Revision 70c78234182d797294d831d9a66961bfb278bceb authored by heisterm on 13 January 2015, 09:45:27 UTC, committed by heisterm on 13 January 2015, 09:45:27 UTC
The example (attenuation_correction_example.py) has the same content as the tutorial.
Just the code is organised a little different.
1 parent 06e4219
Raw File
comp.py
#-------------------------------------------------------------------------------
# Name:        comp
# Purpose:
#
# Authors:     Maik Heistermann, Stephan Jacobi and Thomas Pfaff
#
# Created:     26.10.2011
# Copyright:   (c) Maik Heistermann, Stephan Jacobi and Thomas Pfaff 2011
# Licence:     The MIT License
#-------------------------------------------------------------------------------
#!/usr/bin/env python

"""
Composition
^^^^^^^^^^^

Combine data from different radar locations on one common set of locations

.. autosummary::
   :nosignatures:
   :toctree: generated/

   extract_circle
   togrid
   compose_ko
   compose_weighted

"""
import numpy as np
import wradlib.ipol as ipol

##from scipy.spatial import KDTree
##def extract_circle(center, radius, coords):
##    """
##    Extract the indices of coords which fall within a circle
##    defined by center and radius
##
##    Parameters
##    ----------
##    center : float
##    radius : float
##    coords : array of float with shape (numpoints,2)
##
##    Returns
##    -------
##    output : 1-darray of integers
##        index array referring to the coords array
##
##    """
##    print 'Building tree takes:'
##    t0 = dt.datetime.now()
##    tree = KDTree(coords)
##    print dt.datetime.now() - t0
##    print 'Query tree takes:'
##    t0 = dt.datetime.now()
##    ix = tree.query(center, k=len(coords), distance_upper_bound=radius)[1]
##    print dt.datetime.now() - t0
##    ix = ix[np.where(ix<len(coords))[0]]
##    return ix

def extract_circle(center, radius, coords):
    """
    Extract the indices of coords which fall within a circle
    defined by center and radius

    Parameters
    ----------
    center : float
    radius : float
    coords : array of float with shape (numpoints,2)

    Returns
    -------
    output : 1-darray of integers
        index array referring to the coords array

    """
    return np.where( ((coords-center)**2).sum(axis=-1) < radius**2 )[0]


def togrid(src, trg, radius, center, data, interpol, *args, **kwargs):
    """
    Interpolate data from a radar location to the composite grid or set of \
    locations

    Parameters
    ----------
    src : ndarray of float of shape (numpoints, ndim)
        cartesian x / y coordinates of the radar bins
    trg : ndarray of float of shape (numpoints, ndim)
        cartesian x / y coordinates of the composite
    radius : float
        the radius of the radar circle (same units as src and trg)
    center : array of float
        the location coordinates of the radar
    data : ndarray of float
        the data that should be transferred to composite
    interpol : an interpolation class name from wradlib.ipol - e.g. Nearest or
       Idw
    *args : arguments of Interpolator (see class documentation)
    **kwargs : keyword arguments of Interpolator (see class documentation)

    Returns
    -------
    output : ndarray of float
        data of the radar circle which is interpolated on the composite grid

    """
    # get indices to select the subgrid from the composite grid
    ix = extract_circle(center, radius, trg)
    # interpolate on subgrid
    ip = interpol(src, trg[ix], *args, **kwargs)
    data_on_subgrid = ip(data).reshape( (len(ix),-1) )
    # create container for entire grid
    composegridshape = [len(trg)]
    composegridshape.extend(data.shape[1:])
    compose_grid = np.repeat( np.nan, len(trg)*np.prod(data.shape[1:]) ).reshape( composegridshape )
    # push subgrid results into the large grid
    compose_grid[ix] = data_on_subgrid
    return compose_grid


def compose_ko(radargrids, qualitygrids):
    """Composes grids according to quality information using quality \
    information as a knockout criterion.

    The value of the composed pixel is taken from the radargrid whose
    quality grid has the highest value.

    Parameters
    ----------
    radargrids : list of arrays
        radar data to be composited. Each item in the list corresponds to the
        data of one radar location. All items must have the same shape.
    qualitygrids : list of arrays
        quality data to decide upon which radar site will contribute its pixel
        to the composite. Then length of this list must be the same as that
        of `radargrids`. All items must have the same shape and be aligned with
        the items in `radargrids`.


    Returns
    -------
    composite : array

    """
    # first add a fallback array for all pixels having missing values in all
    # radargrids
    radarfallback = (np.repeat(np.nan, np.prod(radargrids[0].shape))
                          .reshape(radargrids[0].shape))
    radargrids.append(radarfallback)
    radarinfo = np.array(radargrids)
    # then do the same for the quality grids
    qualityfallback = (np.repeat(-np.inf, np.prod(radargrids[0].shape))
                            .reshape(radargrids[0].shape))
    qualitygrids.append(qualityfallback)
    qualityinfo = np.array(qualitygrids)

    select = np.nanargmax(qualityinfo, axis=0)
    composite = (radarinfo.reshape((radarinfo.shape[0],-1))
                   [select.ravel(), np.arange(np.prod(radarinfo.shape[1:]))]
                      .reshape(radarinfo.shape[1:])
                )
    radargrids.pop()
    qualitygrids.pop()

    return composite


def compose_weighted(radargrids, qualitygrids):
    """Composes grids according to quality information using a weighted \
    averaging approach.

    The value of the composed pixel is the weighted average of all radar
    pixels with the quality values being the weights.

    Parameters
    ----------
    radargrids : list of arrays
    qualitygrids : list of arrays

    Returns
    -------
    composite : array

    See Also
    --------
    compose_ko : for more description about the shape of the input arrays

    """
    radarinfo = np.array(radargrids)
    qualityinfo = np.array(qualitygrids)

    qualityinfo /= np.nansum(qualityinfo, axis=0)

    composite = np.nansum(radarinfo*qualityinfo, axis=0)

    return composite


if __name__ == '__main__':
    print 'wradlib: Calling module <comp> as main...'
    import numpy as np
    import datetime as dt
    import pylab as pl


    radarcoords = np.loadtxt('../examples/data/bin_coords_tur.gz')
    center = radarcoords.mean(axis=0)

    coords = np.meshgrid(np.linspace(center[0]-3e5,center[0]+3e5,900), np.linspace(center[1]-3e5,center[1]+3e5,900))
    coords = np.vstack((coords[0].ravel(), coords[1].ravel())).transpose()

    #center = np.array([500.,500.])
    radius = 128000.

    radardata = np.loadtxt('../examples/data/polar_R_tur.gz').ravel()
##    t0 = dt.datetime.now()
##    ix = extract_circle(center, radius, coords)
##    print dt.datetime.now() - t0

    t0 = dt.datetime.now()
    test = togrid(radarcoords, coords, radius, center, radardata, ipol.Nearest)
    print dt.datetime.now() - t0

    pl.imshow(test.reshape((900,900)))

##    print len(ix)
##    print ix

##    pl.scatter(coords[ix,0], coords[ix,1])
    pl.show()
    pl.close()



back to top