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Revision 709eaa23c1c245c9485cdeeacaf73aa18811e9e7 authored by coke6162 on 24 February 2023, 19:54:18 UTC, committed by coke6162 on 24 February 2023, 19:54:18 UTC
updated to clarify Qiao vs McCann
1 parent 38c0972
History
FileModeSize
B2_GAS_whisker.R -rw-r--r--1.8 KB
B2_Mm2_control_no_STAT1_or_CTCF_shuf1000.bed -rw-r--r--37.7 KB
B2_Mm2_gual_BMDM_shNT_UT_CTCF_intersected_only.bed -rw-r--r--158.6 KB
B2_Mm2_heatmap.sbatch -rw-r--r--2.8 KB
B2_Mm2_picc_BMDM_WT_IFNG_2h_STAT1_intersected_and_CTCF.bed -rw-r--r--34.3 KB
B2_Mm2_picc_BMDM_WT_IFNG_2h_STAT1_intersected_only.bed -rw-r--r--45.7 KB
MA0137.3.meme -rw-r--r--675 bytes
README.md -rw-r--r--6.5 KB
bbduk.sbatch -rw-r--r--1.0 KB
bdg_to_bigwig.sbatch -rw-r--r--1.3 KB
bedtools_closest_nearest_neighbor.sbatch -rw-r--r--4.8 KB
bwa.sbatch -rw-r--r--1.6 KB
fastqc.sbatch -rw-r--r--775 bytes
filter_giggle_results.sh -rw-r--r--2.1 KB
fimo_pval_1.sbatch -rw-r--r--1015 bytes
get_fimo_pval_box_whisker.sbatch -rw-r--r--2.7 KB
get_overlapping_B2_box_whisker.sbatch -rw-r--r--3.1 KB
get_overlapping_B2_heatmap.sbatch -rw-r--r--2.7 KB
get_overlapping_B2_nearest_neighbor.sbatch -rw-r--r--3.9 KB
giggle_bubbles.py -rw-r--r--1.6 KB
giggle_index.sbatch -rw-r--r--1.9 KB
giggle_search.sbatch -rw-r--r--2.0 KB
intersect_peak_replicates.sbatch -rw-r--r--2.1 KB
macs2_cuartero.sbatch -rw-r--r--1.1 KB
macs2_gualdrini.sbatch -rw-r--r--1.1 KB
macs2_piccolo.sbatch -rw-r--r--2.1 KB
macs2_platanitis.sbatch -rw-r--r--1.7 KB
multiqc.sbatch -rw-r--r--906 bytes
nearest_neighbor_histograms_piccolo_IFNG_2h_vs_UT.R -rw-r--r--15.2 KB
nearest_neighbor_histograms_piccolo_IFNG_4h_vs_UT.R -rw-r--r--15.2 KB
nearest_neighbor_histograms_platanitis_IFNG_2h_vs_UT.R -rw-r--r--15.3 KB
overlap_TEs_STAT1_summits.sbatch -rw-r--r--2.1 KB
remove_duplicates.sbatch -rw-r--r--2.3 KB
sample_names.txt -rw-r--r--454 bytes
sort_bed.sh -rw-r--r--786 bytes
xstreme.sbatch -rw-r--r--1.2 KB

README.md

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