6e7160b | Marius van den Beek | 22 May 2024, 07:58:17 UTC | Merge pull request #18197 from nsoranzo/update_actions Update versions of GitHub actions | 22 May 2024, 07:58:17 UTC |
4cf305c | Nicola Soranzo | 21 May 2024, 15:47:03 UTC | Use official minikube GitHub action Cannot used the new default driver (`docker`) as it crashes the PostgreSQL Docker container started via job services. | 21 May 2024, 22:37:40 UTC |
94de628 | Nicola Soranzo | 21 May 2024, 11:45:57 UTC | Update versions of GitHub actions | 21 May 2024, 11:45:57 UTC |
4b4a649 | Nicola Soranzo | 21 May 2024, 11:40:22 UTC | Use job permissions instead of token | 21 May 2024, 11:40:22 UTC |
5ac64c8 | Nicola Soranzo | 21 May 2024, 11:31:28 UTC | Remove unnecessary workflow input The branch to run from can be selected from the standard parameters when running a GitHub workflow manually. | 21 May 2024, 11:31:30 UTC |
55a9b9d | Nicola Soranzo | 21 May 2024, 11:29:56 UTC | Update commit message and PR title | 21 May 2024, 11:29:56 UTC |
b56640d | Nicola Soranzo | 21 May 2024, 11:27:51 UTC | Cancel in-progress concurrent builds | 21 May 2024, 11:27:51 UTC |
33380f9 | Marius van den Beek | 21 May 2024, 06:51:53 UTC | Merge pull request #18186 from jdavcs/dev_milestone Change default milestone to target 24.2 | 21 May 2024, 06:51:53 UTC |
bc84ee0 | Marius van den Beek | 21 May 2024, 06:51:32 UTC | Merge pull request #18185 from jdavcs/version-24.2.dev Update version to 24.2.dev | 21 May 2024, 06:51:32 UTC |
0c964b8 | John Davis | 21 May 2024, 02:02:09 UTC | Change default milestone to target 24.2 | 21 May 2024, 02:05:21 UTC |
2514dee | John Davis | 21 May 2024, 01:48:58 UTC | Merge branch 'release_24.1' into 'dev' | 21 May 2024, 01:48:58 UTC |
4555b91 | John Davis | 21 May 2024, 01:48:58 UTC | Update version to 24.1.rc1 | 21 May 2024, 01:48:58 UTC |
9c6caf3 | John Davis | 21 May 2024, 01:48:58 UTC | Update version to 24.2.dev0 | 21 May 2024, 01:48:58 UTC |
d6d3aa5 | John Davis | 21 May 2024, 01:43:14 UTC | Merge remote-tracking branch 'upstream/release_24.0' into dev | 21 May 2024, 01:43:14 UTC |
e796826 | Dannon | 21 May 2024, 00:49:02 UTC | Merge pull request #18183 from jdavcs/dev_dbtags Update db revision 24.1 release tags | 21 May 2024, 00:49:02 UTC |
397b575 | John Davis | 21 May 2024, 00:43:19 UTC | Update db revision 24.1 release tags | 21 May 2024, 00:43:19 UTC |
37551f5 | Ahmed Hamid Awan | 20 May 2024, 20:46:21 UTC | Merge pull request #18181 from jdavcs/240_release_docs_fix [24.0] Fix typos in create release documentation page | 20 May 2024, 20:46:21 UTC |
396797d | John Davis | 20 May 2024, 18:57:49 UTC | Fix typos in release documentation | 20 May 2024, 18:57:49 UTC |
177afd4 | John Davis | 20 May 2024, 18:29:25 UTC | Merge pull request #18172 from jmchilton/file_source_templates_2 Harden User Object Store and File Source Creation | 20 May 2024, 18:29:25 UTC |
9b6268b | John Davis | 20 May 2024, 18:23:04 UTC | Merge pull request #18127 from jmchilton/file_source_templates Empower Users to Bring Their Own Storage and File Sources | 20 May 2024, 18:23:04 UTC |
f3cb81d | John Davis | 20 May 2024, 18:16:28 UTC | Merge pull request #18180 from ahmedhamidawan/enhance_invocations_panel Improve Invocations panel | 20 May 2024, 18:16:28 UTC |
d44cc92 | Ahmed Awan | 20 May 2024, 16:51:32 UTC | show message for no invocations | 20 May 2024, 16:51:32 UTC |
2a92bc1 | John Chilton | 16 May 2024, 16:04:14 UTC | Test user config objects before creating them. Provide detailed error message before proceeding with creation. | 20 May 2024, 16:19:49 UTC |
5cca011 | John Chilton | 17 May 2024, 17:27:03 UTC | Return 204 instead of null from new DELETE endpoints. Again thanks to David! | 20 May 2024, 16:19:02 UTC |
5ab6a42 | John Chilton | 17 May 2024, 17:24:01 UTC | As pointed out by David - doc is optional in plugin, should be in the schema. | 20 May 2024, 16:19:01 UTC |
e86ab18 | John Chilton | 17 May 2024, 17:17:58 UTC | Harden boto3 object store config handling. | 20 May 2024, 16:19:01 UTC |
71ca3d6 | John Chilton | 17 May 2024, 17:06:18 UTC | Fix for boto3 user defined object stores. | 20 May 2024, 16:19:01 UTC |
91a3253 | John Chilton | 17 May 2024, 15:38:11 UTC | Fix filtering in file sources grid. | 20 May 2024, 16:19:01 UTC |
b598bff | John Chilton | 16 May 2024, 16:15:46 UTC | Big warning box about distributed object stores being required. | 20 May 2024, 16:19:01 UTC |
887d26c | John Chilton | 15 May 2024, 14:41:25 UTC | Revise buttons in ConfigTemplates, fill out remove functionality. | 20 May 2024, 16:19:01 UTC |
21ff621 | John Chilton | 14 May 2024, 19:34:30 UTC | More explicit typing around form stuff in config template management. Add URLs where I have them in the dropdown. | 20 May 2024, 16:19:01 UTC |
29ea0ba | John Chilton | 14 May 2024, 13:18:24 UTC | Implement many PR comments around Vue stuff and docs. | 20 May 2024, 16:19:01 UTC |
f95da89 | John Chilton | 20 May 2024, 16:18:47 UTC | Implement file source templates | 20 May 2024, 16:18:47 UTC |
1523ceb | John Chilton | 11 May 2024, 13:25:42 UTC | Migration for user file source templates. | 20 May 2024, 16:16:02 UTC |
d313d67 | John Chilton | 22 April 2024, 14:22:50 UTC | Refine object store templates backend. | 20 May 2024, 16:16:02 UTC |
d3991a6 | John Chilton | 02 May 2024, 19:26:46 UTC | Object Store creation templates. | 20 May 2024, 16:16:02 UTC |
c1f8121 | John Chilton | 27 April 2023, 19:10:08 UTC | Migration for user defined object stores. | 20 May 2024, 16:16:02 UTC |
2f43c32 | John Chilton | 20 May 2024, 16:14:13 UTC | Merge pull request #18003 from mvdbeek/add_galaxy_to_user_agent Add galaxy to user agent | 20 May 2024, 16:14:13 UTC |
4296472 | John Chilton | 20 May 2024, 16:09:10 UTC | Merge pull request #18174 from jmchilton/onedata_deduplication De-duplication of onedata objectstore code. | 20 May 2024, 16:09:10 UTC |
3f82a74 | Marius van den Beek | 20 May 2024, 15:53:28 UTC | Merge pull request #17586 from wm75/empty-bed-lines-fix Set minimal metadata also for empty bed datasets | 20 May 2024, 15:53:28 UTC |
349f9e2 | Marius van den Beek | 20 May 2024, 15:13:11 UTC | Merge pull request #18177 from mvdbeek/dev Merge 24.0 into dev | 20 May 2024, 15:13:11 UTC |
1d345d6 | Dannon | 20 May 2024, 14:54:29 UTC | Merge pull request #18074 from hujambo-dunia/enhance-form-drilldown Enhance form drilldown | 20 May 2024, 14:54:29 UTC |
9843034 | Dannon | 20 May 2024, 14:44:57 UTC | Merge pull request #18137 from ahmedhamidawan/invocations_panel Add an Invocations Panel for the Invocations activity | 20 May 2024, 14:44:57 UTC |
036bf47 | John Davis | 20 May 2024, 14:43:55 UTC | Merge pull request #18173 from nsoranzo/followup_on_18136 Fix boto3-stubs typecheck dependency | 20 May 2024, 14:43:55 UTC |
e46bed1 | John Davis | 20 May 2024, 14:41:33 UTC | Merge pull request #18178 from mvdbeek/downgrade_expected_slurm_things [24.0] Emit warning when user-cancelled job already complete | 20 May 2024, 14:41:33 UTC |
dbb91c8 | Ahmed Awan | 14 May 2024, 16:48:28 UTC | rename/adjust css styling for scroll list Maybe we should consolidate styling for all scroll lists | 20 May 2024, 13:54:49 UTC |
483c059 | Ahmed Awan | 14 May 2024, 16:41:52 UTC | only render "back to list" button if not `from_panel` i.e.: Do not render the `<- Invocations List` button if you open the invocation state overview from the invocations panel | 20 May 2024, 13:54:49 UTC |
1244ee1 | Ahmed Awan | 13 May 2024, 22:33:44 UTC | Add an Invocations Panel | 20 May 2024, 13:54:49 UTC |
943683b | Dannon | 20 May 2024, 11:53:23 UTC | Update lib/galaxy/jobs/runners/drmaa.py Co-authored-by: Nicola Soranzo <nicola.soranzo@gmail.com> | 20 May 2024, 11:53:23 UTC |
e64b24e | Dannon | 20 May 2024, 11:52:15 UTC | Merge pull request #18175 from mvdbeek/downgrade_not_text_file_warning [24.0] Downgrade count lines error to warning | 20 May 2024, 11:52:15 UTC |
967d39f | Dannon | 20 May 2024, 11:51:25 UTC | Merge pull request #18054 from arash77/add_ogg_datatype_media Add support for additional media types | 20 May 2024, 11:51:25 UTC |
c31098c | Dannon | 20 May 2024, 11:50:31 UTC | Merge pull request #18088 from ahmedhamidawan/enhance_invocations_list Change `InvocationsList` into a grid using `GridList` | 20 May 2024, 11:50:31 UTC |
1e5fe74 | mvdbeek | 20 May 2024, 09:21:19 UTC | Emit warning when user-cancelled job aready complete Seems perfectly reasonable and expected. | 20 May 2024, 09:21:52 UTC |
5890212 | mvdbeek | 20 May 2024, 08:58:54 UTC | Merge branch 'release_24.0' into dev | 20 May 2024, 08:58:54 UTC |
5f45575 | mvdbeek | 20 May 2024, 07:53:06 UTC | Downgrade count lines error to warning | 20 May 2024, 07:53:06 UTC |
3751334 | John Chilton | 19 May 2024, 20:56:12 UTC | De-duplication of onedata objectstore code. Use caching abstractions and bring in line with other object stores. | 19 May 2024, 21:43:38 UTC |
9d2a45f | John Chilton | 19 May 2024, 20:41:00 UTC | Merge pull request #17540 from bwalkowi/add-onedata-objectstore Add onedata objectstore | 19 May 2024, 20:41:00 UTC |
6fe7c5f | Nicola Soranzo | 19 May 2024, 13:16:54 UTC | Fix mypy error | 19 May 2024, 13:16:54 UTC |
7f6adf0 | Nicola Soranzo | 19 May 2024, 13:16:11 UTC | Update Python dependencies by running `make update-dependencies`. | 19 May 2024, 13:16:13 UTC |
70c5648 | Nicola Soranzo | 19 May 2024, 12:14:57 UTC | Fix boto3-stubs typecheck dependency Introduced in commit 36b5ed15fa4a5f9860feaa77dc90832e6bef87b3 . | 19 May 2024, 12:15:07 UTC |
c9c824a | Ahmed Awan | 13 May 2024, 21:37:18 UTC | only render `gridHeader` if `!embedded` or if filtering is available | 17 May 2024, 22:18:10 UTC |
b3acdbd | Ahmed Awan | 07 May 2024, 17:31:17 UTC | `GridList`: remove padding from sort-by header button | 17 May 2024, 22:18:10 UTC |
8ab4617 | Ahmed Awan | 07 May 2024, 17:29:05 UTC | fix action button text for invocations | 17 May 2024, 22:18:10 UTC |
4f9600c | Ahmed Awan | 07 May 2024, 16:52:23 UTC | change `<a>` to `<router-link>` | 17 May 2024, 22:18:10 UTC |
af4d753 | Ahmed Awan | 06 May 2024, 16:26:58 UTC | adjust selenium for rows per page in grid | 17 May 2024, 22:18:10 UTC |
55b0973 | Ahmed Awan | 03 May 2024, 16:58:56 UTC | update navigation schema for removed pagination selectors | 17 May 2024, 22:18:10 UTC |
03fc36b | Ahmed Awan | 03 May 2024, 16:48:59 UTC | remove `paginationMixin` and adjust seleniums & nagivation | 17 May 2024, 22:18:10 UTC |
3d57fdb | Ahmed Awan | 02 May 2024, 18:31:40 UTC | Change `InvocationsList` into a grid using `GridList` This removes the `InvocationsList` component and instead uses the `GridList`. To make this possible, a few changes were made to the Grid components (such as more field types, non-filterable grid, expandable rows etc.). The invocations list now appears uniform with the other grids due to this change. | 17 May 2024, 22:18:10 UTC |
e58caaf | Nicola Soranzo | 17 May 2024, 16:38:18 UTC | Merge pull request #18170 from nsoranzo/followup_on_17680 Small refinements and fixes to new release process doc | 17 May 2024, 16:38:18 UTC |
6a83432 | Nicola Soranzo | 17 May 2024, 11:02:18 UTC | Small refinements and fixes to new release process doc Follow-up on https://github.com/galaxyproject/galaxy/pull/17680 . | 17 May 2024, 11:03:06 UTC |
d613130 | Marius van den Beek | 17 May 2024, 09:48:30 UTC | Merge pull request #18169 from davelopez/24.0_fix_invenio_restricted_access_message [24.0] Fix error message when accessing restricted Zenodo records | 17 May 2024, 09:48:30 UTC |
d6a76f7 | davelopez | 17 May 2024, 08:38:46 UTC | Display record URL for verification | 17 May 2024, 08:38:46 UTC |
7c60446 | davelopez | 17 May 2024, 08:18:31 UTC | Fix error message on access to restricted zenodo records | 17 May 2024, 08:18:31 UTC |
8adfb7e | Dannon | 16 May 2024, 18:47:55 UTC | Merge pull request #17680 from dannon/release-management-doc Addition of release process doc | 16 May 2024, 18:47:55 UTC |
d0f15e8 | Dannon | 16 May 2024, 16:50:49 UTC | Merge pull request #18134 from davelopez/display_doi Display DOIs in Archived Histories | 16 May 2024, 16:50:49 UTC |
440d2db | davelopez | 15 May 2024, 16:02:51 UTC | Replace `extra` field directly with `url` For the sake of simplicity | 15 May 2024, 16:02:51 UTC |
cb9bce4 | Nicola Soranzo | 15 May 2024, 15:04:18 UTC | Merge pull request #18125 from galaxybot/dev_auto_update_dependencies Update Python dependencies | 15 May 2024, 15:04:18 UTC |
d638bf4 | Marius van den Beek | 15 May 2024, 14:45:34 UTC | Merge pull request #18156 from mvdbeek/drop_redundant_error_message [24.0] Drop redundant error message | 15 May 2024, 14:45:34 UTC |
8be09c8 | Marius van den Beek | 15 May 2024, 14:31:34 UTC | Merge pull request #18136 from jmchilton/object_store_unit_testing More unit testing for object store stuff. | 15 May 2024, 14:31:34 UTC |
935d048 | davelopez | 14 May 2024, 21:50:11 UTC | Adapt client unit tests | 15 May 2024, 13:30:55 UTC |
aabd492 | davelopez | 14 May 2024, 16:22:06 UTC | Use file sources store in composable to reduce requests | 15 May 2024, 13:30:55 UTC |
4c5f059 | davelopez | 14 May 2024, 16:21:40 UTC | Add fileSourcesStore To avoid multiple similar queries to the backend since fileSources are rather static. | 15 May 2024, 13:30:54 UTC |
f432ddf | davelopez | 14 May 2024, 16:19:07 UTC | Refactor rename getFileSources to fetchFileSources To clearly indicate that the function is fetching the file sources from the server and not just returning them from the store. | 15 May 2024, 13:30:54 UTC |
46a5dcb | davelopez | 14 May 2024, 13:52:04 UTC | Remove unused import | 15 May 2024, 13:30:53 UTC |
1bb0715 | davelopez | 14 May 2024, 13:39:04 UTC | Add docs to functions | 15 May 2024, 13:30:53 UTC |
3e375ca | davelopez | 14 May 2024, 13:38:28 UTC | Serialize extra props in the `extra` field | 15 May 2024, 13:30:52 UTC |
f4db432 | davelopez | 14 May 2024, 11:43:16 UTC | Display DOI in archived histories when available | 15 May 2024, 13:30:51 UTC |
6690ae8 | davelopez | 14 May 2024, 11:42:43 UTC | Add ExportRecordDOILink component | 15 May 2024, 13:30:51 UTC |
5038f70 | davelopez | 14 May 2024, 11:39:38 UTC | Add DOILink component | 15 May 2024, 13:30:50 UTC |
42494b3 | davelopez | 14 May 2024, 11:39:13 UTC | Add getFileSourceByUri to file sources composable | 15 May 2024, 13:30:50 UTC |
65e9797 | davelopez | 13 May 2024, 21:32:40 UTC | Refactor extract ArchivedHistoryCard from HistoryArchive | 15 May 2024, 13:30:49 UTC |
657a8d1 | davelopez | 13 May 2024, 20:53:00 UTC | Serialize `url` in RDMFilesSources | 15 May 2024, 13:30:49 UTC |
6fa98ec | davelopez | 13 May 2024, 20:52:06 UTC | Allow to serialize extra properties in FilesSources | 15 May 2024, 13:30:48 UTC |
5280a79 | Marius van den Beek | 15 May 2024, 13:09:00 UTC | Merge pull request #18155 from mvdbeek/raise_invalid_request_invalid_url [24.0] Raise ``RequestParameterInvalidException`` when url is invalid | 15 May 2024, 13:09:00 UTC |
919bf37 | Dannon | 15 May 2024, 12:51:29 UTC | Merge pull request #16730 from natefoo/hda-info-no-job Only include tool stdout/stderr in HDA info | 15 May 2024, 12:51:29 UTC |
7905be9 | Nicola Soranzo | 15 May 2024, 10:36:21 UTC | Update ``playwright_browser`` fixture for pytest-playwright 0.5.0 | 15 May 2024, 12:45:18 UTC |
b1e281c | galaxybot | 11 May 2024, 03:12:58 UTC | Update Python dependencies | 15 May 2024, 12:45:18 UTC |
34404bd | mvdbeek | 15 May 2024, 12:15:00 UTC | Drop redundant error message There are only two places in the code where we set the job state to error (https://github.com/galaxyproject/galaxy/blob/ad9271cf6a33cb2e22bd7bed72f901e5215309da/lib/galaxy/jobs/handler.py#L722, https://github.com/galaxyproject/galaxy/blob/ad9271cf6a33cb2e22bd7bed72f901e5215309da/lib/galaxy/jobs/handler.py#L733) and both log more specific log messages. | 15 May 2024, 12:20:17 UTC |
6b06aac | John Chilton | 15 May 2024, 12:17:56 UTC | Merge pull request #18151 from mvdbeek/delay_tool_form_rendering_until_config_loaded [24.0] Delay tool form rendering until config is loaded | 15 May 2024, 12:17:56 UTC |
69e7940 | mvdbeek | 15 May 2024, 11:56:44 UTC | Raise RequestParameterInvalidException when url is invalid Fixes https://github.com/galaxyproject/galaxy/issues/18154 | 15 May 2024, 11:56:48 UTC |