTC | #100 Remove redundant header file | 26 June 2023, 09:01:45 UTC |
| 39122fa | AlexFletcher | 25 June 2023, 18:59:48 UTC | #118 make archiving of RandomNumberGenerator singleton consistent across stochastic cell-cycle models | 25 June 2023, 18:59:48 UTC |
| ddb0ecb | Joe Pitt-Francis | 23 June 2023, 12:44:31 UTC | #100 Fix coverage - this code is no longer needed | 23 June 2023, 12:44:31 UTC |
| 098683a | Fergus Cooper | 23 June 2023, 10:07:17 UTC | Remove classic intel compiler from all workflows | 23 June 2023, 10:07:17 UTC |
| a4f3892 | Joe Pitt-Francis | 23 June 2023, 09:06:37 UTC | #100 make corner-case exception into assertion and remove ancient trace | 23 June 2023, 09:06:37 UTC |
| 7d4b2f1 | Joe Pitt-Francis | 23 June 2023, 08:45:38 UTC | #100 Tidy historical comments | 23 June 2023, 08:45:38 UTC |
| 4f9c2ef | Fergus Cooper | 22 June 2023, 17:43:12 UTC | Merge pull request #108 from Chaste/fix_build Full suite of CI is now working. | 22 June 2023, 17:43:12 UTC |
| ee40438 | Joe Pitt-Francis | 22 June 2023, 15:09:29 UTC | #100 Erase mentions of boost::filesystem | 22 June 2023, 15:09:29 UTC |
| 7c2b9ef | Joe Pitt-Francis | 22 June 2023, 14:31:56 UTC | #100 Switch over to std::filesystem | 22 June 2023, 14:31:56 UTC |
| 8551d22 | Joe Pitt-Francis | 22 June 2023, 14:29:40 UTC | #100 Fix the double negative in the exception | 22 June 2023, 14:29:40 UTC |
| c5f8ca6 | Joe Pitt-Francis | 22 June 2023, 14:04:35 UTC | #100 Update all deprecated boost::filesystem names (so that they're more similar to C++17 std::filesystem names) | 22 June 2023, 14:04:35 UTC |
| c28ac33 | Fergus Cooper | 22 June 2023, 11:53:19 UTC | Remove trace and revert to full testing | 22 June 2023, 11:53:19 UTC |
| 2394b08 | Fergus Cooper | 22 June 2023, 11:20:51 UTC | Merge pull request #114 from Chaste/intel-failure More investigation into build failures | 22 June 2023, 11:20:51 UTC |
| fef200f | Fergus Cooper | 22 June 2023, 10:31:36 UTC | Add check for petsc tools exception back in | 22 June 2023, 10:31:36 UTC |
| cce82e3 | Fergus Cooper | 21 June 2023, 13:56:51 UTC | Add trace, and run failing tests only | 21 June 2023, 13:56:51 UTC |
| 7f22d0a | Fergus Cooper | 20 June 2023, 16:41:12 UTC | Merge pull request #112 from Chaste/intel-failure Resolve issues with the Intel compiler | 20 June 2023, 16:41:12 UTC |
| 592460c | Fergus Cooper | 20 June 2023, 16:39:49 UTC | Return workflow to original state | 20 June 2023, 16:39:49 UTC |
| 500accd | Fergus Cooper | 20 June 2023, 16:16:01 UTC | Fix warning emitted due to missing project directive | 20 June 2023, 16:16:01 UTC |
| 6662967 | Fergus Cooper | 20 June 2023, 16:15:15 UTC | Ensure dynamic Heart sources are built with tests that need them | 20 June 2023, 16:15:15 UTC |
| 9c5fa4e | Fergus Cooper | 20 June 2023, 16:14:29 UTC | Run just the specific TestDynamicallyLoadedCellModels | 20 June 2023, 16:14:29 UTC |
| 6205d39 | Fergus Cooper | 20 June 2023, 13:30:47 UTC | Revert to older test behaviour now Intel uses precise fp model | 20 June 2023, 13:30:47 UTC |
| 8f29159 | Fergus Cooper | 20 June 2023, 13:30:15 UTC | Add test output directory to build info | 20 June 2023, 13:30:15 UTC |
| e619123 | Fergus Cooper | 20 June 2023, 11:20:44 UTC | Fix syntax: need newlines | 20 June 2023, 11:20:44 UTC |
| 581cc90 | Fergus Cooper | 20 June 2023, 10:59:09 UTC | Test just dynamically loaded cell models | 20 June 2023, 10:59:09 UTC |
| 5a63d3a | Fergus Cooper | 20 June 2023, 10:59:00 UTC | Add -fp-model precise to Intel dynamic compilation | 20 June 2023, 10:59:00 UTC |
| 885b4e2 | Fergus Cooper | 20 June 2023, 09:33:32 UTC | Only run the failing test | 20 June 2023, 09:33:32 UTC |
| 726a5ad | Fergus Cooper | 20 June 2023, 09:32:10 UTC | Stop Intel compiler optimizing the work away | 20 June 2023, 09:32:10 UTC |
| df7f459 | Fergus Cooper | 19 June 2023, 17:14:16 UTC | Return test pack to usual state. | 19 June 2023, 17:14:16 UTC |
| 8699d9b | Fergus Cooper | 19 June 2023, 17:13:24 UTC | Turn on -fp-model precise by default for Intel compiler | 19 June 2023, 17:13:24 UTC |
| a84a782 | Fergus Cooper | 19 June 2023, 16:52:16 UTC | Check test status in precise fp model | 19 June 2023, 16:52:16 UTC |
| 21e971b | Fergus Cooper | 19 June 2023, 16:32:18 UTC | Reduce scope to specific failing tests | 19 June 2023, 16:32:18 UTC |
| dae561b | Fergus Cooper | 19 June 2023, 14:39:05 UTC | Start investigating intel failure in more detail | 19 June 2023, 14:39:05 UTC |
| 83e69e1 | Fergus Cooper | 19 June 2023, 12:56:04 UTC | Temporarily remove Intel compiler in Ubuntu tests | 19 June 2023, 12:56:04 UTC |
| 27c15ce | Fergus Cooper | 19 June 2023, 12:55:41 UTC | Remove trace | 19 June 2023, 12:55:41 UTC |
| b07bf68 | Fergus Cooper | 19 June 2023, 10:13:55 UTC | Update error message to catch other Chaste PETSc errors | 19 June 2023, 10:13:55 UTC |
| 14a43a8 | Fergus Cooper | 16 June 2023, 12:49:28 UTC | Add some trace to see what's happening on CI machine | 16 June 2023, 12:49:28 UTC |
| c5571ce | Fergus Cooper | 16 June 2023, 11:09:15 UTC | Exceptions will not be thrown from [0] but from the function call | 16 June 2023, 11:09:15 UTC |
| 14250e8 | Fergus Cooper | 16 June 2023, 11:05:52 UTC | Third possible exception | 16 June 2023, 11:05:52 UTC |
| 3e4fec6 | Fergus Cooper | 16 June 2023, 10:58:51 UTC | Check one of two exceptions is thrown | 16 June 2023, 10:58:51 UTC |
| 4830388 | Joe Pitt-Francis | 15 June 2023, 17:46:40 UTC | Fix test in Intel Production by slacking the tolerance (difference at end of string is ~3e-12 in Intel) | 15 June 2023, 17:46:40 UTC |
| 5bd97e6 | Joe Pitt-Francis | 15 June 2023, 17:08:24 UTC | Fix test by allowing the KSP absolute tolerance to be a bit more slack | 15 June 2023, 17:08:24 UTC |
| 3086da3 | Fergus Cooper | 15 June 2023, 16:24:01 UTC | Reduce disk space warning level | 15 June 2023, 16:24:01 UTC |
| ac45edf | Fergus Cooper | 15 June 2023, 15:30:43 UTC | Modernise python test runner | 15 June 2023, 15:30:43 UTC |
| f54b7de | Fergus Cooper | 15 June 2023, 15:30:24 UTC | Exception not coming from the [0] | 15 June 2023, 15:30:24 UTC |
| d10aa24 | Fergus Cooper | 15 June 2023, 11:00:41 UTC | Exception is not coming from the size() method | 15 June 2023, 11:00:41 UTC |
| f4341fc | Fergus Cooper | 15 June 2023, 10:39:35 UTC | Ignore branch with USER, as coverage uses Docker with no USER | 15 June 2023, 10:39:35 UTC |
| 43ea1cc | Fergus Cooper | 15 June 2023, 10:38:44 UTC | Ignore coverage on warnings: Hypre is installed on coverage builds | 15 June 2023, 10:38:44 UTC |
| e887c52 | Fergus Cooper | 14 June 2023, 15:23:06 UTC | Do not warn about attributes | 14 June 2023, 15:23:06 UTC |
| 214c7e1 | Fergus Cooper | 14 June 2023, 13:59:13 UTC | Turn on C++17 properly | 14 June 2023, 13:59:29 UTC |
| 152f579 | Fergus Cooper | 14 June 2023, 13:14:31 UTC | Merge branch 'ci_fixes' into fix_build | 14 June 2023, 13:14:31 UTC |
| 678e542 | Fergus Cooper | 14 June 2023, 13:14:06 UTC | Merge branch 'develop' into fix_build | 14 June 2023, 13:14:06 UTC |
| 5a45eaf | Fergus Cooper | 14 June 2023, 13:12:37 UTC | Tidy and some more [[maybe_unused]] | 14 June 2023, 13:12:37 UTC |
| c36e442 | Joe Pitt-Francis | 14 June 2023, 13:10:06 UTC | Merge pull request #109 from Chaste/auatay_ticket_2987_ode_edges Fix archive (and the instructions for building it correctly) | 14 June 2023, 13:10:06 UTC |
| 26a91df | Fergus Cooper | 14 June 2023, 13:04:13 UTC | Add pycache to gitignore | 14 June 2023, 13:04:13 UTC |
| 421fe3c | Fergus Cooper | 14 June 2023, 11:31:13 UTC | Add [[maybe_unused]] attributes in conjunction with if constexpr | 14 June 2023, 13:01:43 UTC |
| 2db6345 | Fergus Cooper | 14 June 2023, 11:21:52 UTC | Remove OS no longer supported by GitHub | 14 June 2023, 13:01:43 UTC |
| f565bb6 | Fergus Cooper | 14 June 2023, 11:20:43 UTC | Use same pattern in <2, 2> case as <n, 2> case | 14 June 2023, 13:01:43 UTC |
| f47e917 | Joe Pitt-Francis | 14 June 2023, 12:12:35 UTC | Fix archive (and the instructions for building it correctly) | 14 June 2023, 12:12:35 UTC |
| 00798d1 | AlexFletcher | 13 June 2023, 21:31:14 UTC | Merge branch 'fix_build' of github.com:Chaste/Chaste into fix_build | 13 June 2023, 21:31:14 UTC |
| 9d1cad2 | AlexFletcher | 13 June 2023, 21:30:41 UTC | Turn some more assertions regarding dimensions into conditionals with if constexpr | 13 June 2023, 21:30:41 UTC |
| d793e60 | Fergus Cooper | 13 June 2023, 17:34:18 UTC | Resolve more c_vector access issues in mesh class | 13 June 2023, 17:34:18 UTC |
| d9c5699 | Fergus Cooper | 13 June 2023, 16:29:43 UTC | Use if constexpr to correct out of bounds c_vector accesses | 13 June 2023, 16:29:43 UTC |
| 1f51426 | Fergus Cooper | 13 June 2023, 16:28:11 UTC | Turn on C++17 and update CMake minimum based on Ubuntu 20.04 version | 13 June 2023, 16:28:11 UTC |
| e42db5f | AlexFletcher | 13 June 2023, 08:55:35 UTC | Fix small error in TestEdge.hpp | 13 June 2023, 08:55:35 UTC |
| cf4eb01 | Fergus Cooper | 12 June 2023, 15:21:22 UTC | Merge pull request #56 from Chaste/auatay_ticket_2987_ode_edges Auatay ticket 2987 ode edges | 12 June 2023, 15:21:22 UTC |
| 9c9ad0a | Fergus Cooper | 12 June 2023, 15:17:38 UTC | Merge branch 'develop' into auatay_ticket_2987_ode_edges | 12 June 2023, 15:17:38 UTC |
| 1c97d5d | Fergus Cooper | 12 June 2023, 15:14:46 UTC | Fix coverage | 12 June 2023, 15:14:46 UTC |
| fbfa433 | Fergus Cooper | 12 June 2023, 15:14:26 UTC | Clear method is never used, appears unnecessary | 12 June 2023, 15:14:26 UTC |
| 5657fc4 | Alex Fletcher | 12 June 2023, 10:57:17 UTC | Merge pull request #104 from Chaste/103-bbr-wp-41-barcelona 103 bbr wp 41 barcelona | 12 June 2023, 10:57:17 UTC |
| ba5af3c | AlexFletcher | 10 June 2023, 13:38:34 UTC | Fix coverage | 10 June 2023, 13:38:34 UTC |
| 1d26f56 | AlexFletcher | 09 June 2023, 14:43:44 UTC | Add further cell-based functionality | 09 June 2023, 14:43:44 UTC |
| 7c17b9b | Fergus Cooper | 09 June 2023, 13:59:47 UTC | Node does not need to know about edges | 09 June 2023, 13:59:47 UTC |
| aec4fb8 | Joe Pitt-Francis | 08 June 2023, 14:51:04 UTC | Refresh archive with an older version of Boost | 08 June 2023, 14:51:04 UTC |
| 621369d | AlexFletcher | 08 June 2023, 12:37:00 UTC | Add SlidingBoundaryCondition class | 08 June 2023, 12:37:00 UTC |
| 2eb3df6 | AlexFletcher | 08 June 2023, 10:44:57 UTC | Create ConstantTargetAreaModifier (needed when using e.g. FarhadifarForce but not wanting any cell growth) | 08 June 2023, 10:44:57 UTC |
| c4d7b52 | AlexFletcher | 08 June 2023, 10:20:55 UTC | Strengthen tests of DivisionBiasTrackingModifier | 08 June 2023, 10:20:55 UTC |
| cda4117 | AlexFletcher | 07 June 2023, 21:12:09 UTC | Create classes BiasedBernoulliTrialCellCycleModel and DivisionBiasTrackingModifier | 07 June 2023, 21:12:09 UTC |
