https://github.com/galaxyproject/galaxy

sort by:
Revision Author Date Message Commit Date
6e7160b Merge pull request #18197 from nsoranzo/update_actions Update versions of GitHub actions 22 May 2024, 07:58:17 UTC
4cf305c Use official minikube GitHub action Cannot used the new default driver (`docker`) as it crashes the PostgreSQL Docker container started via job services. 21 May 2024, 22:37:40 UTC
94de628 Update versions of GitHub actions 21 May 2024, 11:45:57 UTC
4b4a649 Use job permissions instead of token 21 May 2024, 11:40:22 UTC
5ac64c8 Remove unnecessary workflow input The branch to run from can be selected from the standard parameters when running a GitHub workflow manually. 21 May 2024, 11:31:30 UTC
55a9b9d Update commit message and PR title 21 May 2024, 11:29:56 UTC
b56640d Cancel in-progress concurrent builds 21 May 2024, 11:27:51 UTC
33380f9 Merge pull request #18186 from jdavcs/dev_milestone Change default milestone to target 24.2 21 May 2024, 06:51:53 UTC
bc84ee0 Merge pull request #18185 from jdavcs/version-24.2.dev Update version to 24.2.dev 21 May 2024, 06:51:32 UTC
0c964b8 Change default milestone to target 24.2 21 May 2024, 02:05:21 UTC
2514dee Merge branch 'release_24.1' into 'dev' 21 May 2024, 01:48:58 UTC
4555b91 Update version to 24.1.rc1 21 May 2024, 01:48:58 UTC
9c6caf3 Update version to 24.2.dev0 21 May 2024, 01:48:58 UTC
d6d3aa5 Merge remote-tracking branch 'upstream/release_24.0' into dev 21 May 2024, 01:43:14 UTC
e796826 Merge pull request #18183 from jdavcs/dev_dbtags Update db revision 24.1 release tags 21 May 2024, 00:49:02 UTC
397b575 Update db revision 24.1 release tags 21 May 2024, 00:43:19 UTC
37551f5 Merge pull request #18181 from jdavcs/240_release_docs_fix [24.0] Fix typos in create release documentation page 20 May 2024, 20:46:21 UTC
396797d Fix typos in release documentation 20 May 2024, 18:57:49 UTC
177afd4 Merge pull request #18172 from jmchilton/file_source_templates_2 Harden User Object Store and File Source Creation 20 May 2024, 18:29:25 UTC
9b6268b Merge pull request #18127 from jmchilton/file_source_templates Empower Users to Bring Their Own Storage and File Sources 20 May 2024, 18:23:04 UTC
f3cb81d Merge pull request #18180 from ahmedhamidawan/enhance_invocations_panel Improve Invocations panel 20 May 2024, 18:16:28 UTC
d44cc92 show message for no invocations 20 May 2024, 16:51:32 UTC
2a92bc1 Test user config objects before creating them. Provide detailed error message before proceeding with creation. 20 May 2024, 16:19:49 UTC
5cca011 Return 204 instead of null from new DELETE endpoints. Again thanks to David! 20 May 2024, 16:19:02 UTC
5ab6a42 As pointed out by David - doc is optional in plugin, should be in the schema. 20 May 2024, 16:19:01 UTC
e86ab18 Harden boto3 object store config handling. 20 May 2024, 16:19:01 UTC
71ca3d6 Fix for boto3 user defined object stores. 20 May 2024, 16:19:01 UTC
91a3253 Fix filtering in file sources grid. 20 May 2024, 16:19:01 UTC
b598bff Big warning box about distributed object stores being required. 20 May 2024, 16:19:01 UTC
887d26c Revise buttons in ConfigTemplates, fill out remove functionality. 20 May 2024, 16:19:01 UTC
21ff621 More explicit typing around form stuff in config template management. Add URLs where I have them in the dropdown. 20 May 2024, 16:19:01 UTC
29ea0ba Implement many PR comments around Vue stuff and docs. 20 May 2024, 16:19:01 UTC
f95da89 Implement file source templates 20 May 2024, 16:18:47 UTC
1523ceb Migration for user file source templates. 20 May 2024, 16:16:02 UTC
d313d67 Refine object store templates backend. 20 May 2024, 16:16:02 UTC
d3991a6 Object Store creation templates. 20 May 2024, 16:16:02 UTC
c1f8121 Migration for user defined object stores. 20 May 2024, 16:16:02 UTC
2f43c32 Merge pull request #18003 from mvdbeek/add_galaxy_to_user_agent Add galaxy to user agent 20 May 2024, 16:14:13 UTC
4296472 Merge pull request #18174 from jmchilton/onedata_deduplication De-duplication of onedata objectstore code. 20 May 2024, 16:09:10 UTC
3f82a74 Merge pull request #17586 from wm75/empty-bed-lines-fix Set minimal metadata also for empty bed datasets 20 May 2024, 15:53:28 UTC
349f9e2 Merge pull request #18177 from mvdbeek/dev Merge 24.0 into dev 20 May 2024, 15:13:11 UTC
1d345d6 Merge pull request #18074 from hujambo-dunia/enhance-form-drilldown Enhance form drilldown 20 May 2024, 14:54:29 UTC
9843034 Merge pull request #18137 from ahmedhamidawan/invocations_panel Add an Invocations Panel for the Invocations activity 20 May 2024, 14:44:57 UTC
036bf47 Merge pull request #18173 from nsoranzo/followup_on_18136 Fix boto3-stubs typecheck dependency 20 May 2024, 14:43:55 UTC
e46bed1 Merge pull request #18178 from mvdbeek/downgrade_expected_slurm_things [24.0] Emit warning when user-cancelled job already complete 20 May 2024, 14:41:33 UTC
dbb91c8 rename/adjust css styling for scroll list Maybe we should consolidate styling for all scroll lists 20 May 2024, 13:54:49 UTC
483c059 only render "back to list" button if not `from_panel` i.e.: Do not render the `<- Invocations List` button if you open the invocation state overview from the invocations panel 20 May 2024, 13:54:49 UTC
1244ee1 Add an Invocations Panel 20 May 2024, 13:54:49 UTC
943683b Update lib/galaxy/jobs/runners/drmaa.py Co-authored-by: Nicola Soranzo <nicola.soranzo@gmail.com> 20 May 2024, 11:53:23 UTC
e64b24e Merge pull request #18175 from mvdbeek/downgrade_not_text_file_warning [24.0] Downgrade count lines error to warning 20 May 2024, 11:52:15 UTC
967d39f Merge pull request #18054 from arash77/add_ogg_datatype_media Add support for additional media types 20 May 2024, 11:51:25 UTC
c31098c Merge pull request #18088 from ahmedhamidawan/enhance_invocations_list Change `InvocationsList` into a grid using `GridList` 20 May 2024, 11:50:31 UTC
1e5fe74 Emit warning when user-cancelled job aready complete Seems perfectly reasonable and expected. 20 May 2024, 09:21:52 UTC
5890212 Merge branch 'release_24.0' into dev 20 May 2024, 08:58:54 UTC
5f45575 Downgrade count lines error to warning 20 May 2024, 07:53:06 UTC
3751334 De-duplication of onedata objectstore code. Use caching abstractions and bring in line with other object stores. 19 May 2024, 21:43:38 UTC
9d2a45f Merge pull request #17540 from bwalkowi/add-onedata-objectstore Add onedata objectstore 19 May 2024, 20:41:00 UTC
6fe7c5f Fix mypy error 19 May 2024, 13:16:54 UTC
7f6adf0 Update Python dependencies by running `make update-dependencies`. 19 May 2024, 13:16:13 UTC
70c5648 Fix boto3-stubs typecheck dependency Introduced in commit 36b5ed15fa4a5f9860feaa77dc90832e6bef87b3 . 19 May 2024, 12:15:07 UTC
c9c824a only render `gridHeader` if `!embedded` or if filtering is available 17 May 2024, 22:18:10 UTC
b3acdbd `GridList`: remove padding from sort-by header button 17 May 2024, 22:18:10 UTC
8ab4617 fix action button text for invocations 17 May 2024, 22:18:10 UTC
4f9600c change `<a>` to `<router-link>` 17 May 2024, 22:18:10 UTC
af4d753 adjust selenium for rows per page in grid 17 May 2024, 22:18:10 UTC
55b0973 update navigation schema for removed pagination selectors 17 May 2024, 22:18:10 UTC
03fc36b remove `paginationMixin` and adjust seleniums & nagivation 17 May 2024, 22:18:10 UTC
3d57fdb Change `InvocationsList` into a grid using `GridList` This removes the `InvocationsList` component and instead uses the `GridList`. To make this possible, a few changes were made to the Grid components (such as more field types, non-filterable grid, expandable rows etc.). The invocations list now appears uniform with the other grids due to this change. 17 May 2024, 22:18:10 UTC
e58caaf Merge pull request #18170 from nsoranzo/followup_on_17680 Small refinements and fixes to new release process doc 17 May 2024, 16:38:18 UTC
6a83432 Small refinements and fixes to new release process doc Follow-up on https://github.com/galaxyproject/galaxy/pull/17680 . 17 May 2024, 11:03:06 UTC
d613130 Merge pull request #18169 from davelopez/24.0_fix_invenio_restricted_access_message [24.0] Fix error message when accessing restricted Zenodo records 17 May 2024, 09:48:30 UTC
d6a76f7 Display record URL for verification 17 May 2024, 08:38:46 UTC
7c60446 Fix error message on access to restricted zenodo records 17 May 2024, 08:18:31 UTC
8adfb7e Merge pull request #17680 from dannon/release-management-doc Addition of release process doc 16 May 2024, 18:47:55 UTC
d0f15e8 Merge pull request #18134 from davelopez/display_doi Display DOIs in Archived Histories 16 May 2024, 16:50:49 UTC
440d2db Replace `extra` field directly with `url` For the sake of simplicity 15 May 2024, 16:02:51 UTC
cb9bce4 Merge pull request #18125 from galaxybot/dev_auto_update_dependencies Update Python dependencies 15 May 2024, 15:04:18 UTC
d638bf4 Merge pull request #18156 from mvdbeek/drop_redundant_error_message [24.0] Drop redundant error message 15 May 2024, 14:45:34 UTC
8be09c8 Merge pull request #18136 from jmchilton/object_store_unit_testing More unit testing for object store stuff. 15 May 2024, 14:31:34 UTC
935d048 Adapt client unit tests 15 May 2024, 13:30:55 UTC
aabd492 Use file sources store in composable to reduce requests 15 May 2024, 13:30:55 UTC
4c5f059 Add fileSourcesStore To avoid multiple similar queries to the backend since fileSources are rather static. 15 May 2024, 13:30:54 UTC
f432ddf Refactor rename getFileSources to fetchFileSources To clearly indicate that the function is fetching the file sources from the server and not just returning them from the store. 15 May 2024, 13:30:54 UTC
46a5dcb Remove unused import 15 May 2024, 13:30:53 UTC
1bb0715 Add docs to functions 15 May 2024, 13:30:53 UTC
3e375ca Serialize extra props in the `extra` field 15 May 2024, 13:30:52 UTC
f4db432 Display DOI in archived histories when available 15 May 2024, 13:30:51 UTC
6690ae8 Add ExportRecordDOILink component 15 May 2024, 13:30:51 UTC
5038f70 Add DOILink component 15 May 2024, 13:30:50 UTC
42494b3 Add getFileSourceByUri to file sources composable 15 May 2024, 13:30:50 UTC
65e9797 Refactor extract ArchivedHistoryCard from HistoryArchive 15 May 2024, 13:30:49 UTC
657a8d1 Serialize `url` in RDMFilesSources 15 May 2024, 13:30:49 UTC
6fa98ec Allow to serialize extra properties in FilesSources 15 May 2024, 13:30:48 UTC
5280a79 Merge pull request #18155 from mvdbeek/raise_invalid_request_invalid_url [24.0] Raise ``RequestParameterInvalidException`` when url is invalid 15 May 2024, 13:09:00 UTC
919bf37 Merge pull request #16730 from natefoo/hda-info-no-job Only include tool stdout/stderr in HDA info 15 May 2024, 12:51:29 UTC
7905be9 Update ``playwright_browser`` fixture for pytest-playwright 0.5.0 15 May 2024, 12:45:18 UTC
b1e281c Update Python dependencies 15 May 2024, 12:45:18 UTC
34404bd Drop redundant error message There are only two places in the code where we set the job state to error (https://github.com/galaxyproject/galaxy/blob/ad9271cf6a33cb2e22bd7bed72f901e5215309da/lib/galaxy/jobs/handler.py#L722, https://github.com/galaxyproject/galaxy/blob/ad9271cf6a33cb2e22bd7bed72f901e5215309da/lib/galaxy/jobs/handler.py#L733) and both log more specific log messages. 15 May 2024, 12:20:17 UTC
6b06aac Merge pull request #18151 from mvdbeek/delay_tool_form_rendering_until_config_loaded [24.0] Delay tool form rendering until config is loaded 15 May 2024, 12:17:56 UTC
69e7940 Raise RequestParameterInvalidException when url is invalid Fixes https://github.com/galaxyproject/galaxy/issues/18154 15 May 2024, 11:56:48 UTC
back to top